Publications


Authors: Type:

2017

  • [DOI] P. L. Chu, C. Vanderghem, H. L. MacLean, and B. A. Saville, “Process modeling of hydrodeoxygenation to produce renewable jet fuel and other hydrocarbon fuels,” Fuel, vol. 196, pp. 298-305, 2017.
    [Bibtex]
    @article{chu_process_2017,
    title = {Process modeling of hydrodeoxygenation to produce renewable jet fuel and other hydrocarbon fuels},
    volume = {196},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85012074001&doi=10.1016%2fj.fuel.2017.01.097&partnerID=40&md5=ba31d4d1c68e0bc7ac1dc644294d4e2a},
    doi = {10.1016/j.fuel.2017.01.097},
    journal = {Fuel},
    author = {Chu, P. L. and Vanderghem, C. and MacLean, H. L. and Saville, B. A.},
    year = {2017},
    pages = {298--305}
    }
  • [DOI] S. Garg, V. Papangelakis, E. Edwards, and R. Mahadevan, “Application of a selective dissolution protocol to quantify the terminal dissolution extents of pyrrhotite and pentlandite from pyrrhotite tailings,” International journal of mineral processing, vol. 158, pp. 27-34, 2017.
    [Bibtex]
    @article{garg_application_2017,
    title = {Application of a selective dissolution protocol to quantify the terminal dissolution extents of pyrrhotite and pentlandite from pyrrhotite tailings},
    volume = {158},
    issn = {03017516 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84997610874&doi=10.1016%2fj.minpro.2016.11.004&partnerID=40&md5=7d66b41934fd4c344be51e45d2c77aa6},
    doi = {10.1016/j.minpro.2016.11.004},
    journal = {International Journal of Mineral Processing},
    author = {Garg, S. and Papangelakis, V. and Edwards, E. and Mahadevan, R.},
    year = {2017},
    pages = {27--34}
    }
  • J. C. Joo, A. N. Khusnutdinova, R. Flick, T. Kim, U. T. Bornscheuer, A. F. Yakunin, and R. Mahadevan, “Alkene hydrogenation activity of enoate reductases for an environmentally benign biosynthesis of adipic acid,” Chemical science, 2017.
    [Bibtex]
    @article{joo_alkene_2017,
    title = {Alkene hydrogenation activity of enoate reductases for an environmentally benign biosynthesis of adipic acid},
    journal = {Chemical Science},
    author = {Joo, Jeong Chan and Khusnutdinova, Anna N and Flick, Robert and Kim, Taeho and Bornscheuer, Uwe T and Yakunin, Alexander F and Mahadevan, Radhakrishnan},
    year = {2017}
    }
  • [DOI] J. C. Joo, A. N. Khusnutdinova, R. Flick, T. Kim, U. T. Bornscheuer, A. F. Yakunin, and R. Mahadevan, “Alkene hydrogenation activity of enoate reductases for an environmentally benign biosynthesis of adipic acid,” Chemical science, vol. 8, iss. 2, pp. 1406-1413, 2017.
    [Bibtex]
    @article{joo_alkene_2017-1,
    title = {Alkene hydrogenation activity of enoate reductases for an environmentally benign biosynthesis of adipic acid},
    volume = {8},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85011060324&doi=10.1039%2fc6sc02842j&partnerID=40&md5=0c7711a1c0af3f5a6c8dd337cec21989},
    doi = {10.1039/c6sc02842j},
    number = {2},
    journal = {Chemical Science},
    author = {Joo, J. C. and Khusnutdinova, A. N. and Flick, R. and Kim, T. and Bornscheuer, U. T. and Yakunin, A. F. and Mahadevan, R.},
    year = {2017},
    pages = {1406--1413}
    }
  • [DOI] E. J. T. McGee, A. R. Sangakkara, and L. L. Diosady, “Double fortification of salt with folic acid and iodine,” Journal of food engineering, vol. 198, pp. 72-80, 2017.
    [Bibtex]
    @article{mcgee_double_2017,
    title = {Double fortification of salt with folic acid and iodine},
    volume = {198},
    issn = {02608774 (ISSN)},
    doi = {10.1016/j.jfoodeng.2016.11.019},
    journal = {Journal of Food Engineering},
    author = {McGee, E. J. T. and Sangakkara, A. R. and Diosady, L. L.},
    year = {2017},
    pages = {72--80}
    }
  • [DOI] S. Sinichi, D. G. B. Boocock, and L. L. Diosady, “Production of Isopropyl and Methyl Esters from Yellow Mustard Oil/IPA Miscellas,” Jaocs, journal of the american oil chemists’ society, pp. 1-11, 2017.
    [Bibtex]
    @article{sinichi_production_2017,
    title = {Production of {Isopropyl} and {Methyl} {Esters} from {Yellow} {Mustard} {Oil}/{IPA} {Miscellas}},
    issn = {0003021X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85009284537&doi=10.1007%2fs11746-016-2942-2&partnerID=40&md5=4d023b82c8a754e2ae5f8d573ab1ee2f},
    doi = {10.1007/s11746-016-2942-2},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    author = {Sinichi, S. and Boocock, D. G. B. and Diosady, L. L.},
    year = {2017},
    pages = {1--11}
    }
  • [DOI] T. V. Vuong, B. Liu, M. Sandgren, and E. R. Master, “Microplate-Based Detection of Lytic Polysaccharide Monooxygenase Activity by Fluorescence-Labeling of Insoluble Oxidized Products,” Biomacromolecules, vol. 18, iss. 2, pp. 610-616, 2017.
    [Bibtex]
    @article{vuong_microplate-based_2017,
    title = {Microplate-{Based} {Detection} of {Lytic} {Polysaccharide} {Monooxygenase} {Activity} by {Fluorescence}-{Labeling} of {Insoluble} {Oxidized} {Products}},
    volume = {18},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85012247679&doi=10.1021%2facs.biomac.6b01790&partnerID=40&md5=d05310138517c6aa2d70b9651db1e122},
    doi = {10.1021/acs.biomac.6b01790},
    number = {2},
    journal = {Biomacromolecules},
    author = {Vuong, T. V. and Liu, B. and Sandgren, M. and Master, E. R.},
    year = {2017},
    pages = {610--616}
    }

2016

  • [DOI] S. Bonilla T and D. G. Allen, “Flocculation with Lysozyme: A Non-Enzymatic Application,” Canadian journal of chemical engineering, vol. 94, iss. 2, pp. 231-237, 2016.
    [Bibtex]
    @article{bonilla_t_flocculation_2016,
    title = {Flocculation with {Lysozyme}: {A} {Non}-{Enzymatic} {Application}},
    volume = {94},
    issn = {00084034 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84955326890&doi=10.1002%2fcjce.22386&partnerID=40&md5=cbbc0d262227b6e52099f8b3fbf20713},
    doi = {10.1002/cjce.22386},
    number = {2},
    journal = {Canadian Journal of Chemical Engineering},
    author = {Bonilla T, S. and Allen, D. G.},
    year = {2016},
    pages = {231--237}
    }
  • [DOI] S. Chen, C. E. White, G. C. diCenzo, Y. Zhang, P. J. Stogios, A. Savchenko, and T. M. Finan, “L-Hydroxyproline and D-proline catabolism in Sinorhizobium meliloti,” Journal of bacteriology, vol. 198, iss. 7, pp. 1171-1181, 2016.
    [Bibtex]
    @article{chen_l-hydroxyproline_2016,
    title = {L-{Hydroxyproline} and {D}-proline catabolism in {Sinorhizobium} meliloti},
    volume = {198},
    issn = {00219193 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84961171343&doi=10.1128%2fJB.00961-15&partnerID=40&md5=e01479cac58d80407cb7f307eeca86bd},
    doi = {10.1128/JB.00961-15},
    number = {7},
    journal = {Journal of Bacteriology},
    author = {Chen, S. and White, C. E. and diCenzo, G. C. and Zhang, Y. and Stogios, P. J. and Savchenko, A. and Finan, T. M.},
    year = {2016},
    pages = {1171--1181}
    }
  • [DOI] P. L. Chu, C. Vanderghem, H. L. MacLean, and B. A. Saville, “Financial analysis and risk assessment of hydroprocessed renewable jet fuel production from camelina, carinata and used cooking oil,” Applied energy, 2016.
    [Bibtex]
    @article{chu_financial_2016,
    title = {Financial analysis and risk assessment of hydroprocessed renewable jet fuel production from camelina, carinata and used cooking oil},
    issn = {03062619 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85008146710&doi=10.1016%2fj.apenergy.2016.12.001&partnerID=40&md5=9723d610b3a44141c120951127dca211},
    doi = {10.1016/j.apenergy.2016.12.001},
    journal = {Applied Energy},
    author = {Chu, P. L. and Vanderghem, C. and MacLean, H. L. and Saville, B. A.},
    year = {2016}
    }
  • [DOI] V. Dueik and L. L. Diosady, “Microencapsulation of iron in a reversed enteric coating using spray drying technology for double fortification of salt with iodine and iron,” Journal of food process engineering, 2016.
    [Bibtex]
    @article{dueik_microencapsulation_2016,
    title = {Microencapsulation of iron in a reversed enteric coating using spray drying technology for double fortification of salt with iodine and iron},
    issn = {01458876 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84960333782&doi=10.1111%2fjfpe.12376&partnerID=40&md5=adbd7d7e65a4c6660c6ead74c8df15cc},
    doi = {10.1111/jfpe.12376},
    journal = {Journal of Food Process Engineering},
    author = {Dueik, V. and Diosady, L. L.},
    year = {2016}
    }
  • [DOI] C. K. Euler and R. Mahadevan, “Protein-Level Control of Metabolism: Design Principles and Prospects from a Representative System,” Ifac-papersonline, vol. 49, iss. 26, pp. 165-170, 2016.
    [Bibtex]
    @article{euler_protein-level_2016,
    title = {Protein-{Level} {Control} of {Metabolism}: {Design} {Principles} and {Prospects} from a {Representative} {System}},
    volume = {49},
    issn = {24058963 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85008395826&doi=10.1016%2fj.ifacol.2016.12.120&partnerID=40&md5=30d84762229cfa11831d57cd43ef28c7},
    doi = {10.1016/j.ifacol.2016.12.120},
    number = {26},
    journal = {IFAC-PapersOnLine},
    author = {Euler, C. K. and Mahadevan, R.},
    year = {2016},
    pages = {165--170}
    }
  • T. M. Fitamo, O. Dahl, E. Master, and T. Meyer, “Biochemical methane potential of kraft bleaching effluent and codigestion with other in-mill streams,” Tappi journal, vol. 15, iss. 2, pp. 80-88, 2016.
    [Bibtex]
    @article{fitamo_biochemical_2016,
    title = {Biochemical methane potential of kraft bleaching effluent and codigestion with other in-mill streams},
    volume = {15},
    issn = {07341415 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84960840201&partnerID=40&md5=7180d2814c99564dc4b49380033f0378},
    number = {2},
    journal = {Tappi Journal},
    author = {Fitamo, T. M. and Dahl, O. and Master, E. and Meyer, T.},
    year = {2016},
    pages = {80--88}
    }
  • [DOI] A. Gagarinova, G. Stewart, B. Samanfar, S. Phanse, C. A. White, H. Aoki, V. Deineko, N. Beloglazova, A. F. Yakunin, A. Golshani, E. D. Brown, M. Babu, and A. Emili, “Systematic Genetic Screens Reveal the Dynamic Global Functional Organization of the Bacterial Translation Machinery,” Cell reports, vol. 17, iss. 3, pp. 904-916, 2016.
    [Bibtex]
    @article{gagarinova_systematic_2016,
    title = {Systematic {Genetic} {Screens} {Reveal} the {Dynamic} {Global} {Functional} {Organization} of the {Bacterial} {Translation} {Machinery}},
    volume = {17},
    issn = {22111247 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84992176751&doi=10.1016%2fj.celrep.2016.09.040&partnerID=40&md5=6a28baa6a82ee7c211b0a62317e98767},
    doi = {10.1016/j.celrep.2016.09.040},
    number = {3},
    journal = {Cell Reports},
    author = {Gagarinova, A. and Stewart, G. and Samanfar, B. and Phanse, S. and White, C. A. and Aoki, H. and Deineko, V. and Beloglazova, N. and Yakunin, A. F. and Golshani, A. and Brown, E. D. and Babu, M. and Emili, A.},
    year = {2016},
    pages = {904--916}
    }
  • [DOI] K. Gerbrandt, P. L. Chu, A. Simmonds, K. A. Mullins, H. L. MacLean, W. M. Griffin, and B. A. Saville, “Life cycle assessment of lignocellulosic ethanol: A review of key factors and methods affecting calculated GHG emissions and energy use,” Current opinion in biotechnology, vol. 38, pp. 63-70, 2016.
    [Bibtex]
    @article{gerbrandt_life_2016,
    title = {Life cycle assessment of lignocellulosic ethanol: {A} review of key factors and methods affecting calculated {GHG} emissions and energy use},
    volume = {38},
    issn = {09581669 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84955117470&doi=10.1016%2fj.copbio.2015.12.021&partnerID=40&md5=10e5422ec95d5488edce29c4a9390e53},
    doi = {10.1016/j.copbio.2015.12.021},
    journal = {Current Opinion in Biotechnology},
    author = {Gerbrandt, K. and Chu, P. L. and Simmonds, A. and Mullins, K. A. and MacLean, H. L. and Griffin, W. M. and Saville, B. A.},
    year = {2016},
    pages = {63--70}
    }
  • W. M. Griffin, B. A. Saville, and H. L. MacLean, “Ethanol Use in the United States: Status, Threats and the Potential Future,” in Global Bioethanol: Evolution, Risks, and Uncertainties, Elsevier Inc., 2016, pp. 34-62.
    [Bibtex]
    @incollection{griffin_ethanol_2016,
    title = {Ethanol {Use} in the {United} {States}: {Status}, {Threats} and the {Potential} {Future}},
    isbn = {9780128031568 (ISBN); 9780128031414 (ISBN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84987792349&doi=10.1016%2fB978-0-12-803141-4.00002-2&partnerID=40&md5=2565816b48eb823b6048830664013718},
    booktitle = {Global {Bioethanol}: {Evolution}, {Risks}, and {Uncertainties}},
    publisher = {Elsevier Inc.},
    author = {Griffin, W. M. and Saville, B. A. and MacLean, H. L.},
    year = {2016},
    note = {DOI: 10.1016/B978-0-12-803141-4.00002-2},
    pages = {34--62}
    }
  • [DOI] M. Hajighasemi, B. P. Nocek, A. Tchigvintsev, G. Brown, R. Flick, X. Xu, H. Cui, T. Hai, A. Joachimiak, P. N. Golyshin, A. Savchenko, E. A. Edwards, and A. F. Yakunin, “Biochemical and Structural Insights into Enzymatic Depolymerization of Polylactic Acid and Other Polyesters by Microbial Carboxylesterases,” Biomacromolecules, vol. 17, iss. 6, pp. 2027-2039, 2016.
    [Bibtex]
    @article{hajighasemi_biochemical_2016,
    title = {Biochemical and {Structural} {Insights} into {Enzymatic} {Depolymerization} of {Polylactic} {Acid} and {Other} {Polyesters} by {Microbial} {Carboxylesterases}},
    volume = {17},
    issn = {15257797 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84974851169&doi=10.1021%2facs.biomac.6b00223&partnerID=40&md5=818b16453c413e81f50eaa38c7d9d374},
    doi = {10.1021/acs.biomac.6b00223},
    number = {6},
    journal = {Biomacromolecules},
    author = {Hajighasemi, M. and Nocek, B. P. and Tchigvintsev, A. and Brown, G. and Flick, R. and Xu, X. and Cui, H. and Hai, T. and Joachimiak, A. and Golyshin, P. N. and Savchenko, A. and Edwards, E. A. and Yakunin, A. F.},
    year = {2016},
    pages = {2027--2039}
    }
  • [DOI] L. Huang, A. Khusnutdinova, B. Nocek, G. Brown, X. Xu, H. Cui, P. Petit, R. Flick, R. Zallot, K. Balmant, M. J. Ziemak, J. Shanklin, V. De Crécy-Lagard, O. Fiehn, J. F. Gregory, A. Joachimiak, A. Savchenko, A. F. Yakunin, and A. D. Hanson, “A family of metal-dependent phosphatases implicated in metabolite damage-control,” Nature chemical biology, vol. 12, iss. 8, pp. 621-627, 2016.
    [Bibtex]
    @article{huang_family_2016,
    title = {A family of metal-dependent phosphatases implicated in metabolite damage-control},
    volume = {12},
    issn = {15524450 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84975290954&doi=10.1038%2fnchembio.2108&partnerID=40&md5=55cfdd39c3b6dd9637ace45743810772},
    doi = {10.1038/nchembio.2108},
    number = {8},
    journal = {Nature Chemical Biology},
    author = {Huang, L. and Khusnutdinova, A. and Nocek, B. and Brown, G. and Xu, X. and Cui, H. and Petit, P. and Flick, R. and Zallot, R. and Balmant, K. and Ziemak, M. J. and Shanklin, J. and De Crécy-Lagard, V. and Fiehn, O. and Gregory, J. F. and Joachimiak, A. and Savchenko, A. and Yakunin, A. F. and Hanson, A. D.},
    year = {2016},
    pages = {621--627}
    }
  • [DOI] M. A. Islam, A. Tchigvintsev, V. Yim, A. Savchenko, A. F. Yakunin, R. Mahadevan, and E. A. Edwards, “Experimental validation of in silico model-predicted isocitrate dehydrogenase and phosphomannose isomerase from Dehalococcoides mccartyi,” Microbial biotechnology, vol. 9, iss. 1, pp. 47-60, 2016.
    [Bibtex]
    @article{islam_experimental_2016,
    title = {Experimental validation of in silico model-predicted isocitrate dehydrogenase and phosphomannose isomerase from {Dehalococcoides} mccartyi},
    volume = {9},
    issn = {17517907 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84953351425&doi=10.1111%2f1751-7915.12315&partnerID=40&md5=3284b273515f3325c2f7a1919bbcb41f},
    doi = {10.1111/1751-7915.12315},
    number = {1},
    journal = {Microbial Biotechnology},
    author = {Islam, M. A. and Tchigvintsev, A. and Yim, V. and Savchenko, A. and Yakunin, A. F. and Mahadevan, R. and Edwards, E. A.},
    year = {2016},
    pages = {47--60}
    }
  • [DOI] C. M. D. Kocur, L. Lomheim, O. Molenda, K. P. Weber, L. M. Austrins, B. E. Sleep, H. K. Boparai, E. A. Edwards, and D. M. O’Carroll, “Long-Term Field Study of Microbial Community and Dechlorinating Activity Following Carboxymethyl Cellulose-Stabilized Nanoscale Zero-Valent Iron Injection,” Environmental science and technology, vol. 50, iss. 14, pp. 7658-7670, 2016.
    [Bibtex]
    @article{kocur_long-term_2016,
    title = {Long-{Term} {Field} {Study} of {Microbial} {Community} and {Dechlorinating} {Activity} {Following} {Carboxymethyl} {Cellulose}-{Stabilized} {Nanoscale} {Zero}-{Valent} {Iron} {Injection}},
    volume = {50},
    issn = {0013936X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84978886843&doi=10.1021%2facs.est.6b01745&partnerID=40&md5=f577fcc1e8dfd797cf942492e0f46a21},
    doi = {10.1021/acs.est.6b01745},
    number = {14},
    journal = {Environmental Science and Technology},
    author = {Kocur, C. M. D. and Lomheim, L. and Molenda, O. and Weber, K. P. and Austrins, L. M. and Sleep, B. E. and Boparai, H. K. and Edwards, E. A. and O'Carroll, D. M.},
    year = {2016},
    pages = {7658--7670}
    }
  • [DOI] A. Kumar, N. Beloglazova, C. Bundalovic-Torma, S. Phanse, V. Deineko, A. Gagarinova, G. Musso, J. Vlasblom, S. Lemak, M. Hooshyar, Z. Minic, O. Wagih, R. Mosca, P. Aloy, A. Golshani, J. Parkinson, A. Emili, A. F. Yakunin, and M. Babu, “Conditional Epistatic Interaction Maps Reveal Global Functional Rewiring of Genome Integrity Pathways in Escherichia coli,” Cell reports, vol. 14, iss. 3, pp. 648-661, 2016.
    [Bibtex]
    @article{kumar_conditional_2016,
    title = {Conditional {Epistatic} {Interaction} {Maps} {Reveal} {Global} {Functional} {Rewiring} of {Genome} {Integrity} {Pathways} in {Escherichia} coli},
    volume = {14},
    issn = {22111247 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84953449542&doi=10.1016%2fj.celrep.2015.12.060&partnerID=40&md5=7a9a3efd000187d266144706e0f134ae},
    doi = {10.1016/j.celrep.2015.12.060},
    number = {3},
    journal = {Cell Reports},
    author = {Kumar, A. and Beloglazova, N. and Bundalovic-Torma, C. and Phanse, S. and Deineko, V. and Gagarinova, A. and Musso, G. and Vlasblom, J. and Lemak, S. and Hooshyar, M. and Minic, Z. and Wagih, O. and Mosca, R. and Aloy, P. and Golshani, A. and Parkinson, J. and Emili, A. and Yakunin, A. F. and Babu, M.},
    year = {2016},
    pages = {648--661}
    }
  • [DOI] J. M. Luk, B. A. Saville, and H. L. MacLean, “Impact of non-petroleum vehicle fuel economy on GHG mitigation potential,” Environmental research letters, vol. 11, iss. 4, 2016.
    [Bibtex]
    @article{luk_impact_2016,
    title = {Impact of non-petroleum vehicle fuel economy on {GHG} mitigation potential},
    volume = {11},
    issn = {17489318 (ISSN)},
    doi = {10.1088/1748-9326/11/4/044001},
    number = {4},
    journal = {Environmental Research Letters},
    author = {Luk, J. M. and Saville, B. A. and MacLean, H. L.},
    year = {2016}
    }
  • [DOI] J. M. Luk, B. A. Saville, and H. L. MacLean, “Vehicle attribute trade-offs to meet the 2025 CAFE fuel economy target,” Transportation research part d: transport and environment, vol. 49, pp. 154-171, 2016.
    [Bibtex]
    @article{luk_vehicle_2016,
    title = {Vehicle attribute trade-offs to meet the 2025 {CAFE} fuel economy target},
    volume = {49},
    issn = {13619209 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84988602866&doi=10.1016%2fj.trd.2016.09.005&partnerID=40&md5=161dd1e6f5bf8d97af53bb82e7bb6430},
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    journal = {Transportation Research Part D: Transport and Environment},
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    @article{luo_cultivating_2016,
    title = {Cultivating microbial dark matter in benzene-degrading methanogenic consortia},
    volume = {18},
    issn = {14622912 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84987624172&doi=10.1111%2f1462-2920.13121&partnerID=40&md5=9bb03a0c4299b12a601c9a69298ebc13},
    doi = {10.1111/1462-2920.13121},
    number = {9},
    journal = {Environmental Microbiology},
    author = {Luo, F. and Devine, C. E. and Edwards, E. A.},
    year = {2016},
    pages = {2923--2936}
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    @article{macdonald_comparative_2016,
    title = {Comparative analysis of lignin peroxidase and manganese peroxidase activity on coniferous and deciduous wood using {ToF}-{SIMS}},
    issn = {01757598 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84965013562&doi=10.1007%2fs00253-016-7560-2&partnerID=40&md5=6fa6b18f9cb7a531e54a9c1c9530f3a2},
    doi = {10.1007/s00253-016-7560-2},
    journal = {Applied Microbiology and Biotechnology},
    author = {MacDonald, J. and Goacher, R. E. and Abou-Zaid, M. and Master, E. R.},
    year = {2016},
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    @article{mayer-blackwell_12-dichloroethane_2016,
    title = {1,2-{Dichloroethane} {Exposure} {Alters} the {Population} {Structure}, {Metabolism}, and {Kinetics} of a {Trichloroethene}-{Dechlorinating} {Dehalococcoides} mccartyi {Consortium}},
    volume = {50},
    issn = {0013936X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84995677715&doi=10.1021%2facs.est.6b02957&partnerID=40&md5=e2a969ede3d81407c978c5d632eacb0d},
    doi = {10.1021/acs.est.6b02957},
    number = {22},
    journal = {Environmental Science and Technology},
    author = {Mayer-Blackwell, K. and Fincker, M. and Molenda, O. and Callahan, B. and Sewell, H. and Holmes, S. and Edwards, E. A. and Spormann, A. M.},
    year = {2016},
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    @article{mcgregor_structure-function_2016,
    title = {Structure-function analysis of a mixed-linkage β-glucanase/xyloglucanase from the key ruminal bacteroidetes prevotella bryantii {B}14},
    volume = {291},
    issn = {00219258 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84954500354&doi=10.1074%2fjbc.M115.691659&partnerID=40&md5=8931356a5e50e61190a9cded61c97537},
    doi = {10.1074/jbc.M115.691659},
    number = {3},
    journal = {Journal of Biological Chemistry},
    author = {McGregor, N. and Morar, M. and Fenger, T. H. and Stogios, P. and Lenfant, N. and Yin, V. and Xu, X. and Evdokimova, E. and Cui, H. and Henrissat, B. and Savchenko, A. and Brumer, H.},
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    @article{mckechnie_steam-treated_2016,
    title = {Steam-treated wood pellets: {Environmental} and financial implications relative to fossil fuels and conventional pellets for electricity generation},
    volume = {180},
    issn = {03062619 (ISSN)},
    doi = {10.1016/j.apenergy.2016.08.024},
    journal = {Applied Energy},
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    @article{meyer_impact_2016,
    title = {Impact of resin and fatty acids on full-scale anaerobic treatment of pulp and paper mill effluents},
    volume = {33},
    issn = {10928758 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84977137261&doi=10.1089%2fees.2015.0395&partnerID=40&md5=34330a9f19b27be2bfea7e7165b71a5e},
    doi = {10.1089/ees.2015.0395},
    number = {6},
    journal = {Environmental Engineering Science},
    author = {Meyer, T. and Yang, M. I. and Tran, H. N. and Allen, D. G. and Edwards, E. A.},
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    @article{mimura_arabidopsis_2016,
    title = {Arabidopsis {TH}2 encodes the orphan enzyme thiamin monophosphate phosphatase},
    volume = {28},
    issn = {10404651 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84995366756&doi=10.1105%2ftpc.16.00600&partnerID=40&md5=bfdcc100c11480c5a76b501601ccfb17},
    doi = {10.1105/tpc.16.00600},
    number = {10},
    journal = {Plant Cell},
    author = {Mimura, M. and Zallot, R. and Niehaus, T. D. and Hasnain, G. and Gidda, S. K. and Nguyen, T. N. D. and Anderson, E. M. and Mullen, R. T. and Brown, G. and Yakunin, A. F. and de Crécy-Lagard, V. and Gregory, J. F., III and McCarty, D. R. and Hanson, A. D.},
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    @article{molenda_dehalogenimonas_2016,
    title = {Dehalogenimonas sp. {Strain} {WBC}-2 genome and identification of its trans-dichloroethene reductive dehalogenase, {TdrA}},
    volume = {82},
    issn = {00992240 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84953911490&doi=10.1128%2fAEM.02017-15&partnerID=40&md5=2d9103927be6a8b3404689925aa2abb0},
    doi = {10.1128/AEM.02017-15},
    number = {1},
    journal = {Applied and Environmental Microbiology},
    author = {Molenda, O. and Quaile, A. T. and Edwards, E. A.},
    year = {2016},
    pages = {40--50}
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    @article{molenda_complete_2016,
    title = {Complete genome sequence of {Dehalococcoides} mccartyi strain {WBC}-2, capable of anaerobic reductive dechlorination of vinyl chloride},
    volume = {4},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85010792396&doi=10.1128%2fgenomeA.01375-16&partnerID=40&md5=7439d1769c37cb59d6b8ce355a93a98f},
    doi = {10.1128/genomeA.01375-16},
    number = {6},
    journal = {Genome Announcements},
    author = {Molenda, O. and Tang, S. and Edwards, E. A.},
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    @article{mollerup_influence_2016,
    title = {Influence of a family 29 carbohydrate binding module on the recombinant production of galactose oxidase in {Pichia} pastoris},
    volume = {6},
    issn = {23523409 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84961128260&doi=10.1016%2fj.dib.2015.11.032&partnerID=40&md5=b7700c7080a26bf3165f849f8dfd31fe},
    doi = {10.1016/j.dib.2015.11.032},
    journal = {Data in Brief},
    author = {Mollerup, F. and Master, E.},
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    @article{mollerup_influence_2016-1,
    title = {Influence of a family 29 carbohydrate binding module on the activity of galactose oxidase from {Fusarium} graminearum},
    volume = {1860},
    issn = {03044165 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84948469936&doi=10.1016%2fj.bbagen.2015.10.023&partnerID=40&md5=2d48957a3775a856ee5a969fd2c0e885},
    doi = {10.1016/j.bbagen.2015.10.023},
    number = {2},
    journal = {Biochimica et Biophysica Acta - General Subjects},
    author = {Mollerup, F. and Parikka, K. and Vuong, T. V. and Tenkanen, M. and Master, E.},
    year = {2016},
    pages = {354--362}
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    @article{namazi_benefits_2016,
    title = {Benefits of microwave heating method in production of activated carbon},
    volume = {94},
    issn = {00084034 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84974731323&doi=10.1002%2fcjce.22521&partnerID=40&md5=82e0da10861ab542f7bfec7447253f24},
    doi = {10.1002/cjce.22521},
    number = {7},
    journal = {Canadian Journal of Chemical Engineering},
    author = {Namazi, A. B. and Allen, D. G. and Jia, C. Q.},
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    @article{otani_activity_2016,
    title = {The activity of {CouR}, a {MarR} family transcriptional regulator, is modulated through a novel molecular mechanism},
    volume = {44},
    issn = {03051048 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84966356240&doi=10.1093%2fnar%2fgkv955&partnerID=40&md5=618ee99b05e41a31821dd11e7ec1df6d},
    doi = {10.1093/nar/gkv955},
    number = {2},
    journal = {Nucleic Acids Research},
    author = {Otani, H. and Stogios, P. J. and Xu, X. and Nocek, B. and Li, S. N. and Savchenko, A. and Eltis, L. D.},
    year = {2016},
    pages = {595--607}
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    @article{peniuk_identification_2016,
    title = {Identification and quantification of suspended algae and bacteria populations using flow cytometry: applications for algae biofuel and biochemical growth systems},
    volume = {28},
    issn = {09218971 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84957576283&doi=10.1007%2fs10811-015-0569-6&partnerID=40&md5=0936df4f9d47388bc6a6ff4e01483659},
    doi = {10.1007/s10811-015-0569-6},
    number = {1},
    journal = {Journal of Applied Phycology},
    author = {Peniuk, G. T. and Schnurr, P. J. and Allen, D. G.},
    year = {2016},
    pages = {95--104}
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    @article{rodenhizer_development_2016,
    title = {Development of {TRACER}: {Tissue} roll for analysis of cellular environment and response},
    volume = {8},
    issn = {17585082 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85006073846&doi=10.1088%2f1758-5090%2f8%2f4%2f045008&partnerID=40&md5=6856bfe95bfd0996dc8dc38ef5d85459},
    doi = {10.1088/1758-5090/8/4/045008},
    number = {4},
    journal = {Biofabrication},
    author = {Rodenhizer, D. and Cojocari, D. and Wouters, B. G. and McGuigan, A. P.},
    year = {2016}
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    @article{rodenhizer_three-dimensional_2016,
    title = {A three-dimensional engineered tumour for spatial snapshot analysis of cell metabolism and phenotype in hypoxic gradients},
    volume = {15},
    issn = {14761122 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84955478956&doi=10.1038%2fnmat4482&partnerID=40&md5=02a9995d43a7bbec51514b1463c95930},
    doi = {10.1038/nmat4482},
    number = {2},
    journal = {Nature Materials},
    author = {Rodenhizer, D. and Gaude, E. and Cojocari, D. and Mahadevan, R. and Frezza, C. and Wouters, B. G. and McGuigan, A. P.},
    year = {2016},
    pages = {227--234}
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    @article{rolando_legionella_2016,
    title = {Legionella pneumophila {S}1P-lyase targets host sphingolipid metabolism and restrains autophagy},
    volume = {113},
    issn = {00278424 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84959018593&doi=10.1073%2fpnas.1522067113&partnerID=40&md5=82cc4e09f42355d30b2cd3200bb37813},
    doi = {10.1073/pnas.1522067113},
    number = {7},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    author = {Rolando, M. and Escoll, P. and Nora, T. and Botti, J. and Boitez, V. and Bedia, C. and Daniels, C. and Abraham, G. and Stogios, P. J. and Skarina, T. and Christophe, C. and Dervins-Ravault, D. and Cazalet, C. and Hilbi, H. and Rupasinghe, T. W. T. and Tull, D. and McConville, M. J. and Ong, S. Y. and Hartland, E. L. and Codogno, P. and Levade, T. and Naderer, T. and Savchenko, A. and Buchrieser, C.},
    year = {2016},
    pages = {1901--1906}
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  • B. A. Saville, W. M. Griffin, and H. L. MacLean, “Ethanol Production Technologies in the US: Status and Future Developments,” in Global Bioethanol: Evolution, Risks, and Uncertainties, Elsevier Inc., 2016, pp. 163-180.
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    @incollection{saville_ethanol_2016,
    title = {Ethanol {Production} {Technologies} in the {US}: {Status} and {Future} {Developments}},
    isbn = {9780128031568 (ISBN); 9780128031414 (ISBN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84987792441&doi=10.1016%2fB978-0-12-803141-4.00007-1&partnerID=40&md5=b0c473dcd4c011642075159e5551fcf5},
    booktitle = {Global {Bioethanol}: {Evolution}, {Risks}, and {Uncertainties}},
    publisher = {Elsevier Inc.},
    author = {Saville, B. A. and Griffin, W. M. and MacLean, H. L.},
    year = {2016},
    note = {DOI: 10.1016/B978-0-12-803141-4.00007-1},
    pages = {163--180}
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    @article{schnurr_effect_2016,
    title = {The effect of photon flux density on algal biofilm growth and internal fatty acid concentrations},
    volume = {16},
    issn = {22119264 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84962786674&doi=10.1016%2fj.algal.2016.04.001&partnerID=40&md5=21368f4d0bbf41235b1feacae1150314},
    doi = {10.1016/j.algal.2016.04.001},
    journal = {Algal Research},
    author = {Schnurr, P. J. and Espie, G. S. and Allen, G. D.},
    year = {2016},
    pages = {349--356}
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    @article{schnurr_improved_2016,
    title = {Improved biomass productivity in algal biofilms through synergistic interactions between photon flux density and carbon dioxide concentration},
    volume = {219},
    issn = {09608524 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84979702234&doi=10.1016%2fj.biortech.2016.06.129&partnerID=40&md5=bd242af89e41ddfa84b11d1b1b2c36d7},
    doi = {10.1016/j.biortech.2016.06.129},
    journal = {Bioresource Technology},
    author = {Schnurr, P. J. and Molenda, O. and Edwards, E. and Espie, G. S. and Allen, D. G.},
    year = {2016},
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    @article{shen_experience_2016,
    title = {The experience of patients with early-stage testicular cancer during the transition from active treatment to follow-up surveillance},
    volume = {34},
    issn = {10781439 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84961213719&doi=10.1016%2fj.urolonc.2015.09.016&partnerID=40&md5=be3e10b63799780749db754bc9ccb6fe},
    doi = {10.1016/j.urolonc.2015.09.016},
    number = {4},
    journal = {Urologic Oncology: Seminars and Original Investigations},
    author = {Shen, A. H. and Howell, D. and Edwards, E. and Warde, P. and Matthew, A. and Jones, J. M.},
    year = {2016},
    pages = {168.e11--168.e20}
    }
  • [DOI] P. J. Stogios, G. Cox, P. Spanogiannopoulos, M. C. Pillon, N. Waglechner, T. Skarina, K. Koteva, A. Guarné, A. Savchenko, and G. D. Wright, “Rifampin phosphotransferase is an unusual antibiotic resistance kinase,” Nature communications, vol. 7, 2016.
    [Bibtex]
    @article{stogios_rifampin_2016,
    title = {Rifampin phosphotransferase is an unusual antibiotic resistance kinase},
    volume = {7},
    issn = {20411723 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84971669517&doi=10.1038%2fncomms11343&partnerID=40&md5=0bf78eb7b13829da1a27f15b43262ae9},
    doi = {10.1038/ncomms11343},
    journal = {Nature Communications},
    author = {Stogios, P. J. and Cox, G. and Spanogiannopoulos, P. and Pillon, M. C. and Waglechner, N. and Skarina, T. and Koteva, K. and Guarné, A. and Savchenko, A. and Wright, G. D.},
    year = {2016}
    }
  • [DOI] S. Tabtabaei, B. Hijar, B. K. Chen, and L. L. Diosady, “Functional Properties of Protein Isolates Produced by Aqueous Extraction of De-hulled Yellow Mustard,” Jaocs, journal of the american oil chemists’ society, pp. 1-12, 2016.
    [Bibtex]
    @article{tabtabaei_functional_2016,
    title = {Functional {Properties} of {Protein} {Isolates} {Produced} by {Aqueous} {Extraction} of {De}-hulled {Yellow} {Mustard}},
    issn = {0003021X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85000982088&doi=10.1007%2fs11746-016-2922-6&partnerID=40&md5=adfc1997339034e0d1c241dac87c0388},
    doi = {10.1007/s11746-016-2922-6},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    author = {Tabtabaei, S. and Hijar, B. and Chen, B. K. and Diosady, L. L.},
    year = {2016},
    pages = {1--12}
    }
  • [DOI] S. Tang, P. H. Wang, S. A. Higgins, F. E. Löffler, and E. A. Edwards, “Sister Dehalobacter genomes reveal specialization in organohalide respiration and recent strain differentiation likely driven by chlorinated substrates,” Frontiers in microbiology, vol. 7, iss. FEB, 2016.
    [Bibtex]
    @article{tang_sister_2016,
    title = {Sister {Dehalobacter} genomes reveal specialization in organohalide respiration and recent strain differentiation likely driven by chlorinated substrates},
    volume = {7},
    issn = {1664302X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84962145245&doi=10.3389%2ffmicb.2016.00100&partnerID=40&md5=6dc1b162071c91036ee10d63046cdd14},
    doi = {10.3389/fmicb.2016.00100},
    number = {FEB},
    journal = {Frontiers in Microbiology},
    author = {Tang, S. and Wang, P. H. and Higgins, S. A. and Löffler, F. E. and Edwards, E. A.},
    year = {2016}
    }
  • [DOI] M. K. Toroghi, W. R. Cluett, and R. Mahadevan, “A Multi-Scale Model of the Whole Human Body based on Dynamic Parsimonious Flux Balance Analysis,” Ifac-papersonline, vol. 49, iss. 7, pp. 937-942, 2016.
    [Bibtex]
    @article{toroghi_multi-scale_2016,
    title = {A {Multi}-{Scale} {Model} of the {Whole} {Human} {Body} based on {Dynamic} {Parsimonious} {Flux} {Balance} {Analysis}},
    volume = {49},
    issn = {24058963 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84991032295&doi=10.1016%2fj.ifacol.2016.07.319&partnerID=40&md5=c4bd0319e2d5cbb6a048dec95121875f},
    doi = {10.1016/j.ifacol.2016.07.319},
    number = {7},
    journal = {IFAC-PapersOnLine},
    author = {Toroghi, M. K. and Cluett, W. R. and Mahadevan, R.},
    year = {2016},
    pages = {937--942}
    }
  • [DOI] M. L. Urbanus, A. T. Quaile, P. J. Stogios, M. Morar, C. Rao, R. Di Leo, E. Evdokimova, M. Lam, C. Oatway, M. E. Cuff, J. Osipiuk, K. Michalska, B. P. Nocek, M. Taipale, A. Savchenko, and A. W. Ensminger, “Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila,” Molecular systems biology, vol. 12, iss. 12, 2016.
    [Bibtex]
    @article{urbanus_diverse_2016,
    title = {Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, {Legionella} pneumophila},
    volume = {12},
    issn = {17444292 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85007453813&doi=10.15252%2fmsb.20167381&partnerID=40&md5=256149de1b283ef9e99382d44d43d1c2},
    doi = {10.15252/msb.20167381},
    number = {12},
    journal = {Molecular Systems Biology},
    author = {Urbanus, M. L. and Quaile, A. T. and Stogios, P. J. and Morar, M. and Rao, C. and Di Leo, R. and Evdokimova, E. and Lam, M. and Oatway, C. and Cuff, M. E. and Osipiuk, J. and Michalska, K. and Nocek, B. P. and Taipale, M. and Savchenko, A. and Ensminger, A. W.},
    year = {2016}
    }
  • [DOI] T. V. Vuong, M. Foumani, B. MacCormick, R. Kwan, and E. R. Master, “Direct comparison of gluco-oligosaccharide oxidase variants and glucose oxidase: Substrate range and H2o2 stability,” Scientific reports, vol. 6, 2016.
    [Bibtex]
    @article{vuong_direct_2016,
    title = {Direct comparison of gluco-oligosaccharide oxidase variants and glucose oxidase: {Substrate} range and {H}2O2 stability},
    volume = {6},
    issn = {20452322 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84996486454&doi=10.1038%2fsrep37356&partnerID=40&md5=a9763bb162deada8af5cf375412f64bd},
    doi = {10.1038/srep37356},
    journal = {Scientific Reports},
    author = {Vuong, T. V. and Foumani, M. and MacCormick, B. and Kwan, R. and Master, E. R.},
    year = {2016}
    }
  • [DOI] P. H. Wang, S. Tang, K. Nemr, R. Flick, J. Yan, R. Mahadevan, A. F Yakunin, F. E. Löffler, and E. A. Edwards, “Refined experimental annotation reveals conserved corrinoid autotrophy in chloroform-respiring Dehalobacter isolates,” Isme journal, 2016.
    [Bibtex]
    @article{wang_refined_2016,
    title = {Refined experimental annotation reveals conserved corrinoid autotrophy in chloroform-respiring {Dehalobacter} isolates},
    issn = {17517362 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85000542418&doi=10.1038%2fismej.2016.158&partnerID=40&md5=c734f35aee9ec504495cbfc8b7aa7417},
    doi = {10.1038/ismej.2016.158},
    journal = {ISME Journal},
    author = {Wang, P. H. and Tang, S. and Nemr, K. and Flick, R. and Yan, J. and Mahadevan, R. and F Yakunin, A. and Löffler, F. E. and Edwards, E. A.},
    year = {2016}
    }
  • [DOI] W. Wang, R. Yan, B. P. Nocek, T. V. Vuong, R. D. Leo, X. Xu, H. Cui, P. Gatenholm, G. Toriz, M. Tenkanen, A. Savchenko, and E. R. Master, “Biochemical and structural characterization of a five-domain GH115 α-Glucuronidase from the marine bacterium saccharophagus degradans 2-40t,” Journal of biological chemistry, vol. 291, iss. 27, pp. 14120-14133, 2016.
    [Bibtex]
    @article{wang_biochemical_2016,
    title = {Biochemical and structural characterization of a five-domain {GH}115 α-{Glucuronidase} from the marine bacterium saccharophagus degradans 2-40T},
    volume = {291},
    issn = {00219258 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84976872257&doi=10.1074%2fjbc.M115.702944&partnerID=40&md5=68198c38d4525df0b56f4feda325de37},
    doi = {10.1074/jbc.M115.702944},
    number = {27},
    journal = {Journal of Biological Chemistry},
    author = {Wang, W. and Yan, R. and Nocek, B. P. and Vuong, T. V. and Leo, R. D. and Xu, X. and Cui, H. and Gatenholm, P. and Toriz, G. and Tenkanen, M. and Savchenko, A. and Master, E. R.},
    year = {2016},
    pages = {14120--14133}
    }
  • K. Wei, A. Grostern, W. W. M. Chan, R. E. Richardson, and E. A. Edwards, “Electron acceptor interactions between organohalide-respiring bacteria: Cross-feeding, competition, and inhibition,” in Organohalide-Respiring Bacteria, Springer Berlin Heidelberg, 2016, pp. 283-308.
    [Bibtex]
    @incollection{wei_electron_2016,
    title = {Electron acceptor interactions between organohalide-respiring bacteria: {Cross}-feeding, competition, and inhibition},
    isbn = {9783662498750 (ISBN); 9783662498736 (ISBN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85006826674&doi=10.1007%2f978-3-662-49875-0_13&partnerID=40&md5=fdbceeb479714dfe124d75763ce45141},
    booktitle = {Organohalide-{Respiring} {Bacteria}},
    publisher = {Springer Berlin Heidelberg},
    author = {Wei, K. and Grostern, A. and Chan, W. W. M. and Richardson, R. E. and Edwards, E. A.},
    year = {2016},
    note = {DOI: 10.1007/978-3-662-49875-0\_13},
    pages = {283--308}
    }
  • [DOI] M. T. Wong, W. Wang, M. Lacourt, M. Couturier, E. A. Edwards, and E. R. Master, “Substrate-driven convergence of the microbial community in lignocellulose-amended enrichments of gut microflora from the Canadian beaver (Castor canadensis) and North American moose (Alces americanus),” Frontiers in microbiology, vol. 7, iss. JUN, 2016.
    [Bibtex]
    @article{wong_substrate-driven_2016,
    title = {Substrate-driven convergence of the microbial community in lignocellulose-amended enrichments of gut microflora from the {Canadian} beaver ({Castor} canadensis) and {North} {American} moose ({Alces} americanus)},
    volume = {7},
    issn = {1664302X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84979998413&doi=10.3389%2ffmicb.2016.00961&partnerID=40&md5=11da4d2e0d28aa7b9b40d4099b759dc4},
    doi = {10.3389/fmicb.2016.00961},
    number = {JUN},
    journal = {Frontiers in Microbiology},
    author = {Wong, M. T. and Wang, W. and Lacourt, M. and Couturier, M. and Edwards, E. A. and Master, E. R.},
    year = {2016}
    }
  • [DOI] Y. Xiao, L. A. Reis, N. Feric, E. J. Knee, J. Gu, S. Cao, C. Laschinger, C. Londono, J. Antolovich, A. P. McGuigan, and M. Radisic, “Diabetic wound regeneration using peptide-modified hydrogels to target re-epithelialization,” Proceedings of the national academy of sciences of the united states of america, vol. 113, iss. 40, p. E5792–E5801, 2016.
    [Bibtex]
    @article{xiao_diabetic_2016,
    title = {Diabetic wound regeneration using peptide-modified hydrogels to target re-epithelialization},
    volume = {113},
    issn = {00278424 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84989829732&doi=10.1073%2fpnas.1612277113&partnerID=40&md5=29f4b1953416fd1e908f1cd26a4448ad},
    doi = {10.1073/pnas.1612277113},
    number = {40},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    author = {Xiao, Y. and Reis, L. A. and Feric, N. and Knee, E. J. and Gu, J. and Cao, S. and Laschinger, C. and Londono, C. and Antolovich, J. and McGuigan, A. P. and Radisic, M.},
    year = {2016},
    pages = {E5792--E5801}
    }
  • [DOI] B. Xu, D. Rodenhizer, S. Lakhani, X. Zhang, J. P. Soleas, L. Ailles, and A. P. McGuigan, “Patterning cellular compartments within TRACER cultures using sacrificial gelatin printing,” Biofabrication, vol. 8, iss. 3, 2016.
    [Bibtex]
    @article{xu_patterning_2016,
    title = {Patterning cellular compartments within {TRACER} cultures using sacrificial gelatin printing},
    volume = {8},
    issn = {17585082 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84992058697&doi=10.1088%2f1758-5090%2f8%2f3%2f035018&partnerID=40&md5=e24f8e510514b153c7cdde1a1bc71f3e},
    doi = {10.1088/1758-5090/8/3/035018},
    number = {3},
    journal = {Biofabrication},
    author = {Xu, B. and Rodenhizer, D. and Lakhani, S. and Zhang, X. and Soleas, J. P. and Ailles, L. and McGuigan, A. P.},
    year = {2016}
    }

2015

  • [DOI] M. Alcaide, P. J. Stogios, A. Lafraya, A. Tchigvintsev, R. Flick, R. Bargiela, T. N. Chernikova, O. N. Reva, T. Hai, C. C. Leggewie, N. Katzke, V. La Cono, R. Matesanz, M. Jebbar, K. E. Jaeger, M. M. Yakimov, A. F. Yakunin, P. N. Golyshin, O. V. Golyshina, A. Savchenko, and M. Ferrer, “Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats,” Environmental microbiology, vol. 17, iss. 2, pp. 332-345, 2015.
    [Bibtex]
    @article{alcaide_pressure_2015,
    title = {Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats},
    volume = {17},
    issn = {14622912 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84923648530&doi=10.1111%2f1462-2920.12660&partnerID=40&md5=557feff3aba3a4e4ba6f6006db5f02ad},
    doi = {10.1111/1462-2920.12660},
    number = {2},
    journal = {Environmental Microbiology},
    author = {Alcaide, M. and Stogios, P. J. and Lafraya, A. and Tchigvintsev, A. and Flick, R. and Bargiela, R. and Chernikova, T. N. and Reva, O. N. and Hai, T. and Leggewie, C. C. and Katzke, N. and La Cono, V. and Matesanz, R. and Jebbar, M. and Jaeger, K. E. and Yakimov, M. M. and Yakunin, A. F. and Golyshin, P. N. and Golyshina, O. V. and Savchenko, A. and Ferrer, M.},
    year = {2015},
    pages = {332--345}
    }
  • [DOI] M. Alcaide, A. Tchigvintsev, M. Martínez-Martínez, A. Popovic, O. N. Reva, Á. Lafraya, R. Bargiela, T. Y. Nechitaylo, R. Matesanz, M. A. Cambon-Bonavita, M. Jebbar, M. M. Yakimov, A. Savchenko, O. V. Golyshina, A. F. Yakunin, P. N. Golyshin, and M. Ferrer, “Identification and characterization of carboxyl esterases of gill chamber-associated microbiota in the deep-sea shrimp Rimicaris exoculata by using functional metagenomics,” Applied and environmental microbiology, vol. 81, iss. 6, pp. 2125-2136, 2015.
    [Bibtex]
    @article{alcaide_identification_2015,
    title = {Identification and characterization of carboxyl esterases of gill chamber-associated microbiota in the deep-sea shrimp {Rimicaris} exoculata by using functional metagenomics},
    volume = {81},
    issn = {00992240 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84924692190&doi=10.1128%2fAEM.03387-14&partnerID=40&md5=37c5396c9df936684e4ff34e44f8e18a},
    doi = {10.1128/AEM.03387-14},
    number = {6},
    journal = {Applied and Environmental Microbiology},
    author = {Alcaide, M. and Tchigvintsev, A. and Martínez-Martínez, M. and Popovic, A. and Reva, O. N. and Lafraya, Á and Bargiela, R. and Nechitaylo, T. Y. and Matesanz, R. and Cambon-Bonavita, M. A. and Jebbar, M. and Yakimov, M. M. and Savchenko, A. and Golyshina, O. V. and Yakunin, A. F. and Golyshin, P. N. and Ferrer, M.},
    year = {2015},
    pages = {2125--2136}
    }
  • [DOI] N. Beloglazova, K. Kuznedelov, R. Flick, K. A. Datsenko, G. Brown, A. Popovic, S. Lemak, E. Semenova, K. Severinov, and A. F. Yakunin, “CRISPR RNA binding and DNA target recognition by purified Cascade complexes from Escherichia coli,” Nucleic acids research, vol. 43, iss. 1, pp. 530-543, 2015.
    [Bibtex]
    @article{beloglazova_crispr_2015,
    title = {{CRISPR} {RNA} binding and {DNA} target recognition by purified {Cascade} complexes from {Escherichia} coli},
    volume = {43},
    issn = {03051048 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84942079467&doi=10.1093%2fnar%2fgku1285&partnerID=40&md5=b91fe34d8d65e3fab3e14d1adee3ade6},
    doi = {10.1093/nar/gku1285},
    number = {1},
    journal = {Nucleic Acids Research},
    author = {Beloglazova, N. and Kuznedelov, K. and Flick, R. and Datsenko, K. A. and Brown, G. and Popovic, A. and Lemak, S. and Semenova, E. and Severinov, K. and Yakunin, A. F.},
    year = {2015},
    pages = {530--543}
    }
  • [DOI] S. Bonilla, H. Tran, and D. G. Allen, “Enhancing pulp and paper mill biosludge dewaterability using enzymes,” Water research, vol. 68, pp. 692-700, 2015.
    [Bibtex]
    @article{bonilla_enhancing_2015,
    title = {Enhancing pulp and paper mill biosludge dewaterability using enzymes},
    volume = {68},
    issn = {00431354 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84911420343&doi=10.1016%2fj.watres.2014.10.057&partnerID=40&md5=adf749639eb28e8b44d928b6d4862d39},
    doi = {10.1016/j.watres.2014.10.057},
    journal = {Water Research},
    author = {Bonilla, S. and Tran, H. and Allen, D. G.},
    year = {2015},
    pages = {692--700}
    }
  • [DOI] M. Couturier, D. Navarro, D. Chevret, B. Henrissat, F. Piumi, F. J. Ruiz-Dueñas, A. T. Martinez, I. V. Grigoriev, R. Riley, A. Lipzen, J. G. Berrin, E. R. Master, and M. N. Rosso, “Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus,” Biotechnology for biofuels, vol. 8, iss. 1, 2015.
    [Bibtex]
    @article{couturier_enhanced_2015,
    title = {Enhanced degradation of softwood versus hardwood by the white-rot fungus {Pycnoporus} coccineus},
    volume = {8},
    issn = {17546834 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84950310403&doi=10.1186%2fs13068-015-0407-8&partnerID=40&md5=18bce8045e5c75471cb6dd4456b82148},
    doi = {10.1186/s13068-015-0407-8},
    number = {1},
    journal = {Biotechnology for Biofuels},
    author = {Couturier, M. and Navarro, D. and Chevret, D. and Henrissat, B. and Piumi, F. and Ruiz-Dueñas, F. J. and Martinez, A. T. and Grigoriev, I. V. and Riley, R. and Lipzen, A. and Berrin, J. G. and Master, E. R. and Rosso, M. N.},
    year = {2015}
    }
  • [DOI] G. Cox, P. J. Stogios, A. Savchenko, and G. D. Wright, “Structural and molecular basis for resistance to aminoglycoside antibiotics by the adenylyltransferase ANT(2″)-Ia,” Mbio, vol. 6, iss. 1, 2015.
    [Bibtex]
    @article{cox_structural_2015,
    title = {Structural and molecular basis for resistance to aminoglycoside antibiotics by the adenylyltransferase {ANT}(2″)-{Ia}},
    volume = {6},
    issn = {21612129 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84924108668&doi=10.1128%2fmBio.02180-14&partnerID=40&md5=9c815c2e75fa1914888963eb01ec8723},
    doi = {10.1128/mBio.02180-14},
    number = {1},
    journal = {mBio},
    author = {Cox, G. and Stogios, P. J. and Savchenko, A. and Wright, G. D.},
    year = {2015}
    }
  • [DOI] A. M. Crowe, P. J. Stogios, I. Casabon, E. Evdokimova, A. Savchenko, and L. D. Eltis, “Structural and functional characterization of a ketosteroid transcriptional regulator of Mycobacterium tuberculosis,” Journal of biological chemistry, vol. 290, iss. 2, pp. 872-882, 2015.
    [Bibtex]
    @article{crowe_structural_2015,
    title = {Structural and functional characterization of a ketosteroid transcriptional regulator of {Mycobacterium} tuberculosis},
    volume = {290},
    issn = {00219258 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84920887665&doi=10.1074%2fjbc.M114.607481&partnerID=40&md5=28eae36ff2f7d0334454f8b025acdf82},
    doi = {10.1074/jbc.M114.607481},
    number = {2},
    journal = {Journal of Biological Chemistry},
    author = {Crowe, A. M. and Stogios, P. J. and Casabon, I. and Evdokimova, E. and Savchenko, A. and Eltis, L. D.},
    year = {2015},
    pages = {872--882}
    }
  • [DOI] E. D’Arcangelo and A. P. McGuigan, “Micropatterning strategies to engineer controlled cell and tissue architecture in vitro,” Biotechniques, vol. 58, iss. 1, pp. 13-23, 2015.
    [Bibtex]
    @article{darcangelo_micropatterning_2015,
    title = {Micropatterning strategies to engineer controlled cell and tissue architecture in vitro},
    volume = {58},
    issn = {07366205 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84921780965&doi=10.2144%2f000114245&partnerID=40&md5=17edacccd1c6d2d24a48bb92b94cf386},
    doi = {10.2144/000114245},
    number = {1},
    journal = {BioTechniques},
    author = {D'Arcangelo, E. and McGuigan, A. P.},
    year = {2015},
    pages = {13--23}
    }
  • [DOI] A. Dumitrache, H. J. Eberl, D. G. Allen, and G. M. Wolfaardt, “Mathematical modeling to validate on-line CO\textlessinf\textgreater2\textless/inf\textgreater measurements as a metric for cellulolytic biofilm activity in continuous-flow bioreactors,” Biochemical engineering journal, vol. 101, pp. 55-67, 2015.
    [Bibtex]
    @article{dumitrache_mathematical_2015,
    title = {Mathematical modeling to validate on-line {CO}{\textless}inf{\textgreater}2{\textless}/inf{\textgreater} measurements as a metric for cellulolytic biofilm activity in continuous-flow bioreactors},
    volume = {101},
    issn = {1369703X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84929148938&doi=10.1016%2fj.bej.2015.04.022&partnerID=40&md5=16a89ce6d5feaf364530944283c95834},
    doi = {10.1016/j.bej.2015.04.022},
    journal = {Biochemical Engineering Journal},
    author = {Dumitrache, A. and Eberl, H. J. and Allen, D. G. and Wolfaardt, G. M.},
    year = {2015},
    pages = {55--67}
    }
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    [Bibtex]
    @article{ebrahim_genome-scale_2015,
    title = {Do genome-scale models need exact solvers or clearer standards?},
    volume = {11},
    issn = {17444292 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84945933008&doi=10.15252%2fmsb.20156157&partnerID=40&md5=23e7773bebee383ff0f7f562b31394a8},
    doi = {10.15252/msb.20156157},
    number = {10},
    journal = {Molecular Systems Biology},
    author = {Ebrahim, A. and Almaas, E. and Bauer, E. and Bordbar, A. and Burgard, A. P. and Chang, R. L. and Dräger, A. and Famili, I. and Feist, A. M. and Fleming, R. M. T. and Fong, S. S. and Hatzimanikatis, V. and Holder, A. and Hucka, M. and Hyduke, D. and Jamshidi, N. and Lee, S. Y. and Le Novère, N. and Lerman, J. A. and Lewis, N. E. and Ma, D. and Mahadevan, R. and Maranas, C. and Nagarajan, H. and Navid, A. and Nielsen, J. and Nielsen, L. K. and Nogales, J. and Noronha, A. and Pal, C. and Palsson, B. O. and Papin, J. A. and Patil, K. R. and Price, N. D. and Reed, J. L. and Saunders, M. and Senger, R. S. and Sonnenschein, N. and Sun, Y. and Thiele, I.},
    year = {2015}
    }
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    [Bibtex]
    @article{foumani_enhanced_2015,
    title = {Enhanced {Polysaccharide} {Binding} and {Activity} on {Linear} β-{Glucans} through {Addition} of {Carbohydrate}-{Binding} {Modules} to {Either} {Terminus} of a {Glucooligosaccharide} {Oxidase}},
    volume = {10},
    issn = {19326203 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84928799208&doi=10.1371%2fjournal.pone.0125398&partnerID=40&md5=bd4836b8ba0e308d032991973d0c49d8},
    doi = {10.1371/journal.pone.0125398},
    number = {5},
    journal = {PLoS ONE},
    author = {Foumani, M. and Vuong, T. V. and MacCormick, B. and Master, E. R.},
    year = {2015}
    }
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    [Bibtex]
    @article{gandla_expression_2015,
    title = {Expression of a fungal glucuronoyl esterase in populus: {Effects} on wood properties and saccharification efficiency},
    volume = {112},
    issn = {00319422 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84935897099&doi=10.1016%2fj.phytochem.2014.06.002&partnerID=40&md5=d8a9e2dd94957d0881547d1ab1611ebb},
    doi = {10.1016/j.phytochem.2014.06.002},
    number = {1},
    journal = {Phytochemistry},
    author = {Gandla, M. L. and Derba-Maceluch, M. and Liu, X. and Gerber, L. and Master, E. R. and Mellerowicz, E. J. and Jönsson, L. J.},
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    pages = {210--220}
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    @article{gaona_effect_2015,
    title = {The {Effect} of {Fed}-{Batch} {Operation} and {Rotational} {Speed} on {High}-{Solids} {Enzymatic} {Hydrolysis} of {Hardwood} {Substrates}},
    volume = {11},
    issn = {15509087 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84945394171&doi=10.1089%2find.2014.0031&partnerID=40&md5=70c17278a6eaf1564c8ad53d0d10d9b8},
    doi = {10.1089/ind.2014.0031},
    number = {5},
    journal = {Industrial Biotechnology},
    author = {Gaona, A. and Lawryshyn, Y. and Saville, B.},
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    pages = {277--283}
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    [Bibtex]
    @article{gawand_sub-optimal_2015,
    title = {Sub-optimal phenotypes of double-knockout mutants of {Escherichia} coli depend on the order of gene deletions},
    volume = {7},
    issn = {17579694 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84938679149&doi=10.1039%2fc5ib00096c&partnerID=40&md5=0d13297e805ab304c652952bf1e9206b},
    doi = {10.1039/c5ib00096c},
    number = {8},
    journal = {Integrative Biology (United Kingdom)},
    author = {Gawand, P. and Said Abukar, F. and Venayak, N. and Partow, S. and Motter, A. E. and Mahadevan, R.},
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    @article{genin_novel_2015,
    title = {Novel waveguide reactor design for enhancing algal biofilm growth},
    volume = {12},
    issn = {22119264 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84947921761&doi=10.1016%2fj.algal.2015.10.013&partnerID=40&md5=6f595f9a7098d3cbb24f9acc055aff6e},
    doi = {10.1016/j.algal.2015.10.013},
    journal = {Algal Research},
    author = {Genin, S. N. and Aitchison, J. S. and Allen, D. G.},
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    pages = {529--538}
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    @article{gold_metabolic_2015,
    title = {Metabolic engineering of a tyrosine-overproducing yeast platform using targeted metabolomics},
    volume = {14},
    issn = {14752859 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84931041879&doi=10.1186%2fs12934-015-0252-2&partnerID=40&md5=f250e9994abb1c36e5320c499fde1b9f},
    doi = {10.1186/s12934-015-0252-2},
    number = {1},
    journal = {Microbial Cell Factories},
    author = {Gold, N. D. and Gowen, C. M. and Lussier, F. X. and Cautha, S. C. and Mahadevan, R. and Martin, V. J. J.},
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    [Bibtex]
    @article{halavaty_structural_2015,
    title = {Structural and functional analysis of betaine aldehyde dehydrogenase from {Staphylococcus} aureus},
    volume = {71},
    issn = {09074449 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84929233023&doi=10.1107%2fS1399004715004228&partnerID=40&md5=8b2a568d26fa65e5794e19f9ca797ab1},
    doi = {10.1107/S1399004715004228},
    journal = {Acta Crystallographica Section D: Biological Crystallography},
    author = {Halavaty, A. S. and Rich, R. L. and Chen, C. and Joo, J. C. and Minasov, G. and Dubrovska, I. and Winsor, J. R. and Myszka, D. G. and Duban, M. and Shuvalova, L. and Yakunin, A. F. and Anderson, W. F.},
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    [Bibtex]
    @article{hug_corrigendum_2015,
    title = {Corrigendum to {Diversity} of reductive dehalogenase genes from environmental samples and enrichment cultures identified with degenerate primer {PCR} screens [{Front}. {Microbiol}., 4 (2013) 341] {DOI}: 10.3389/fmicb.2013.00341]},
    volume = {6},
    issn = {1664302X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84927512244&doi=10.3389%2ffmicb.2015.00030&partnerID=40&md5=400aad7c88179281ed58a538a5608501},
    doi = {10.3389/fmicb.2015.00030},
    number = {FEB},
    journal = {Frontiers in Microbiology},
    author = {Hug, L. A. and Edwards, E. A.},
    year = {2015}
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    @article{huynh_situ_2015,
    title = {In situ conversion of porphyrin microbubbles to nanoparticles for multimodality imaging},
    volume = {10},
    issn = {17483387 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84927176348&doi=10.1038%2fnnano.2015.25&partnerID=40&md5=ed30d58154b4f2a2081e2e4359157f06},
    doi = {10.1038/nnano.2015.25},
    number = {4},
    journal = {Nature Nanotechnology},
    author = {Huynh, E. and Leung, B. Y. C. and Helfield, B. L. and Shakiba, M. and Gandier, J. A. and Jin, C. S. and Master, E. R. and Wilson, B. C. and Goertz, D. E. and Zheng, G.},
    year = {2015},
    pages = {325--332}
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    @article{islam_investigating_2015,
    title = {Investigating {Moorella} thermoacetica metabolism with a genome-scale constraint-based metabolic model},
    volume = {7},
    issn = {17579708 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84979823459&doi=10.1039%2fc5ib00095e&partnerID=40&md5=54574cbb1d82236c8c5245465ef13a29},
    doi = {10.1039/c5ib00095e},
    number = {8},
    journal = {Integrative biology : quantitative biosciences from nano to macro},
    author = {Islam, M. A. and Zengler, K. and Edwards, E. A. and Mahadevan, R. and Stephanopoulos, G.},
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    pages = {869--882}
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    @article{javaherian_vitro_2015,
    title = {An in vitro model of tissue boundary formation for dissecting the contribution of different boundary forming mechanisms},
    volume = {7},
    issn = {17579708 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84952716174&doi=10.1039%2fc4ib00272e&partnerID=40&md5=cb9b7b168f96ae57fa8a25fe3dfc156d},
    doi = {10.1039/c4ib00272e},
    number = {3},
    journal = {Integrative biology : quantitative biosciences from nano to macro},
    author = {Javaherian, S. and D'Arcangelo, E. and Slater, B. and Zulueta-Coarasa, T. and Fernandez-Gonzalez, R. and McGuigan, A. P.},
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    @article{kaur_functional_2015,
    title = {Functional and structural diversity in {GH}62 α-{L}-arabinofuranosidases from the thermophilic fungus {Scytalidium} thermophilum},
    volume = {8},
    issn = {17517907 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84928052016&doi=10.1111%2f1751-7915.12168&partnerID=40&md5=2836d610f1ea67862cd119297782dbaa},
    doi = {10.1111/1751-7915.12168},
    number = {3},
    journal = {Microbial Biotechnology},
    author = {Kaur, A. P. and Nocek, B. P. and Xu, X. and Lowden, M. J. and Leyva, J. F. and Stogios, P. J. and Cui, H. and Di Leo, R. and Powlowski, J. and Tsang, A. and Savchenko, A.},
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    @article{klamt_feasibility_2015,
    title = {On the feasibility of growth-coupled product synthesis in microbial strains},
    volume = {30},
    issn = {10967176 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84935478514&doi=10.1016%2fj.ymben.2015.05.006&partnerID=40&md5=7f7f47842fa6c78b28a5e9db27f06e81},
    doi = {10.1016/j.ymben.2015.05.006},
    journal = {Metabolic Engineering},
    author = {Klamt, S. and Mahadevan, R.},
    year = {2015},
    pages = {166--178}
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    [Bibtex]
    @article{kocur_contributions_2015,
    title = {Contributions of {Abiotic} and {Biotic} {Dechlorination} {Following} {Carboxymethyl} {Cellulose} {Stabilized} {Nanoscale} {Zero} {Valent} {Iron} {Injection}},
    volume = {49},
    issn = {0013936X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84937459540&doi=10.1021%2facs.est.5b00719&partnerID=40&md5=3265a180f15acc2af7d2e8eb08f65be9},
    doi = {10.1021/acs.est.5b00719},
    number = {14},
    journal = {Environmental Science and Technology},
    author = {Kocur, C. M. D. and Lomheim, L. and Boparai, H. K. and Chowdhury, A. I. A. and Weber, K. P. and Austrins, L. M. and Edwards, E. A. and Sleep, B. E. and O'Carroll, D. M.},
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    @article{kuznetsova_functional_2015,
    title = {Functional diversity of haloacid dehalogenase superfamily phosphatases from {Saccharomyces} cerevisiae: {Biochemical}, structural, and evolutionary insights},
    volume = {290},
    issn = {00219258 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84937939003&doi=10.1074%2fjbc.M115.657916&partnerID=40&md5=d040fccecb27c5b753406c9fd37b61a0},
    doi = {10.1074/jbc.M115.657916},
    number = {30},
    journal = {Journal of Biological Chemistry},
    author = {Kuznetsova, E. and Nocek, B. and Brown, G. and Makarova, K. S. and Flick, R. and Wolf, Y. I. and Khusnutdinova, A. and Evdokimova, E. and Jin, K. and Tan, K. and Hanson, A. D. and Hasnain, G. and Zallot, R. and De Crécy-Lagard, V. and Babu, M. and Savchenko, A. and Joachimiak, A. and Edwards, A. M. and Koonin, E. V. and Yakunin, A. F.},
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    @article{liang_identity_2015,
    title = {Identity and substrate specificity of reductive dehalogenases expressed in {Dehalococcoides}-containing enrichment cultures maintained on different chlorinated ethenes},
    volume = {81},
    issn = {00992240 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84931436320&doi=10.1128%2fAEM.00536-15&partnerID=40&md5=d9f7711c226728333a71ae060f61a950},
    doi = {10.1128/AEM.00536-15},
    number = {14},
    journal = {Applied and Environmental Microbiology},
    author = {Liang, X. and Molenda, O. and Tang, S. and Edwards, E. A.},
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    @article{littunen_effect_2015,
    title = {Effect of {Xylan} {Structure} on {Reactivity} in {Graft} {Copolymerization} and {Subsequent} {Binding} to {Cellulose}},
    volume = {16},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84927914358&doi=10.1021%2fbm501732b&partnerID=40&md5=0223faff9d92fe233fadfcf526e9f59f},
    doi = {10.1021/bm501732b},
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    journal = {Biomacromolecules},
    author = {Littunen, K. and Kilpeläinen, P. and Junka, K. and Sipponen, M. and Master, E. R. and Seppälä, J.},
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    @article{luk_life_2015,
    title = {Life cycle air emissions impacts and ownership costs of light-duty vehicles using natural gas as a primary energy source},
    volume = {49},
    issn = {0013936X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84928380963&doi=10.1021%2fes5045387&partnerID=40&md5=0bc80da67208681794203cf7660b4c90},
    doi = {10.1021/es5045387},
    number = {8},
    journal = {Environmental Science and Technology},
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    @article{mahadevan_genome-scale_2015,
    title = {Genome-scale strain designs based on regulatory minimal cut sets},
    volume = {31},
    issn = {13674803 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84940738929&doi=10.1093%2fbioinformatics%2fbtv217&partnerID=40&md5=14ec122c3aee5f9127fe5dc76942a058},
    doi = {10.1093/bioinformatics/btv217},
    number = {17},
    journal = {Bioinformatics},
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    year = {2015},
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    [Bibtex]
    @article{mai-gisondi_enhancement_2015,
    title = {Enhancement of acetyl xylan esterase activity on cellulose acetate through fusion to a family 3 cellulose binding module},
    volume = {79-80},
    issn = {01410229 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84937433255&doi=10.1016%2fj.enzmictec.2015.07.001&partnerID=40&md5=83118120d5b77c6402e85907021663bd},
    doi = {10.1016/j.enzmictec.2015.07.001},
    journal = {Enzyme and Microbial Technology},
    author = {Mai-Gisondi, G. and Turunen, O. and Pastinen, O. and Pahimanolis, N. and Master, E. R.},
    year = {2015},
    pages = {27--33}
    }
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    [Bibtex]
    @article{makarova_updated_2015,
    title = {An updated evolutionary classification of {CRISPR}-{Cas} systems},
    volume = {13},
    issn = {17401526 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84944449180&doi=10.1038%2fnrmicro3569&partnerID=40&md5=08412e544c4af33665caef4214a21622},
    doi = {10.1038/nrmicro3569},
    number = {11},
    journal = {Nature Reviews Microbiology},
    author = {Makarova, K. S. and Wolf, Y. I. and Alkhnbashi, O. S. and Costa, F. and Shah, S. A. and Saunders, S. J. and Barrangou, R. and Brouns, S. J. J. and Charpentier, E. and Haft, D. H. and Horvath, P. and Moineau, S. and Mojica, F. J. M. and Terns, R. M. and Terns, M. P. and White, M. F. and Yakunin, A. F. and Garrett, R. A. and Van Der Oost, J. and Backofen, R. and Koonin, E. V.},
    year = {2015},
    pages = {722--736}
    }
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    [Bibtex]
    @article{mckechnie_environmental_2015,
    title = {Environmental and financial implications of ethanol as a bioethylene feedstock versus as a transportation fuel},
    volume = {10},
    issn = {17489318 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84952894873&doi=10.1088%2f1748-9326%2f10%2f12%2f124018&partnerID=40&md5=f77e43ebf00d5863476f02fbddaf4ac3},
    doi = {10.1088/1748-9326/10/12/124018},
    number = {12},
    journal = {Environmental Research Letters},
    author = {McKechnie, J. and Pourbafrani, M. and Saville, B. A. and MacLean, H. L.},
    year = {2015}
    }
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    [Bibtex]
    @article{mckechnie_exploring_2015,
    title = {Exploring impacts of process technology development and regional factors on life cycle greenhouse gas emissions of corn stover ethanol},
    volume = {76},
    issn = {09601481 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84919663630&doi=10.1016%2fj.renene.2014.11.088&partnerID=40&md5=959b08108a36c5f19a530e873d61c2d9},
    doi = {10.1016/j.renene.2014.11.088},
    journal = {Renewable Energy},
    author = {McKechnie, J. and Pourbafrani, M. and Saville, B. A. and MacLean, H. L.},
    year = {2015},
    pages = {726--734}
    }
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    [Bibtex]
    @article{meyer_corrigendum_2015,
    title = {Corrigendum to "{Anaerobic} digestion of pulp and paper mill wastewater and sludge" [{Water} {Res}., 65, (2014), 321-349], doi:10.1016/j.watres.2014.07.022},
    volume = {68},
    issn = {00431354 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84922318993&doi=10.1016%2fj.watres.2014.10.059&partnerID=40&md5=55246133dc7995cb175c38c4c5fac499},
    doi = {10.1016/j.watres.2014.10.059},
    journal = {Water Research},
    author = {Meyer, T. and Edwards, E. A.},
    year = {2015},
    pages = {849}
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    [Bibtex]
    @article{meziane-cherif_structural_2015,
    title = {Structural and functional adaptation of vancomycin resistance vant serine racemases},
    volume = {6},
    issn = {21612129 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84940839113&doi=10.1128%2fmBio.00806-15&partnerID=40&md5=8c4b76a8d3b826a1816e0571b002a59b},
    doi = {10.1128/mBio.00806-15},
    number = {4},
    journal = {mBio},
    author = {Meziane-Cherif, D. and Stogios, P. J. and Evdokimova, E. and Egorova, O. and Savchenko, A. and Courvalin, P.},
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    [Bibtex]
    @article{morar_crystal_2015,
    title = {Crystal structure of the {Legionella} pneumophila lem 10 effector reveals a new member of the {HD} protein superfamily},
    volume = {83},
    issn = {08873585 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84954387672&doi=10.1002%2fprot.24933&partnerID=40&md5=2a0ae44dbfcd466091aba9c4df5f3250},
    doi = {10.1002/prot.24933},
    number = {12},
    journal = {Proteins: Structure, Function and Bioinformatics},
    author = {Morar, M. and Evdokimova, E. and Chang, C. and Ensminger, A. W. and Savchenko, A.},
    year = {2015},
    pages = {2319--2325}
    }
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    [Bibtex]
    @article{mulder_multiple_2015,
    title = {Multiple histidines in the periplasmic domain of the {Salmonella} enterica sensor kinase {SsrA} enhance signaling in response to extracellular acidification},
    volume = {95},
    issn = {0950382X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84922511774&doi=10.1111%2fmmi.12895&partnerID=40&md5=6549ecfe0e526830154048ba4d77062a},
    doi = {10.1111/mmi.12895},
    number = {4},
    journal = {Molecular Microbiology},
    author = {Mulder, D. T. and McPhee, J. B. and Reid-Yu, S. A. and Stogios, P. J. and Savchenko, A. and Coombes, B. K.},
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    pages = {678--691}
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    [Bibtex]
    @article{nakayasu_identification_2015,
    title = {Identification of salmonella typhimurium deubiquitinase ssel substrates by immunoaffinity enrichment and quantitative proteomic analysis},
    volume = {14},
    issn = {15353893 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84941122119&doi=10.1021%2facs.jproteome.5b00574&partnerID=40&md5=1ec3fccebdf84ce9243609d199833f8e},
    doi = {10.1021/acs.jproteome.5b00574},
    number = {9},
    journal = {Journal of Proteome Research},
    author = {Nakayasu, E. S. and Sydor, M. A. and Brown, R. N. and Sontag, R. L. and Sobreira, T. J. P. and Slysz, G. W. and Humphrys, D. R. and Skarina, T. and Onoprienko, O. and Di Leo, R. and Deatherage Kaiser, B. L. and Li, J. and Ansong, C. and Cambronne, E. D. and Smith, R. D. and Savchenko, A. and Adkins, J. N.},
    year = {2015},
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    [Bibtex]
    @article{namazi_effect_2015,
    title = {Effect of chemical components in white liquor on carbon activation},
    volume = {93},
    issn = {00084034 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84942366267&doi=10.1002%2fcjce.22281&partnerID=40&md5=7b2d40e06754621fa0034349402ae403},
    doi = {10.1002/cjce.22281},
    number = {10},
    journal = {Canadian Journal of Chemical Engineering},
    author = {Namazi, A. B. and Allen, D. G. and Jia, C. Q.},
    year = {2015},
    pages = {1705--1712}
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    [Bibtex]
    @article{namazi_microwave-assisted_2015,
    title = {Microwave-assisted pyrolysis and activation ofpulp mill sludge},
    volume = {73},
    issn = {09619534 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84920997233&doi=10.1016%2fj.biombioe.2014.12.023&partnerID=40&md5=6e020f0cc4c35e97eba093d8c15b8fec},
    doi = {10.1016/j.biombioe.2014.12.023},
    journal = {Biomass and Bioenergy},
    author = {Namazi, A. B. and Allen, D. G. and Jia, C. Q.},
    year = {2015},
    pages = {217--224}
    }
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    [Bibtex]
    @article{namazi_probing_2015,
    title = {Probing microwave heating of lignocellulosic biomasses},
    volume = {112},
    issn = {01652370 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84925357177&doi=10.1016%2fj.jaap.2015.02.009&partnerID=40&md5=37e42cbfb611682785bcc911eca5d57c},
    doi = {10.1016/j.jaap.2015.02.009},
    journal = {Journal of Analytical and Applied Pyrolysis},
    author = {Namazi, A. B. and Allen, D. G. and Jia, C. Q.},
    year = {2015},
    pages = {121--128}
    }
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    [Bibtex]
    @article{pahimanolis_novel_2015,
    title = {Novel thiol- amine- and amino acid functional xylan derivatives synthesized by thiol-ene reaction},
    volume = {131},
    issn = {01448617 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84933040299&doi=10.1016%2fj.carbpol.2015.06.007&partnerID=40&md5=4161f206da382fdbc93d035a089e2de2},
    doi = {10.1016/j.carbpol.2015.06.007},
    journal = {Carbohydrate Polymers},
    author = {Pahimanolis, N. and Kilpeläinen, P. and Master, E. and Ilvesniemi, H. and Seppälä, J.},
    year = {2015},
    pages = {392--398}
    }
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    [Bibtex]
    @article{parikka_oxidation_2015,
    title = {Oxidation with galactose oxidase: {Multifunctional} enzymatic catalysis},
    volume = {120},
    issn = {13811177 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84937214091&doi=10.1016%2fj.molcatb.2015.06.006&partnerID=40&md5=0884d3baa8c50eb5c7185f66763ac140},
    doi = {10.1016/j.molcatb.2015.06.006},
    journal = {Journal of Molecular Catalysis B: Enzymatic},
    author = {Parikka, K. and Master, E. and Tenkanen, M.},
    year = {2015},
    pages = {47--59}
    }
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    [Bibtex]
    @article{placido_diversity_2015,
    title = {Diversity of hydrolases from hydrothermal vent sediments of the {Levante} {Bay}, {Vulcano} {Island} ({Aeolian} archipelago) identified by activity-based metagenomics and biochemical characterization of new esterases and an arabinopyranosidase},
    volume = {99},
    issn = {01757598 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84947029800&doi=10.1007%2fs00253-015-6873-x&partnerID=40&md5=e89cc6b808978374501e6356712bfdc6},
    doi = {10.1007/s00253-015-6873-x},
    number = {23},
    journal = {Applied Microbiology and Biotechnology},
    author = {Placido, A. and Hai, T. and Ferrer, M. and Chernikova, T. N. and Distaso, M. and Armstrong, D. and Yakunin, A. F. and Toshchakov, S. V. and Yakimov, M. M. and Kublanov, I. V. and Golyshina, O. V. and Pesole, G. and Ceci, L. R. and Golyshin, P. N.},
    year = {2015},
    pages = {10031--10046}
    }
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    [Bibtex]
    @article{quaile_molecular_2015,
    title = {Molecular {Characterization} of {LubX}: {Functional} {Divergence} of the {U}-{Box} {Fold} by {Legionella} pneumophila},
    volume = {23},
    issn = {09692126 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84938750845&doi=10.1016%2fj.str.2015.05.020&partnerID=40&md5=ba093c70a8a8695c2c46446f6af039c5},
    doi = {10.1016/j.str.2015.05.020},
    number = {8},
    journal = {Structure},
    author = {Quaile, A. T. and Urbanus, M. L. and Stogios, P. J. and Nocek, B. and Skarina, T. and Ensminger, A. W. and Savchenko, A.},
    year = {2015},
    pages = {1459--1469}
    }
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    [Bibtex]
    @article{rodenhizer_erratum:_2015,
    title = {Erratum: {A} three-dimensional engineered tumour for spatial snapshot analysis of cell metabolism and phenotype in hypoxic gradients ({Nature} {Materials} (2015) 10.1038/nmat4482)},
    volume = {15},
    issn = {14761122 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84955459965&doi=10.1038%2fnmat4515&partnerID=40&md5=21dbce64d4816a4689cafcb56111e10e},
    doi = {10.1038/nmat4515},
    number = {2},
    journal = {Nature Materials},
    author = {Rodenhizer, D. and Gaude, E. and Cojocari, D. and Mahadevan, R. and Frezza, C. and Wouters, B. G. and McGuigan, A. P.},
    year = {2015}
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    [Bibtex]
    @article{samadifard_ferric_2015,
    title = {Ferric sulfate leaching of pyrrhotite tailings between 30 to 55 °{C}},
    volume = {5},
    issn = {2075163X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84948970345&doi=10.3390%2fmin5040526&partnerID=40&md5=614feb38753da65d39e607adf02e31cd},
    doi = {10.3390/min5040526},
    number = {4},
    journal = {Minerals},
    author = {Samadifard, N. and Devine, C. E. and Edwards, E. and Mahadevan, K. and Papangelakis, V. G.},
    year = {2015},
    pages = {801--814}
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    [Bibtex]
    @article{schnurr_factors_2015,
    title = {Factors affecting algae biofilm growth and lipid production: {A} review},
    volume = {52},
    issn = {13640321 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84939154070&doi=10.1016%2fj.rser.2015.07.090&partnerID=40&md5=d34e01284a9d151a64a02fa22add4b52},
    doi = {10.1016/j.rser.2015.07.090},
    journal = {Renewable and Sustainable Energy Reviews},
    author = {Schnurr, P. J. and Allen, D. G.},
    year = {2015},
    pages = {418--429}
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    [Bibtex]
    @article{selig_debranching_2015,
    title = {Debranching of soluble wheat arabinoxylan dramatically enhances recalcitrant binding to cellulose},
    volume = {37},
    issn = {01415492 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84925543688&doi=10.1007%2fs10529-014-1705-0&partnerID=40&md5=205e2a3e6a21bdec5723b1ff91ccbec7},
    doi = {10.1007/s10529-014-1705-0},
    number = {3},
    journal = {Biotechnology Letters},
    author = {Selig, M. J. and Thygesen, L. G. and Felby, C. and Master, E. R.},
    year = {2015},
    pages = {633--641}
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    [Bibtex]
    @article{selig_modified_2015,
    title = {Modified cellobiohydrolase–cellulose interactions following treatment with lytic polysaccharide monooxygenase {CelS}2 ({ScLPMO}10C) observed by {QCM}-{D}},
    volume = {22},
    issn = {09690239 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84937970292&doi=10.1007%2fs10570-015-0635-x&partnerID=40&md5=b23d416d01c7cc5832f385003a9bbfd9},
    doi = {10.1007/s10570-015-0635-x},
    number = {4},
    journal = {Cellulose},
    author = {Selig, M. J. and Vuong, T. V. and Gudmundsson, M. and Forsberg, Z. and Westereng, B. and Felby, C. and Master, E. R.},
    year = {2015},
    pages = {2263--2270}
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    [Bibtex]
    @article{semenova_cas6e_2015,
    title = {The {Cas}6e ribonuclease is not required for interference and adaptation by the {E}. {Colitype} {I}-{E} {CRISPR}-{Cas} system},
    volume = {43},
    issn = {03051048 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84942156327&doi=10.1093%2fnar%2fgkv546&partnerID=40&md5=9911622085ba4449b36369ef975008ba},
    doi = {10.1093/nar/gkv546},
    number = {12},
    journal = {Nucleic Acids Research},
    author = {Semenova, E. and Kuznedelov, K. and Datsenko, K. A. and Boudry, P. M. and Savitskaya, E. E. and Medvedeva, S. and Beloglazova, N. and Logacheva, M. and Yakunin, A. F. and Severinov, K.},
    year = {2015},
    pages = {6049--6061}
    }
  • [DOI] M. A. Serbanescu, M. Cordova, K. Krastel, R. Flick, N. Beloglazova, A. Latos, A. F. Yakunin, D. B. Senadheera, and D. G. Cvitkovitch, “Role of the Streptococcus mutans CRISPR-Cas systems in immunity and cell physiology,” Journal of bacteriology, vol. 197, iss. 4, pp. 749-761, 2015.
    [Bibtex]
    @article{serbanescu_role_2015,
    title = {Role of the {Streptococcus} mutans {CRISPR}-{Cas} systems in immunity and cell physiology},
    volume = {197},
    issn = {00219193 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84921739341&doi=10.1128%2fJB.02333-14&partnerID=40&md5=14351483d89fa7bc4b5fc0c5e6f1de2d},
    doi = {10.1128/JB.02333-14},
    number = {4},
    journal = {Journal of Bacteriology},
    author = {Serbanescu, M. A. and Cordova, M. and Krastel, K. and Flick, R. and Beloglazova, N. and Latos, A. and Yakunin, A. F. and Senadheera, D. B. and Cvitkovitch, D. G.},
    year = {2015},
    pages = {749--761}
    }
  • S. Sinichi and L. L. Diosady, “Isopropyl alcohol extraction of mustard oil,” International news on fats, oils and related materials, vol. 26, iss. 3, pp. 179-182, 2015.
    [Bibtex]
    @article{sinichi_isopropyl_2015,
    title = {Isopropyl alcohol extraction of mustard oil},
    volume = {26},
    issn = {08978026 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84928474573&partnerID=40&md5=3f3ed976b5b05b71e3581799b2af9dbb},
    number = {3},
    journal = {International News on Fats, Oils and Related Materials},
    author = {Sinichi, S. and Diosady, L. L.},
    year = {2015},
    pages = {179--182}
    }
  • [DOI] J. P. Soleas, T. K. Waddell, and A. P. McGuigan, “Topographically grooved gel inserts for aligning epithelial cells during air-liquid-interface culture,” Biomaterials science, vol. 3, iss. 1, pp. 121-133, 2015.
    [Bibtex]
    @article{soleas_topographically_2015,
    title = {Topographically grooved gel inserts for aligning epithelial cells during air-liquid-interface culture},
    volume = {3},
    issn = {20474830 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84914147134&doi=10.1039%2fc4bm00237g&partnerID=40&md5=2f412efd5893246755f97e280a81dffe},
    doi = {10.1039/c4bm00237g},
    number = {1},
    journal = {Biomaterials Science},
    author = {Soleas, J. P. and Waddell, T. K. and McGuigan, A. P.},
    year = {2015},
    pages = {121--133}
    }
  • [DOI] R. L. Sontag, C. Mihai, G. Orr, A. Savchenko, T. Skarina, H. Cui, J. R. Cort, J. N. Adkins, and R. N. Brown, “Electroporation of functional bacterial effectors into mammalian cells,” Journal of visualized experiments, iss. 95, 2015.
    [Bibtex]
    @article{sontag_electroporation_2015,
    title = {Electroporation of functional bacterial effectors into mammalian cells},
    issn = {1940087X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84921652879&doi=10.3791%2f52296&partnerID=40&md5=a500e4b2531e752db0f4317885f06b55},
    doi = {10.3791/52296},
    number = {95},
    journal = {Journal of Visualized Experiments},
    author = {Sontag, R. L. and Mihai, C. and Orr, G. and Savchenko, A. and Skarina, T. and Cui, H. and Cort, J. R. and Adkins, J. N. and Brown, R. N.},
    year = {2015}
    }
  • [DOI] S. Srinivasan, W. R. Cluett, and R. Mahadevan, “Constructing kinetic models of metabolism at genome-scales: A review,” Biotechnology journal, vol. 10, iss. 9, pp. 1345-1359, 2015.
    [Bibtex]
    @article{srinivasan_constructing_2015,
    title = {Constructing kinetic models of metabolism at genome-scales: {A} review},
    volume = {10},
    issn = {18606768 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84940557767&doi=10.1002%2fbiot.201400522&partnerID=40&md5=272df642669276a8914ec718bd5dce4a},
    doi = {10.1002/biot.201400522},
    number = {9},
    journal = {Biotechnology Journal},
    author = {Srinivasan, S. and Cluett, W. R. and Mahadevan, R.},
    year = {2015},
    pages = {1345--1359}
    }
  • [DOI] P. J. Stogios, E. Evdokimova, M. Morar, K. Koteva, G. D. Wright, P. Courvalin, and A. Savchenko, “Structural and functional plasticity of antibiotic resistance nucleotidylyltransferases revealed by molecular characterization of lincosamide nucleotidylyltransferases Lnu(A) and Lnu(D),” Journal of molecular biology, vol. 427, iss. 12, pp. 2229-2243, 2015.
    [Bibtex]
    @article{stogios_structural_2015,
    title = {Structural and functional plasticity of antibiotic resistance nucleotidylyltransferases revealed by molecular characterization of lincosamide nucleotidylyltransferases {Lnu}({A}) and {Lnu}({D})},
    volume = {427},
    issn = {00222836 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84937763868&doi=10.1016%2fj.jmb.2015.04.008&partnerID=40&md5=2a565c7a563770be3ef53d0a1bc2f336},
    doi = {10.1016/j.jmb.2015.04.008},
    number = {12},
    journal = {Journal of Molecular Biology},
    author = {Stogios, P. J. and Evdokimova, E. and Morar, M. and Koteva, K. and Wright, G. D. and Courvalin, P. and Savchenko, A.},
    year = {2015},
    pages = {2229--2243}
    }
  • [DOI] S. Tabtabaei, D. G. B. Boocock, and L. L. Diosady, “Biodiesel Production from Mustard Emulsion by a Combined Destabilization/Adsorption Process,” Jaocs, journal of the american oil chemists’ society, vol. 92, iss. 8, pp. 1205-1217, 2015.
    [Bibtex]
    @article{tabtabaei_biodiesel_2015,
    title = {Biodiesel {Production} from {Mustard} {Emulsion} by a {Combined} {Destabilization}/{Adsorption} {Process}},
    volume = {92},
    issn = {0003021X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84938555826&doi=10.1007%2fs11746-015-2677-5&partnerID=40&md5=431f5bcd90d2903dcaffad9e98358b31},
    doi = {10.1007/s11746-015-2677-5},
    number = {8},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    author = {Tabtabaei, S. and Boocock, D. G. B. and Diosady, L. L.},
    year = {2015},
    pages = {1205--1217}
    }
  • [DOI] A. Tchigvintsev, H. Tran, A. Popovic, F. Kovacic, G. Brown, R. Flick, M. Hajighasemi, O. Egorova, J. C. Somody, D. Tchigvintsev, A. Khusnutdinova, T. N. Chernikova, O. V. Golyshina, M. M. Yakimov, A. Savchenko, P. N. Golyshin, K. E. Jaeger, and A. F. Yakunin, “The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes,” Applied microbiology and biotechnology, vol. 99, iss. 5, pp. 2165-2178, 2015.
    [Bibtex]
    @article{tchigvintsev_environment_2015,
    title = {The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes},
    volume = {99},
    issn = {01757598 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84923261245&doi=10.1007%2fs00253-014-6038-3&partnerID=40&md5=e167e38b85ce4a60394284dd820bc3de},
    doi = {10.1007/s00253-014-6038-3},
    number = {5},
    journal = {Applied Microbiology and Biotechnology},
    author = {Tchigvintsev, A. and Tran, H. and Popovic, A. and Kovacic, F. and Brown, G. and Flick, R. and Hajighasemi, M. and Egorova, O. and Somody, J. C. and Tchigvintsev, D. and Khusnutdinova, A. and Chernikova, T. N. and Golyshina, O. V. and Yakimov, M. M. and Savchenko, A. and Golyshin, P. N. and Jaeger, K. E. and Yakunin, A. F.},
    year = {2015},
    pages = {2165--2178}
    }
  • [DOI] S. Toh, D. Holbrook-Smith, P. J. Stogios, O. Onopriyenko, S. Lumba, Y. Tsuchiya, A. Savchenko, and P. McCourt, “Structure-function analysis identifies highly sensitive strigolactone receptors in Striga,” Science, vol. 350, iss. 6257, pp. 203-207, 2015.
    [Bibtex]
    @article{toh_structure-function_2015,
    title = {Structure-function analysis identifies highly sensitive strigolactone receptors in {Striga}},
    volume = {350},
    issn = {00368075 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84943534072&doi=10.1126%2fscience.aac9476&partnerID=40&md5=3ae8921722197862082f36d02a07c523},
    doi = {10.1126/science.aac9476},
    number = {6257},
    journal = {Science},
    author = {Toh, S. and Holbrook-Smith, D. and Stogios, P. J. and Onopriyenko, O. and Lumba, S. and Tsuchiya, Y. and Savchenko, A. and McCourt, P.},
    year = {2015},
    pages = {203--207}
    }
  • [DOI] A. Y. L. Tsai, R. E. Goacher, and E. R. Master, “Detecting changes in arabidopsis cell wall composition using time-of-flight secondary ion mass spectrometry,” Surface and interface analysis, vol. 47, iss. 5, pp. 626-631, 2015.
    [Bibtex]
    @article{tsai_detecting_2015,
    title = {Detecting changes in arabidopsis cell wall composition using time-of-flight secondary ion mass spectrometry},
    volume = {47},
    issn = {01422421 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84927910963&doi=10.1002%2fsia.5756&partnerID=40&md5=0bf54c911e46fbe3139ffc204719fbc7},
    doi = {10.1002/sia.5756},
    number = {5},
    journal = {Surface and Interface Analysis},
    author = {Tsai, A. Y. L. and Goacher, R. E. and Master, E. R.},
    year = {2015},
    pages = {626--631}
    }
  • [DOI] N. Venayak, N. Anesiadis, W. R. Cluett, and R. Mahadevan, “Engineering metabolism through dynamic control,” Current opinion in biotechnology, vol. 34, pp. 142-152, 2015.
    [Bibtex]
    @article{venayak_engineering_2015,
    title = {Engineering metabolism through dynamic control},
    volume = {34},
    issn = {09581669 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84921479351&doi=10.1016%2fj.copbio.2014.12.022&partnerID=40&md5=e5e133361b673480ee97b88d7da10f9a},
    doi = {10.1016/j.copbio.2014.12.022},
    journal = {Current Opinion in Biotechnology},
    author = {Venayak, N. and Anesiadis, N. and Cluett, W. R. and Mahadevan, R.},
    year = {2015},
    pages = {142--152}
    }
  • [DOI] J. Wallenius, N. Pahimanolis, J. Zoppe, P. Kilpeläinen, E. Master, H. Ilvesniemi, J. Seppälä, T. Eerikäinen, and H. Ojamo, “Continuous propionic acid production with Propionibacterium acidipropionici immobilized in a novel xylan hydrogel matrix,” Bioresource technology, vol. 197, pp. 1-6, 2015.
    [Bibtex]
    @article{wallenius_continuous_2015,
    title = {Continuous propionic acid production with {Propionibacterium} acidipropionici immobilized in a novel xylan hydrogel matrix},
    volume = {197},
    issn = {09608524 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84939814212&doi=10.1016%2fj.biortech.2015.08.037&partnerID=40&md5=e720adc9f748cb20c17d4ac6ea3c5c0c},
    doi = {10.1016/j.biortech.2015.08.037},
    journal = {Bioresource Technology},
    author = {Wallenius, J. and Pahimanolis, N. and Zoppe, J. and Kilpeläinen, P. and Master, E. and Ilvesniemi, H. and Seppälä, J. and Eerikäinen, T. and Ojamo, H.},
    year = {2015},
    pages = {1--6}
    }
  • [DOI] L. Yang, S. Srinivasan, R. Mahadevan, and W. R. Cluett, “Characterizing metabolic pathway diversification in the context of perturbation size,” Metabolic engineering, vol. 28, pp. 114-122, 2015.
    [Bibtex]
    @article{yang_characterizing_2015,
    title = {Characterizing metabolic pathway diversification in the context of perturbation size},
    volume = {28},
    issn = {10967176 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84921301913&doi=10.1016%2fj.ymben.2014.11.013&partnerID=40&md5=44ef76b4bebd8a5e82c86cba04376157},
    doi = {10.1016/j.ymben.2014.11.013},
    journal = {Metabolic Engineering},
    author = {Yang, L. and Srinivasan, S. and Mahadevan, R. and Cluett, W. R.},
    year = {2015},
    pages = {114--122}
    }

2014

  • [DOI] Y. Azimi, D. G. Allen, and R. R. Farnood, “Enhancing disinfection by advanced oxidation under UV irradiation in polyphosphate-containing wastewater flocs,” Water research, vol. 54, pp. 179-187, 2014.
    [Bibtex]
    @article{azimi_enhancing_2014,
    title = {Enhancing disinfection by advanced oxidation under {UV} irradiation in polyphosphate-containing wastewater flocs},
    volume = {54},
    issn = {00431354 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84894386519&doi=10.1016%2fj.watres.2014.01.011&partnerID=40&md5=e83426f4ccd40b186626c7891ae8ade6},
    doi = {10.1016/j.watres.2014.01.011},
    journal = {Water Research},
    author = {Azimi, Y. and Allen, D. G. and Farnood, R. R.},
    year = {2014},
    pages = {179--187}
    }
  • [DOI] Y. Azimi, D. G. Allen, P. Seto, and R. Farnood, “Effect of activated sludge retention time, operating temperature, and influent phosphorus deficiency on floc physicochemical characteristics and UV disinfection,” Industrial and engineering chemistry research, vol. 53, iss. 31, pp. 12485-12493, 2014.
    [Bibtex]
    @article{azimi_effect_2014,
    title = {Effect of activated sludge retention time, operating temperature, and influent phosphorus deficiency on floc physicochemical characteristics and {UV} disinfection},
    volume = {53},
    issn = {08885885 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84905674377&doi=10.1021%2fie5012068&partnerID=40&md5=07895e5061edbe71e10069f15c20b8c9},
    doi = {10.1021/ie5012068},
    number = {31},
    journal = {Industrial and Engineering Chemistry Research},
    author = {Azimi, Y. and Allen, D. G. and Seto, P. and Farnood, R.},
    year = {2014},
    pages = {12485--12493}
    }
  • [DOI] J. Bajor, K. L. Tkaczuk, M. Chruszcz, H. Chapman, O. Kagan, A. Savchenko, and W. Minor, “The crystal structure of pyrimidine/thiamin biosynthesis precursor-like domain-containing protein CAE31940 from proteobacterium Bordetella bronchiseptica RB50, and evolutionary insight into the NMT1/THI5 family,” Journal of structural and functional genomics, vol. 15, iss. 2, pp. 73-81, 2014.
    [Bibtex]
    @article{bajor_crystal_2014,
    title = {The crystal structure of pyrimidine/thiamin biosynthesis precursor-like domain-containing protein {CAE}31940 from proteobacterium {Bordetella} bronchiseptica {RB}50, and evolutionary insight into the {NMT}1/{THI}5 family},
    volume = {15},
    issn = {1345711X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84904063577&doi=10.1007%2fs10969-014-9180-3&partnerID=40&md5=61d99b8bb7bba53e983b219833c76e33},
    doi = {10.1007/s10969-014-9180-3},
    number = {2},
    journal = {Journal of Structural and Functional Genomics},
    author = {Bajor, J. and Tkaczuk, K. L. and Chruszcz, M. and Chapman, H. and Kagan, O. and Savchenko, A. and Minor, W.},
    year = {2014},
    pages = {73--81}
    }
  • [DOI] N. Bourdakos, E. Marsili, and R. Mahadevan, “A defined co-culture of Geobacter sulfurreducens and Escherichia coli in a membrane-less microbial fuel cell,” Biotechnology and bioengineering, vol. 111, iss. 4, pp. 709-718, 2014.
    [Bibtex]
    @article{bourdakos_defined_2014,
    title = {A defined co-culture of {Geobacter} sulfurreducens and {Escherichia} coli in a membrane-less microbial fuel cell},
    volume = {111},
    issn = {00063592 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84894282258&doi=10.1002%2fbit.25137&partnerID=40&md5=1ee2cd44fbfd26b5d4898aafe4afd0c5},
    doi = {10.1002/bit.25137},
    number = {4},
    journal = {Biotechnology and Bioengineering},
    author = {Bourdakos, N. and Marsili, E. and Mahadevan, R.},
    year = {2014},
    pages = {709--718}
    }
  • [DOI] C. Chen, J. C. Joo, G. Brown, E. Stolnikova, A. S. Halavaty, A. Savchenko, W. F. Anderson, and A. F. Yakunin, “Structure-based mutational studies of substrate inhibition of betaine aldehyde dehydrogenase BetB from staphylococcus aureus,” Applied and environmental microbiology, vol. 80, iss. 13, pp. 3992-4002, 2014.
    [Bibtex]
    @article{chen_structure-based_2014,
    title = {Structure-based mutational studies of substrate inhibition of betaine aldehyde dehydrogenase {BetB} from staphylococcus aureus},
    volume = {80},
    issn = {00992240 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84902132974&doi=10.1128%2fAEM.00215-14&partnerID=40&md5=661067980e5a5006c0fa23ee2ccbcb91},
    doi = {10.1128/AEM.00215-14},
    number = {13},
    journal = {Applied and Environmental Microbiology},
    author = {Chen, C. and Joo, J. C. and Brown, G. and Stolnikova, E. and Halavaty, A. S. and Savchenko, A. and Anderson, W. F. and Yakunin, A. F.},
    year = {2014},
    pages = {3992--4002}
    }
  • [DOI] E. A. Edwards, “Breathing the unbreathable,” Science, vol. 346, iss. 6208, pp. 424-425, 2014.
    [Bibtex]
    @article{edwards_breathing_2014,
    title = {Breathing the unbreathable},
    volume = {346},
    issn = {00368075 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84908237145&doi=10.1126%2fscience.1261194&partnerID=40&md5=8c96b379a8eb696d42376096b1fcd8d7},
    doi = {10.1126/science.1261194},
    number = {6208},
    journal = {Science},
    author = {Edwards, E. A.},
    year = {2014},
    pages = {424--425}
    }
  • [DOI] A. Eletsky, K. Michalska, S. Houliston, Q. Zhang, M. D. Daily, X. Xu, H. Cui, A. Yee, A. Lemak, B. Wu, M. Garcia, M. C. Burnet, K. M. Meyer, U. K. Aryal, O. Sanchez, C. Ansong, R. Xiao, T. B. Acton, J. N. Adkins, G. T. Montelione, A. Joachimiak, C. H. Arrowsmith, A. Savchenko, T. Szyperski, and J. R. Cort, “Structural and functional characterization of DUF1471 domains of Salmonella proteins SrfN, YdgH/SssB, and YahO,” Plos one, vol. 9, iss. 7, 2014.
    [Bibtex]
    @article{eletsky_structural_2014,
    title = {Structural and functional characterization of {DUF}1471 domains of {Salmonella} proteins {SrfN}, {YdgH}/{SssB}, and {YahO}},
    volume = {9},
    issn = {19326203 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84904258220&doi=10.1371%2fjournal.pone.0101787&partnerID=40&md5=62ac60b90e9c205225a8501118719d6e},
    doi = {10.1371/journal.pone.0101787},
    number = {7},
    journal = {PLoS ONE},
    author = {Eletsky, A. and Michalska, K. and Houliston, S. and Zhang, Q. and Daily, M. D. and Xu, X. and Cui, H. and Yee, A. and Lemak, A. and Wu, B. and Garcia, M. and Burnet, M. C. and Meyer, K. M. and Aryal, U. K. and Sanchez, O. and Ansong, C. and Xiao, R. and Acton, T. B. and Adkins, J. N. and Montelione, G. T. and Joachimiak, A. and Arrowsmith, C. H. and Savchenko, A. and Szyperski, T. and Cort, J. R.},
    year = {2014}
    }
  • [DOI] A. Eshaghi, S. Shalhoub, P. Rosenfeld, A. Li, R. R. Higgins, P. J. Stogios, A. Savchenko, N. Bastien, Y. Li, C. Rotstein, and J. B. Gubbaya, “Multiple influenza a (H3n2) mutations conferring resistance to neuraminidase inhibitors in a bone marrow transplant recipient,” Antimicrobial agents and chemotherapy, vol. 58, iss. 12, pp. 7188-7197, 2014.
    [Bibtex]
    @article{eshaghi_multiple_2014,
    title = {Multiple influenza a ({H}3N2) mutations conferring resistance to neuraminidase inhibitors in a bone marrow transplant recipient},
    volume = {58},
    issn = {00664804 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84912058790&doi=10.1128%2fAAC.03667-14&partnerID=40&md5=5471385ea297a397dc9aaac3e0879a00},
    doi = {10.1128/AAC.03667-14},
    number = {12},
    journal = {Antimicrobial Agents and Chemotherapy},
    author = {Eshaghi, A. and Shalhoub, S. and Rosenfeld, P. and Li, A. and Higgins, R. R. and Stogios, P. J. and Savchenko, A. and Bastien, N. and Li, Y. and Rotstein, C. and Gubbaya, J. B.},
    year = {2014},
    pages = {7188--7197}
    }
  • [DOI] E. V. Filippova, K. L. Tkaczuk, M. Chruszcz, X. Xu, A. Savchenko, A. Edwards, and W. Minor, “Structural characterization of the putative ABC-type 2 transporter from Thermotoga maritima MSB8,” Journal of structural and functional genomics, vol. 15, iss. 4, pp. 215-222, 2014.
    [Bibtex]
    @article{filippova_structural_2014,
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    author = {Filippova, E. V. and Tkaczuk, K. L. and Chruszcz, M. and Xu, X. and Savchenko, A. and Edwards, A. and Minor, W.},
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    @article{gawand_engineering_2014,
    title = {Engineering {Escherichia} coli for {D}-ribose production from glucose-xylose mixtures},
    volume = {10},
    issn = {15509087 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84898909919&doi=10.1089%2find.2013.0028&partnerID=40&md5=15a3db6920cfb233f7fa232c58d88f90},
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    @article{halavaty_type_2014,
    title = {Type {III} effector {NleH}2 from {Escherichia} coli {O}157:{H}7 str. {Sakai} features an atypical protein kinase domain},
    volume = {53},
    issn = {00062960 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84899449471&doi=10.1021%2fbi500016j&partnerID=40&md5=9a67b28f07f6fd9140d8bc677698d869},
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    title = {Analysis of the {Phlebiopsis} gigantea {Genome}, {Transcriptome} and {Secretome} {Provides} {Insight} into {Its} {Pioneer} {Colonization} {Strategies} of {Wood}},
    volume = {10},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84919682712&doi=10.1371%2fjournal.pgen.1004759&partnerID=40&md5=d82c7237315a966c2ef957c5d38dfcc4},
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    @article{hoyland_structure_2014,
    title = {Structure of the {LdcB} {LD}-carboxypeptidase reveals the molecular basis of peptidoglycan recognition},
    volume = {22},
    issn = {09692126 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84904103328&doi=10.1016%2fj.str.2014.04.015&partnerID=40&md5=580eba134d85489ab4eab1987f406af3},
    doi = {10.1016/j.str.2014.04.015},
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    journal = {Structure},
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    number = {1},
    journal = {Biotechnology for Biofuels},
    author = {Jeremic, D. and Goacher, R. E. and Yan, R. and Karunakaran, C. and Master, E. R.},
    year = {2014}
    }
  • [DOI] S. D. Justicia-Leon, S. Higgins, E. E. Mack, D. R. Griffiths, S. Tang, E. A. Edwards, and F. E. Löffler, “Bioaugmentation with distinct Dehalobacter strains achieves chloroform detoxification in microcosms,” Environmental science and technology, vol. 48, iss. 3, pp. 1851-1858, 2014.
    [Bibtex]
    @article{justicia-leon_bioaugmentation_2014,
    title = {Bioaugmentation with distinct {Dehalobacter} strains achieves chloroform detoxification in microcosms},
    volume = {48},
    issn = {0013936X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84893624362&doi=10.1021%2fes403582f&partnerID=40&md5=f149c0a2588d339fe026b07494ff0d03},
    doi = {10.1021/es403582f},
    number = {3},
    journal = {Environmental Science and Technology},
    author = {Justicia-Leon, S. D. and Higgins, S. and Mack, E. E. and Griffiths, D. R. and Tang, S. and Edwards, E. A. and Löffler, F. E.},
    year = {2014},
    pages = {1851--1858}
    }
  • [DOI] N. Karuna, L. Zhang, J. H. Walton, M. Couturier, M. H. Oztop, E. R. Master, M. J. McCarthy, and T. Jeoh, “The impact of alkali pretreatment and post-pretreatment conditioning on the surface properties of rice straw affecting cellulose accessibility to cellulases,” Bioresource technology, vol. 167, pp. 232-240, 2014.
    [Bibtex]
    @article{karuna_impact_2014,
    title = {The impact of alkali pretreatment and post-pretreatment conditioning on the surface properties of rice straw affecting cellulose accessibility to cellulases},
    volume = {167},
    issn = {09608524 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84903484247&doi=10.1016%2fj.biortech.2014.05.122&partnerID=40&md5=751bf845ccdf6dbec4ad75d70cc057f2},
    doi = {10.1016/j.biortech.2014.05.122},
    journal = {Bioresource Technology},
    author = {Karuna, N. and Zhang, L. and Walton, J. H. and Couturier, M. and Oztop, M. H. and Master, E. R. and McCarthy, M. J. and Jeoh, T.},
    year = {2014},
    pages = {232--240}
    }
  • [DOI] M. Latha Gandla, M. Derba-Maceluch, X. Liu, L. Gerber, E. R. Master, E. J. Mellerowicz, and L. J. Jönsson, “Expression of a fungal glucuronoyl esterase in Populus: Effects on wood properties and saccharification efficiency,” Phytochemistry, 2014.
    [Bibtex]
    @article{latha_gandla_expression_2014,
    title = {Expression of a fungal glucuronoyl esterase in {Populus}: {Effects} on wood properties and saccharification efficiency},
    issn = {00319422 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84903420130&doi=10.1016%2fj.phytochem.2014.06.002&partnerID=40&md5=04c961a00da01a092948bf22689c3611},
    doi = {10.1016/j.phytochem.2014.06.002},
    journal = {Phytochemistry},
    author = {Latha Gandla, M. and Derba-Maceluch, M. and Liu, X. and Gerber, L. and Master, E. R. and Mellerowicz, E. J. and Jönsson, L. J.},
    year = {2014}
    }
  • [DOI] S. Lemak, B. Nocek, N. Beloglazova, T. Skarina, R. Flick, G. Brown, A. Joachimiak, A. Savchenko, and A. F. Yakunin, “The CRISPR-associated Cas4 protein Pcal 0546 from Pyrobaculum calidifontis contains a [2fe-2s] cluster: Crystal structure and nuclease activity,” Nucleic acids research, vol. 42, iss. 17, pp. 11144-11155, 2014.
    [Bibtex]
    @article{lemak_crispr-associated_2014,
    title = {The {CRISPR}-associated {Cas}4 protein {Pcal} 0546 from {Pyrobaculum} calidifontis contains a [2Fe-2S] cluster: {Crystal} structure and nuclease activity},
    volume = {42},
    issn = {03051048 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84945540442&doi=10.1093%2fnar%2fgku797&partnerID=40&md5=f673db4e56f8bba22584c2b78326fb01},
    doi = {10.1093/nar/gku797},
    number = {17},
    journal = {Nucleic Acids Research},
    author = {Lemak, S. and Nocek, B. and Beloglazova, N. and Skarina, T. and Flick, R. and Brown, G. and Joachimiak, A. and Savchenko, A. and Yakunin, A. F.},
    year = {2014},
    pages = {11144--11155}
    }
  • [DOI] C. Londono, M. J. Loureiro, B. Slater, P. B. Lücker, J. Soleas, S. Sathananthan, J. S. Aitchison, A. J. Kabla, and A. P. McGuigan, “Nonautonomous contact guidance signaling during collective cell migration,” Proceedings of the national academy of sciences of the united states of america, vol. 111, iss. 5, pp. 1807-1812, 2014.
    [Bibtex]
    @article{londono_nonautonomous_2014,
    title = {Nonautonomous contact guidance signaling during collective cell migration},
    volume = {111},
    issn = {00278424 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84893447129&doi=10.1073%2fpnas.1321852111&partnerID=40&md5=b6b358aca715d154b312fbe3dee66e94},
    doi = {10.1073/pnas.1321852111},
    number = {5},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    author = {Londono, C. and Loureiro, M. J. and Slater, B. and Lücker, P. B. and Soleas, J. and Sathananthan, S. and Aitchison, J. S. and Kabla, A. J. and McGuigan, A. P.},
    year = {2014},
    pages = {1807--1812}
    }
  • [DOI] M. Loza-Correa, T. Sahr, M. Rolando, C. Daniels, P. Petit, T. Skarina, L. Gomez Valero, D. Dervins-Ravault, N. Honoré, A. Savchenko, and C. Buchrieser, “The Legionella pneumophila kai operon is implicated in stress response and confers fitness in competitive environments,” Environmental microbiology, vol. 16, iss. 2, pp. 359-381, 2014.
    [Bibtex]
    @article{loza-correa_legionella_2014,
    title = {The {Legionella} pneumophila kai operon is implicated in stress response and confers fitness in competitive environments},
    volume = {16},
    issn = {14622912 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84892958675&doi=10.1111%2f1462-2920.12223&partnerID=40&md5=7ed647c71583fa8c69fcc5c822e3ad75},
    doi = {10.1111/1462-2920.12223},
    number = {2},
    journal = {Environmental Microbiology},
    author = {Loza-Correa, M. and Sahr, T. and Rolando, M. and Daniels, C. and Petit, P. and Skarina, T. and Gomez Valero, L. and Dervins-Ravault, D. and Honoré, N. and Savchenko, A. and Buchrieser, C.},
    year = {2014},
    pages = {359--381}
    }
  • [DOI] P. B. Lücker, S. Javaherian, J. P. Soleas, D. Halverson, P. W. Zandstra, and A. P. McGuigan, “A microgroove patterned multiwell cell culture plate for high-throughput studies of cell alignment,” Biotechnology and bioengineering, vol. 111, iss. 12, pp. 2537-2548, 2014.
    [Bibtex]
    @article{lucker_microgroove_2014,
    title = {A microgroove patterned multiwell cell culture plate for high-throughput studies of cell alignment},
    volume = {111},
    issn = {00063592 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84918789587&doi=10.1002%2fbit.25298&partnerID=40&md5=ea88e363933e1f59cd709a3444ac5cfd},
    doi = {10.1002/bit.25298},
    number = {12},
    journal = {Biotechnology and Bioengineering},
    author = {Lücker, P. B. and Javaherian, S. and Soleas, J. P. and Halverson, D. and Zandstra, P. W. and McGuigan, A. P.},
    year = {2014},
    pages = {2537--2548}
    }
  • [DOI] F. Luo, R. Gitiafroz, C. E. Devine, Y. Gong, L. A. Hug, L. Raskin, and E. A. Edwards, “Metatranscriptome of an anaerobic benzene-degrading, nitrate-reducing enrichment culture reveals involvement of carboxylation in benzene ring activation,” Applied and environmental microbiology, vol. 80, iss. 14, pp. 4095-4107, 2014.
    [Bibtex]
    @article{luo_metatranscriptome_2014,
    title = {Metatranscriptome of an anaerobic benzene-degrading, nitrate-reducing enrichment culture reveals involvement of carboxylation in benzene ring activation},
    volume = {80},
    issn = {00992240 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84903134555&doi=10.1128%2fAEM.00717-14&partnerID=40&md5=d0ea02d53abb77523a58283d5618e5c9},
    doi = {10.1128/AEM.00717-14},
    number = {14},
    journal = {Applied and Environmental Microbiology},
    author = {Luo, F. and Gitiafroz, R. and Devine, C. E. and Gong, Y. and Hug, L. A. and Raskin, L. and Edwards, E. A.},
    year = {2014},
    pages = {4095--4107}
    }
  • [DOI] T. Meyer and E. A. Edwards, “Anaerobic digestion of pulp and paper mill wastewater and sludge,” Water research, vol. 65, pp. 321-349, 2014.
    [Bibtex]
    @article{meyer_anaerobic_2014,
    title = {Anaerobic digestion of pulp and paper mill wastewater and sludge},
    volume = {65},
    issn = {00431354 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84906270487&doi=10.1016%2fj.watres.2014.07.022&partnerID=40&md5=5f49473c7398f53c005c91ea3ba884ba},
    doi = {10.1016/j.watres.2014.07.022},
    journal = {Water Research},
    author = {Meyer, T. and Edwards, E. A.},
    year = {2014},
    pages = {321--349}
    }
  • [DOI] D. Meziane-Cherif, P. J. Stogios, E. Evdokimova, A. Savchenko, and P. Courvalin, “Structural basis for the evolution of vancomycin resistance D,D-peptidases,” Proceedings of the national academy of sciences of the united states of america, vol. 111, iss. 16, pp. 5872-5877, 2014.
    [Bibtex]
    @article{meziane-cherif_structural_2014,
    title = {Structural basis for the evolution of vancomycin resistance {D},{D}-peptidases},
    volume = {111},
    issn = {00278424 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84899110665&doi=10.1073%2fpnas.1402259111&partnerID=40&md5=4e8091660ee4fbe2b6e17f07542c00d2},
    doi = {10.1073/pnas.1402259111},
    number = {16},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    author = {Meziane-Cherif, D. and Stogios, P. J. and Evdokimova, E. and Savchenko, A. and Courvalin, P.},
    year = {2014},
    pages = {5872--5877}
    }
  • [DOI] A. C. Paz, J. Soleas, J. C. H. Poon, D. Trieu, T. K. Waddell, and A. P. McGuigan, “Challenges and opportunities for tissue-engineering polarized epithelium,” Tissue engineering – part b: reviews, vol. 20, iss. 1, pp. 56-72, 2014.
    [Bibtex]
    @article{paz_challenges_2014,
    title = {Challenges and opportunities for tissue-engineering polarized epithelium},
    volume = {20},
    issn = {19373368 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84893557502&doi=10.1089%2ften.teb.2013.0144&partnerID=40&md5=b6f3d0b4940c98989b6b5b90abbfad26},
    doi = {10.1089/ten.teb.2013.0144},
    number = {1},
    journal = {Tissue Engineering - Part B: Reviews},
    author = {Paz, A. C. and Soleas, J. and Poon, J. C. H. and Trieu, D. and Waddell, T. K. and McGuigan, A. P.},
    year = {2014},
    pages = {56--72}
    }
  • [DOI] A. Pérez-De-Mora, A. Zila, M. L. McMaster, and E. A. Edwards, “Bioremediation of chlorinated ethenes in fractured bedrock and associated changes in dechlorinating and nondechlorinating microbial populations,” Environmental science and technology, vol. 48, iss. 10, pp. 5770-5779, 2014.
    [Bibtex]
    @article{perez-de-mora_bioremediation_2014,
    title = {Bioremediation of chlorinated ethenes in fractured bedrock and associated changes in dechlorinating and nondechlorinating microbial populations},
    volume = {48},
    issn = {0013936X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84901020322&doi=10.1021%2fes404122y&partnerID=40&md5=dc76e3d6301420d14cba1472a6073af3},
    doi = {10.1021/es404122y},
    number = {10},
    journal = {Environmental Science and Technology},
    author = {Pérez-De-Mora, A. and Zila, A. and McMaster, M. L. and Edwards, E. A.},
    year = {2014},
    pages = {5770--5779}
    }
  • [DOI] M. Pourbafrani, J. McKechnie, T. Shen, B. A. Saville, and H. L. Maclean, “Impacts of pre-treatment technologies and co-products on greenhouse gas emissions and energy use of lignocellulosic ethanol production,” Journal of cleaner production, vol. 78, pp. 104-111, 2014.
    [Bibtex]
    @article{pourbafrani_impacts_2014,
    title = {Impacts of pre-treatment technologies and co-products on greenhouse gas emissions and energy use of lignocellulosic ethanol production},
    volume = {78},
    issn = {09596526 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84904249098&doi=10.1016%2fj.jclepro.2014.04.050&partnerID=40&md5=c60ad9367fb553747b5ea47358a33b2d},
    doi = {10.1016/j.jclepro.2014.04.050},
    journal = {Journal of Cleaner Production},
    author = {Pourbafrani, M. and McKechnie, J. and Shen, T. and Saville, B. A. and Maclean, H. L.},
    year = {2014},
    pages = {104--111}
    }
  • [DOI] N. Prapakornwiriya and L. L. Diosady, “Recovery of sinapic acid from the waste effluent of mustard protein isolation by ion exchange chromatography,” Jaocs, journal of the american oil chemists’ society, vol. 91, iss. 2, pp. 357-362, 2014.
    [Bibtex]
    @article{prapakornwiriya_recovery_2014,
    title = {Recovery of sinapic acid from the waste effluent of mustard protein isolation by ion exchange chromatography},
    volume = {91},
    issn = {0003021X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84893874895&doi=10.1007%2fs11746-013-2366-1&partnerID=40&md5=db0bafb959cd6ecfce3a1f261ba622e0},
    doi = {10.1007/s11746-013-2366-1},
    number = {2},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    author = {Prapakornwiriya, N. and Diosady, L. L.},
    year = {2014},
    pages = {357--362}
    }
  • [DOI] P. J. Schnurr, G. S. Espie, and D. G. Allen, “The effect of light direction and suspended cell concentrations on algal biofilm growth rates,” Applied microbiology and biotechnology, vol. 98, iss. 20, pp. 8553-8562, 2014.
    [Bibtex]
    @article{schnurr_effect_2014,
    title = {The effect of light direction and suspended cell concentrations on algal biofilm growth rates},
    volume = {98},
    issn = {01757598 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84919913856&doi=10.1007%2fs00253-014-5964-4&partnerID=40&md5=4663d3ed4533c329b4ac868ead4875a0},
    doi = {10.1007/s00253-014-5964-4},
    number = {20},
    journal = {Applied Microbiology and Biotechnology},
    author = {Schnurr, P. J. and Espie, G. S. and Allen, D. G.},
    year = {2014},
    pages = {8553--8562}
    }
  • [DOI] S. Sinichi and L. L. Diosady, “Isopropyl Alcohol Extraction of De-hulled Yellow Mustard Flour,” Jaocs, journal of the american oil chemists’ society, vol. 91, iss. 12, pp. 2143-2153, 2014.
    [Bibtex]
    @article{sinichi_isopropyl_2014,
    title = {Isopropyl {Alcohol} {Extraction} of {De}-hulled {Yellow} {Mustard} {Flour}},
    volume = {91},
    issn = {0003021X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84925488764&doi=10.1007%2fs11746-014-2556-5&partnerID=40&md5=9be08b7b6f4161bab357c1a9b281a320},
    doi = {10.1007/s11746-014-2556-5},
    number = {12},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    author = {Sinichi, S. and Diosady, L. L.},
    year = {2014},
    pages = {2143--2153}
    }
  • [DOI] P. J. Stogios, M. L. Kuhn, E. Evdokimova, P. Courvalin, W. F. Anderson, and A. Savchenko, “Potential for reduction of streptogramin a resistance revealed by structural analysis of acetyltransferase VatA,” Antimicrobial agents and chemotherapy, vol. 58, iss. 12, pp. 7083-7092, 2014.
    [Bibtex]
    @article{stogios_potential_2014,
    title = {Potential for reduction of streptogramin a resistance revealed by structural analysis of acetyltransferase {VatA}},
    volume = {58},
    issn = {00664804 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84912535991&doi=10.1128%2fAAC.03743-14&partnerID=40&md5=908d25f847104d80af3263acf98554df},
    doi = {10.1128/AAC.03743-14},
    number = {12},
    journal = {Antimicrobial Agents and Chemotherapy},
    author = {Stogios, P. J. and Kuhn, M. L. and Evdokimova, E. and Courvalin, P. and Anderson, W. F. and Savchenko, A.},
    year = {2014},
    pages = {7083--7092}
    }
  • [DOI] H. Suzuki, T. V. Vuong, Y. Gong, K. Chan, C. Y. Ho, E. R. Master, and A. Kondo, “Sequence diversity and gene expression analyses of expansin-related proteins in the white-rot basidiomycete, Phanerochaete carnosa,” Fungal genetics and biology, vol. 72, pp. 115-123, 2014.
    [Bibtex]
    @article{suzuki_sequence_2014,
    title = {Sequence diversity and gene expression analyses of expansin-related proteins in the white-rot basidiomycete, {Phanerochaete} carnosa},
    volume = {72},
    issn = {10871845 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84908502901&doi=10.1016%2fj.fgb.2014.05.008&partnerID=40&md5=6aa518cbff54549bb47c68183b805f18},
    doi = {10.1016/j.fgb.2014.05.008},
    journal = {Fungal Genetics and Biology},
    author = {Suzuki, H. and Vuong, T. V. and Gong, Y. and Chan, K. and Ho, C. Y. and Master, E. R. and Kondo, A.},
    year = {2014},
    pages = {115--123}
    }
  • [DOI] S. Tabtabaei, D. G. B. Boocock, and L. L. Diosady, “Biodiesel feedstock from emulsions produced by aqueous processing of yellow mustard,” Jaocs, journal of the american oil chemists’ society, vol. 91, iss. 7, pp. 1269-1282, 2014.
    [Bibtex]
    @article{tabtabaei_biodiesel_2014,
    title = {Biodiesel feedstock from emulsions produced by aqueous processing of yellow mustard},
    volume = {91},
    issn = {0003021X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84903760584&doi=10.1007%2fs11746-014-2448-8&partnerID=40&md5=af5045008ac89d2951dea8e53ad973aa},
    doi = {10.1007/s11746-014-2448-8},
    number = {7},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    author = {Tabtabaei, S. and Boocock, D. G. B. and Diosady, L. L.},
    year = {2014},
    pages = {1269--1282}
    }
  • [DOI] D. Trieu, T. K. Waddell, and A. P. McGuigan, “A microfluidic device to apply shear stresses to polarizing ciliated airway epithelium using air flow,” Biomicrofluidics, vol. 8, iss. 6, 2014.
    [Bibtex]
    @article{trieu_microfluidic_2014,
    title = {A microfluidic device to apply shear stresses to polarizing ciliated airway epithelium using air flow},
    volume = {8},
    issn = {19321058 (ISSN)},
    doi = {10.1063/1.4901930},
    number = {6},
    journal = {Biomicrofluidics},
    author = {Trieu, D. and Waddell, T. K. and McGuigan, A. P.},
    year = {2014}
    }
  • [DOI] T. V. Vuong and E. R. Master, “Fusion of a xylan-binding module to gluco- oligosaccharide oxidase increases activity and promotes stable immobilization,” Plos one, vol. 9, iss. 4, 2014.
    [Bibtex]
    @article{vuong_fusion_2014,
    title = {Fusion of a xylan-binding module to gluco- oligosaccharide oxidase increases activity and promotes stable immobilization},
    volume = {9},
    issn = {19326203 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84899671121&doi=10.1371%2fjournal.pone.0095170&partnerID=40&md5=4d5156ccf8b517ebf14e7042deb02f2c},
    doi = {10.1371/journal.pone.0095170 103109/104092382014889651},
    number = {4},
    journal = {PLoS ONE},
    author = {Vuong, T. V. and Master, E. R.},
    year = {2014}
    }
  • [DOI] W. Wang, G. Mai-Gisondi, P. J. Stogios, A. Kaur, X. Xu, H. Cui, O. Turunen, A. Savchenko, and E. R. Master, “Elucidation of the molecular basis for arabinoxylan-debranching activity of a thermostable family GH62 α-L-arabinofuranosidase from Streptomyces thermoviolaceus,” Applied and environmental microbiology, vol. 80, iss. 17, pp. 5317-5329, 2014.
    [Bibtex]
    @article{wang_elucidation_2014,
    title = {Elucidation of the molecular basis for arabinoxylan-debranching activity of a thermostable family {GH}62 α-{L}-arabinofuranosidase from {Streptomyces} thermoviolaceus},
    volume = {80},
    issn = {00992240 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84905923793&doi=10.1128%2fAEM.00685-14&partnerID=40&md5=b70306542a1b029affb2ebc062eeb57e},
    doi = {10.1128/AEM.00685-14},
    number = {17},
    journal = {Applied and Environmental Microbiology},
    author = {Wang, W. and Mai-Gisondi, G. and Stogios, P. J. and Kaur, A. and Xu, X. and Cui, H. and Turunen, O. and Savchenko, A. and Master, E. R.},
    year = {2014},
    pages = {5317--5329}
    }

2013

  • [DOI] M. Alcaide, J. Tornés, P. J. Stogios, X. Xu, C. Gertler, R. D. I. Leo, R. Bargiela, A. Lafraya, M. E. Guazzaroni, N. López-Cortés, T. N. Chernikova, O. V. Golyshina, T. Y. Nechitaylo, I. Plumeier, D. H. Pieper, M. M. Yakimov, A. Savchenko, P. N. Golyshin, and M. Ferrer, “Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the α/β hydrolase family,” Biochemical journal, vol. 454, iss. 1, pp. 157-166, 2013.
    [Bibtex]
    @article{alcaide_single_2013,
    title = {Single residues dictate the co-evolution of dual esterases: {MCP} hydrolases from the α/β hydrolase family},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84880858205&doi=10.1042%2fBJ20130552&partnerID=40&md5=56a787715315c477b77437b824d5f3e5},
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    title = {Analysis and design of a genetic circuit for dynamic metabolic engineering},
    volume = {2},
    issn = {21615063 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84882603873&doi=10.1021%2fsb300129j&partnerID=40&md5=468c2b11d469b0001506841ca4d00b89},
    doi = {10.1021/sb300129j},
    number = {8},
    journal = {ACS Synthetic Biology},
    author = {Anesiadis, N. and Kobayashi, H. and Cluett, W. R. and Mahadevan, R.},
    year = {2013},
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    [Bibtex]
    @article{azimi_uv_2013,
    title = {{UV} disinfection of wastewater flocs: {The} effect of secondary treatment conditions},
    volume = {67},
    issn = {02731223 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84880004058&doi=10.2166%2fwst.2013.148&partnerID=40&md5=16895f286a734d30664b1f993b1e0171},
    doi = {10.2166/wst.2013.148},
    number = {12},
    journal = {Water Science and Technology},
    author = {Azimi, Y. and Chen, X. and Allen, D. G. and Pileggi, V. and Seto, P. and Droppo, I. G. and Farnood, R. R.},
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    @article{beloglazova_nuclease_2013,
    title = {Nuclease activity of the human {SAMHD}1 protein implicated in the aicardi-goutières syndrome and {HIV}-1 restriction},
    volume = {288},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84874959500&doi=10.1074%2fjbc.M112.431148&partnerID=40&md5=ba30dd363abf7d9b1a3b8e99b533873e},
    doi = {10.1074/jbc.M112.431148},
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    journal = {Journal of Biological Chemistry},
    author = {Beloglazova, N. and Flick, R. and Tchigvintsev, A. and Brown, G. and Popovic, A. and Nocek, B. and Yakunin, A. F.},
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    @article{domagalski_structure_2013,
    title = {Structure of isochorismate synthase {DhbC} from {Bacillus} anthracis},
    volume = {69},
    issn = {17443091 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84883423921&doi=10.1107%2fS1744309113021246&partnerID=40&md5=aee3e67832182e071ecde40ad34f20fe},
    doi = {10.1107/S1744309113021246},
    number = {9},
    journal = {Acta Crystallographica Section F: Structural Biology and Crystallization Communications},
    author = {Domagalski, M. J. and Tkaczuk, K. L. and Chruszcz, M. and Skarina, T. and Onopriyenko, O. and Cymborowski, M. and Grabowski, M. and Savchenko, A. and Minor, W.},
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    @article{dumitrache_form_2013,
    title = {Form and function of {Clostridium} thermocellum biofilms},
    volume = {79},
    issn = {00992240 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84871906709&doi=10.1128%2fAEM.02563-12&partnerID=40&md5=2028fbe03b04703ab2ba4b3fc1d08ad9},
    doi = {10.1128/AEM.02563-12},
    number = {1},
    journal = {Applied and Environmental Microbiology},
    author = {Dumitrache, A. and Wolfaardt, G. and Allen, G. and Liss, S. N. and Lynd, L. R.},
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    @article{dumitrache_tracking_2013,
    title = {Tracking the cellulolytic activity of {Clostridium} thermocellum biofilms},
    volume = {6},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84888253787&doi=10.1186%2f1754-6834-6-175&partnerID=40&md5=03d16352787fc5b48453f90d609afcf3},
    doi = {10.1186/1754-6834-6-175},
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    journal = {Biotechnology for Biofuels},
    author = {Dumitrache, A. and Wolfaardt, G. M. and Allen, D. G. and Liss, S. N. and Lynd, L. R.},
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    @article{engel_meeting_2013,
    title = {Meeting report: 1st international functional metagenomics workshop may 7-8, 2012, {St}. {Jacobs}, {Ontario}, {Canada}},
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    doi = {10.4056/sigs.3406845},
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    title = {Novel approach to engineer strains for simultaneous sugar utilization},
    volume = {20},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84884962157&doi=10.1016%2fj.ymben.2013.08.003&partnerID=40&md5=8d150b08f24e6515048720de2934b2e7},
    doi = {10.1016/j.ymben.2013.08.003},
    journal = {Metabolic Engineering},
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    @article{goacher_towards_2013,
    title = {Towards practical time-of-flight secondary ion mass spectrometry lignocellulolytic enzyme assays},
    volume = {6},
    issn = {17546834 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84884327883&doi=10.1186%2f1754-6834-6-132&partnerID=40&md5=6447a51793d6643a6e91ce073bb38aa4},
    doi = {10.1186/1754-6834-6-132},
    number = {1},
    journal = {Biotechnology for Biofuels},
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    @article{gosling_analysis_2013,
    title = {Analysis and design of membrane structures: {Results} of a round robin exercise},
    volume = {48},
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    doi = {10.1016/j.engstruct.2012.10.008},
    journal = {Engineering Structures},
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    @article{hong_impact_2013,
    title = {Impact of cellulase production on environmental and financial metrics for lignocellulosic ethanol},
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    doi = {10.1002/bbb.1393},
    number = {3},
    journal = {Biofuels, Bioproducts and Biorefining},
    author = {Hong, Y. and Nizami, A. S. and Pour Bafrani, M. and Saville, B. A. and Maclean, H. L.},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84874609060&doi=10.1021%2fes3043092&partnerID=40&md5=6fe281b867c33cd04cad66fb55e99283},
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    number = {18},
    journal = {Applied and Environmental Microbiology},
    author = {Lienemann, M. and Gandier, J. A. and Joensuu, J. J. and Iwanaga, A. and Takatsuji, Y. and Haruyama, T. and Master, E. and Tenkanen, M. and Lindera, M. B.},
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    [Bibtex]
    @article{loffler_dehalococcoides_2013,
    title = {Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, {Dehalococcoidia} classis nov., order {Dehalococcoidales} ord. nov. and family {Dehalococcoidaceae} fam. nov., within the phylum {Chloroflexi}},
    volume = {63},
    issn = {14665026 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84874041126&doi=10.1099%2fijs.0.034926-0&partnerID=40&md5=984681177484fa8ca1af04bbb2d16b03},
    doi = {10.1099/ijs.0.034926-0},
    number = {PART2},
    journal = {International Journal of Systematic and Evolutionary Microbiology},
    author = {Löffler, F. E. and Yan, J. and Ritalahti, K. M. and Adrian, L. and Edwards, E. A. and Konstantinidis, K. T. and Müller, J. A. and Fullerton, H. and Zinder, S. H. and Spormann, A. M.},
    year = {2013},
    pages = {625--635}
    }
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    [Bibtex]
    @article{luk_ethanol_2013,
    title = {Ethanol or bioelectricity? {Life} cycle assessment of lignocellulosic bioenergy use in light-duty vehicles},
    volume = {47},
    issn = {0013936X (ISSN)},
    doi = {10.1021/es4006459},
    number = {18},
    journal = {Environmental Science and Technology},
    author = {Luk, J. M. and Pourbafrani, M. and Saville, B. A. and Maclean, H. L.},
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    pages = {10676--10684}
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    @article{martinez-martinez_biochemical_2013,
    title = {Biochemical diversity of carboxyl esterases and lipases from lake arreo ({Spain}): {A} metagenomic approach},
    volume = {79},
    issn = {00992240 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84878605968&doi=10.1128%2fAEM.00240-13&partnerID=40&md5=282071e297ea7a2a9aa55139a28a53fd},
    doi = {10.1128/AEM.00240-13},
    number = {12},
    journal = {Applied and Environmental Microbiology},
    author = {Martínez-Martínez, M. and Alcaide, M. and Tchigvintsev, A. and Reva, O. and Polaina, J. and Bargiela, R. and Guazzaroni, M. E. and Chicote, Á and Canet, A. and Valero, F. and Eguizabal, E. R. and Guerrero, M. C. and Yakunin, A. F. and Ferrer, M.},
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    @article{mowla_review_2013,
    title = {A review of the properties of biosludge and its relevance to enhanced dewatering processes},
    volume = {58},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84888848775&doi=10.1016%2fj.biombioe.2013.09.002&partnerID=40&md5=624b8ca8f6cb9b3df0ffd20a0a2cee7b},
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  • A. S. Nizami, B. A. Saville, and H. L. Maclean, “Anaerobic digesters: Perspectives and challenges,” in Bioenergy Production by Anaerobic Digestion: Using Agricultural Biomass and Organic Wastes, Taylor and Francis, 2013, pp. 139-151.
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    @incollection{nizami_anaerobic_2013,
    title = {Anaerobic digesters: {Perspectives} and challenges},
    isbn = {9780203137697 (ISBN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84918878881&doi=10.4324%2f9780203137697&partnerID=40&md5=8ab5c7ca13398581fdab54abdaeddeeb},
    booktitle = {Bioenergy {Production} by {Anaerobic} {Digestion}: {Using} {Agricultural} {Biomass} and {Organic} {Wastes}},
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    @article{pourbafrani_life_2013,
    title = {Life cycle greenhouse gas impacts of ethanol, biomethane and limonene production from citrus waste},
    volume = {8},
    issn = {17489326 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84876191146&doi=10.1088%2f1748-9326%2f8%2f1%2f015007&partnerID=40&md5=6b994a60131721507f69d407f444c52e},
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    title = {Characterizing metabolic interactions in a clostridial co-culture for consolidated bioprocessing},
    volume = {13},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84886741528&doi=10.1186%2f1472-6750-13-95&partnerID=40&md5=4cdc6251fed0a379aab16b2292de2e0d},
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    @article{schnurr_algae_2013,
    title = {Algae biofilm growth and the potential to stimulate lipid accumulation through nutrient starvation},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84876327993&doi=10.1016%2fj.biortech.2013.03.036&partnerID=40&md5=793b4dd4e8e0f109add3a06bc38683b8},
    doi = {10.1016/j.biortech.2013.03.036},
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    @article{sherif_biochemical_2013,
    title = {Biochemical studies of the multicopper oxidase (small laccase) from {Streptomyces} coelicolor using bioactive phytochemicals and site-directed mutagenesis},
    volume = {6},
    issn = {17517907 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84882279061&doi=10.1111%2f1751-7915.12068&partnerID=40&md5=e9274d9c2f0a9f7061b6c73ab29e93fa},
    doi = {10.1111/1751-7915.12068},
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    journal = {Microbial Biotechnology},
    author = {Sherif, M. and Waung, D. and Korbeci, B. and Mavisakalyan, V. and Flick, R. and Brown, G. and Abou-Zaid, M. and Yakunin, A. F. and Master, E. R.},
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    @article{singer_pathogen_2013,
    title = {A {Pathogen} {Type} {III} {Effector} with a {Novel} {E}3 {Ubiquitin} {Ligase} {Architecture}},
    volume = {9},
    issn = {15537366 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84875074459&doi=10.1371%2fjournal.ppat.1003121&partnerID=40&md5=82d819707ff313f69cbeca027a8e2adb},
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    @article{slater_algorithm_2013,
    title = {An algorithm to quantify correlated collective cell migration behavior},
    volume = {54},
    issn = {07366205 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84876485509&doi=10.2144%2f000113990&partnerID=40&md5=d684c9a02708b1fbca5ad5595d92e455},
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    @article{tabtabaei_destabilization_2013,
    title = {Destabilization of yellow mustard emulsion using organic solvents},
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    @article{tang_functional_2013,
    title = {Functional characterization of reductive dehalogenases by using blue native polyacrylamide gel electrophoresis},
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    number = {3},
    journal = {Biogeosciences},
    author = {Barlett, M. and Zhuang, K. and Mahadevan, R. and Lovley, D.},
    year = {2012},
    pages = {1033--1040}
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    [Bibtex]
    @article{chan_large_2012,
    title = {Large carbon isotope fractionation during biodegradation of chloroform by {Dehalobacter} cultures},
    volume = {46},
    issn = {0013936X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84866425570&doi=10.1021%2fes3010317&partnerID=40&md5=57c2f747ca012a57b3f3889de9fc056e},
    doi = {10.1021/es3010317},
    number = {18},
    journal = {Environmental Science and Technology},
    author = {Chan, C. C. H. and Mundle, S. O. C. and Eckert, T. and Liang, X. and Tang, S. and Lacrampe-Couloume, G. and Edwards, E. A. and Sherwood Lollar, B.},
    year = {2012},
    pages = {10154--10160}
    }
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    [Bibtex]
    @article{edwards_bacteria_2012,
    title = {Bacteria for remediating groundwater},
    volume = {34},
    issn = {10567194 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84891277699&partnerID=40&md5=2f102b5332c311d75225dcad83d4bc7f},
    number = {6},
    journal = {Industrial Bioprocessing},
    author = {Edwards, E.},
    year = {2012},
    pages = {6}
    }
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    [Bibtex]
    @article{facchini_synthetic_2012,
    title = {Synthetic biosystems for the production of high-value plant metabolites},
    volume = {30},
    issn = {01677799 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84858070612&doi=10.1016%2fj.tibtech.2011.10.001&partnerID=40&md5=4020a9ad4bf938b0943c73c64c8b2b32},
    doi = {10.1016/j.tibtech.2011.10.001},
    number = {3},
    journal = {Trends in Biotechnology},
    author = {Facchini, P. J. and Bohlmann, J. and Covello, P. S. and De Luca, V. and Mahadevan, R. and Page, J. E. and Ro, D. K. and Sensen, C. W. and Storms, R. and Martin, V. J. J.},
    year = {2012},
    pages = {127--131}
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    [Bibtex]
    @article{fernandez-fueyo_comparative_2012,
    title = {Comparative genomics of {Ceriporiopsis} subvermispora and {Phanerochaete} chrysosporium provide insight into selective ligninolysis ({Proceedings} of the {National} {Academy} of {Sciences} (2012) 109 (5458-5463) {DOI}: 10.1073/pnas. 1119912109)},
    volume = {109},
    issn = {00278424 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84861419905&doi=10.1073%2fpnas.1206295109&partnerID=40&md5=5f77993e73b222157991e07efb8a8509},
    doi = {10.1073/pnas.1206295109},
    number = {21},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    author = {Fernandez-Fueyo, E. and Ruiz-Dueñas, F. J. and Ferreira, P. and Floudas, D. and Hibbett, D. S. and Canessa, P. and Larrondo, L. F. and James, T. Y. and Seelenfreund, D. and Lobos, S. and Polanco, R. and Tello, M. and Honda, Y. and Watanabe, T. and Watanabe, T. and Ryu, J. S. and Kubicek, C. P. and Schmoll, M. and Gaskell, J. and Hammel, K. E. and St John, F. J. and Vanden Wymelenberg, A. and Sabat, G. and BonDurant, S. S. and Syed, K. and Yadav, J. S. and Doddapaneni, H. and Subramanian, V. and Lavín, J. L. and Oguiza, J. A. and Perez, G. and Pisabarro, A. G. and Ramirez, L. and Santoyo, F. and Master, E. and Coutinho, P. M. and Henrissat, B. and Lombard, V. and Magnuson, J. K. and Kües, U. and Hori, C. and Igarashi, K. and Samejima, M. and Held, B. W. and Barry, K. W. and LaButti, K. M. and Lapidus, A. and Lindquist, E. A. and Lucas, S. M. and Riley, R. and Salamov, A. A. and Hoffmeister, D. and Schwenk, D. and Hadar, Y. and Yarden, O. and De Vries, R. P. and Wiebenga, A. and Stenlid, J. and Eastwood, D. and Grigoriev, I. V. and Berka, R. M. and Blanchette, R. A. and Kersten, P. and Martinez, A. T. and Vicuna, R. and Cullen, D.},
    year = {2012},
    pages = {8352}
    }
  • [DOI] E. Fernandez-Fueyo, F. J. Ruiz-Dueñas, P. Ferreira, D. Floudas, D. S. Hibbett, P. Canessa, L. F. Larrondo, T. Y. James, D. Seelenfreund, S. Lobos, R. Polanco, M. Tello, Y. Honda, T. Watanabe, T. Watanabe, R. J. San, C. P. Kubicek, M. Schmoll, J. Gaskell, K. E. Hammel, F. J. St John, A. V. Wymelenberg, G. Sabat, S. S. BonDurant, K. Syed, J. S. Yadav, H. Doddapaneni, V. Subramanian, J. L. Laviń, J. A. Oguiza, G. Perez, A. G. Pisabarro, L. Ramirez, F. Santoyo, E. Master, P. M. Coutinho, B. Henrissat, V. Lombard, J. K. Magnuson, U. Kuës, C. Hori, K. Igarashi, M. Samejima, B. W. Held, K. W. Barry, K. M. LaButti, A. Lapidus, E. A. Lindquist, S. M. Lucas, R. Riley, A. A. Salamov, D. Hoffmeister, D. Schwenk, Y. Hadar, O. Yarden, R. P. De Vries, A. Wiebenga, J. Stenlid, D. Eastwood, I. V. Grigoriev, R. M. Berka, R. A. Blanchette, P. Kersten, A. T. Martinez, R. Vicuna, and D. Cullen, “Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis,” Proceedings of the national academy of sciences of the united states of america, vol. 109, iss. 14, pp. 5458-5463, 2012.
    [Bibtex]
    @article{fernandez-fueyo_comparative_2012-1,
    title = {Comparative genomics of {Ceriporiopsis} subvermispora and {Phanerochaete} chrysosporium provide insight into selective ligninolysis},
    volume = {109},
    issn = {00278424 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84859466995&doi=10.1073%2fpnas.1119912109&partnerID=40&md5=df2b2c468cff2e588de011977385ddcc},
    doi = {10.1073/pnas.1119912109},
    number = {14},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    author = {Fernandez-Fueyo, E. and Ruiz-Dueñas, F. J. and Ferreira, P. and Floudas, D. and Hibbett, D. S. and Canessa, P. and Larrondo, L. F. and James, T. Y. and Seelenfreund, D. and Lobos, S. and Polanco, R. and Tello, M. and Honda, Y. and Watanabe, T. and Watanabe, T. and San, R. J. and Kubicek, C. P. and Schmoll, M. and Gaskell, J. and Hammel, K. E. and St John, F. J. and Wymelenberg, A. V. and Sabat, G. and BonDurant, S. S. and Syed, K. and Yadav, J. S. and Doddapaneni, H. and Subramanian, V. and Laviń, J. L. and Oguiza, J. A. and Perez, G. and Pisabarro, A. G. and Ramirez, L. and Santoyo, F. and Master, E. and Coutinho, P. M. and Henrissat, B. and Lombard, V. and Magnuson, J. K. and Kuës, U. and Hori, C. and Igarashi, K. and Samejima, M. and Held, B. W. and Barry, K. W. and LaButti, K. M. and Lapidus, A. and Lindquist, E. A. and Lucas, S. M. and Riley, R. and Salamov, A. A. and Hoffmeister, D. and Schwenk, D. and Hadar, Y. and Yarden, O. and De Vries, R. P. and Wiebenga, A. and Stenlid, J. and Eastwood, D. and Grigoriev, I. V. and Berka, R. M. and Blanchette, R. A. and Kersten, P. and Martinez, A. T. and Vicuna, R. and Cullen, D.},
    year = {2012},
    pages = {5458--5463}
    }
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    [Bibtex]
    @article{garcia-becerra_wood_2012,
    title = {Wood adhesives based on alkaline extracts from wastewater biosolids and mustard protein},
    volume = {89},
    issn = {0003021X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84863777763&doi=10.1007%2fs11746-012-2024-z&partnerID=40&md5=6d8c760fce4ba85dc99201ebcd192b90},
    doi = {10.1007/s11746-012-2024-z},
    number = {7},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    author = {García-Becerra, F. Y. and Acosta, E. J. and Allen, D. G.},
    year = {2012},
    pages = {1315--1323}
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    @article{goacher_application_2012,
    title = {Application of time-of-flight-secondary ion mass spectrometry for the detection of enzyme activity on solid wood substrates},
    volume = {84},
    issn = {00032700 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84861178860&doi=10.1021%2fac3005346&partnerID=40&md5=ff98894f8a44f641658b15ecf2d469a6},
    doi = {10.1021/ac3005346},
    number = {10},
    journal = {Analytical Chemistry},
    author = {Goacher, R. E. and Edwards, E. A. and Yakunin, A. F. and Mims, C. A. and Master, E. R.},
    year = {2012},
    pages = {4443--4451}
    }
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    [Bibtex]
    @article{gonzalez_structure_2012,
    title = {Structure and activity of the {Pseudomonas} aeruginosa hotdog-fold thioesterases {PA}5202 and {PA}2801},
    volume = {444},
    issn = {02646021 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84862239276&doi=10.1042%2fBJ20112032&partnerID=40&md5=d8e555c37dd2c881eeba86b5bad0c7bd},
    doi = {10.1042/BJ20112032},
    number = {3},
    journal = {Biochemical Journal},
    author = {Gonzalez, C. F. and Tchigvintsev, A. and Brown, G. and Flick, R. and Evdokimova, E. and Xu, X. and Osipiuk, J. and Cuff, M. E. and Lynch, S. and Joachimiak, A. and Savchenko, A. and Yakunin, A. F.},
    year = {2012},
    pages = {445--455}
    }
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    @article{goral_crystal_2012,
    title = {Crystal structure of a putative isochorismatase hydrolase from {Oleispira} antarctica},
    volume = {13},
    issn = {1345711X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84858709594&doi=10.1007%2fs10969-012-9127-5&partnerID=40&md5=a7415475e4dab5120380c4f30c77e026},
    doi = {10.1007/s10969-012-9127-5},
    number = {1},
    journal = {Journal of Structural and Functional Genomics},
    author = {Goral, A. M. and Tkaczuk, K. L. and Chruszcz, M. and Kagan, O. and Savchenko, A. and Minor, W.},
    year = {2012},
    pages = {27--36}
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    @article{halavaty_structural_2012,
    title = {Structural characterization and comparison of three acyl-carrier-protein synthases from pathogenic bacteria},
    volume = {68},
    issn = {09074449 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84866706479&doi=10.1107%2fS0907444912029101&partnerID=40&md5=1f51c45ea361b414f1508f7abf1c34ed},
    doi = {10.1107/S0907444912029101},
    number = {10},
    journal = {Acta Crystallographica Section D: Biological Crystallography},
    author = {Halavaty, A. S. and Kim, Y. and Minasov, G. and Shuvalova, L. and Dubrovska, I. and Winsor, J. and Zhou, M. and Onopriyenko, O. and Skarina, T. and Papazisi, L. and Kwon, K. and Peterson, S. N. and Joachimiak, A. and Savchenko, A. and Anderson, W. F.},
    year = {2012},
    pages = {1359--1370}
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    @article{hou_structure_2012,
    title = {Structure of a short-chain dehydrogenase/reductase from {Bacillus} anthracis},
    volume = {68},
    issn = {17443091 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84862239275&doi=10.1107%2fS1744309112017939&partnerID=40&md5=1520480b604fc48e6363c6f7ac2dce4d},
    doi = {10.1107/S1744309112017939},
    number = {6},
    journal = {Acta Crystallographica Section F: Structural Biology and Crystallization Communications},
    author = {Hou, J. and Wojciechowska, K. and Zheng, H. and Chruszcz, M. and Cooper, D. R. and Cymborowski, M. and Skarina, T. and Gordon, E. and Luo, H. and Savchenko, A. and Minor, W.},
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    @article{hug_comparative_2012,
    title = {Comparative metagenomics of three {Dehalococcoides}-containing enrichment cultures: the role of the non-dechlorinating community},
    volume = {13},
    issn = {14712164 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84867609258&doi=10.1186%2f1471-2164-13-327&partnerID=40&md5=f2105844c80abd4fb1aadccd3843dd7f},
    doi = {10.1186/1471-2164-13-327},
    number = {1},
    journal = {BMC Genomics},
    author = {Hug, L. A. and Beiko, R. G. and Rowe, A. R. and Richardson, R. E. and Edwards, E. A.},
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    @article{jones_experiences_2012,
    title = {Experiences of care delivery: {Endometrial} cancer survivors at end of treatment},
    volume = {124},
    issn = {00908258 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84856734596&doi=10.1016%2fj.ygyno.2011.10.037&partnerID=40&md5=50e71379bfcdc6f248074b711586fca5},
    doi = {10.1016/j.ygyno.2011.10.037},
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    @article{jung_application_2012,
    title = {Application of a ternary phase diagram to the phase separation of oil-in-water emulsions using isopropyl alcohol},
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    [Bibtex]
    @article{mahajan_mode_2012,
    title = {Mode of coniferous wood decay by the white rot fungus {Phanerochaete} carnosa as elucidated by {FTIR} and {ToF}-{SIMS}},
    volume = {94},
    issn = {01757598 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84863851064&doi=10.1007%2fs00253-011-3830-1&partnerID=40&md5=eec2999b306fea74081a304e595f0091},
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    @article{mundle_monitoring_2012,
    title = {Monitoring biodegradation of ethene and bioremediation of chlorinated ethenes at a contaminated site using compound-specific isotope analysis ({CSIA})},
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    issn = {0013936X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84856715876&doi=10.1021%2fes202792x&partnerID=40&md5=621ca940a814bef24d85edce2ff14a08},
    doi = {10.1021/es202792x},
    number = {3},
    journal = {Environmental Science and Technology},
    author = {Mundle, S. O. C. and Johnson, T. and Lacrampe-Couloume, G. and Pérez-De-Mora, A. and Duhamel, M. and Edwards, E. A. and McMaster, M. L. and Cox, E. and Révész, K. and Sherwood Lollar, B.},
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    title = {Production of iron premix for the fortification of table salt},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84870549382&doi=10.1515%2f1556-3758.1284&partnerID=40&md5=74fb556c3dc988aebba06a25bc30e154},
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    @article{paz_micropatterning_2012,
    title = {Micropatterning co-cultures of epithelial cells on filter insert substrates},
    volume = {5},
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    @article{porebski_structural_2012,
    title = {Structural characterization of {Helicobacter} pylori dethiobiotin synthetase reveals differences between family members},
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    @article{sanscartier_electricity_2012,
    title = {Electricity production from anaerobic digestion of household organic waste in {Ontario}: {Techno}-economic and {GHG} emission analyses},
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    @article{shabalin_structure_2012,
    title = {Structure of anabolic ornithine carbamoyltransferase from {Campylobacter} jejuni at 2.7 Å resolution},
    volume = {68},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84865785700&doi=10.1107%2fS1744309112031259&partnerID=40&md5=ed8828c669cd42bfe978902a9d52667d},
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    journal = {Acta Crystallographica Section F: Structural Biology and Crystallization Communications},
    author = {Shabalin, I. G. and Porebski, P. J. and Cooper, D. R. and Grabowski, M. and Onopriyenko, O. and Grimshaw, S. and Savchenko, A. and Chruszcz, M. and Minor, W.},
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    @article{singer_structural_2012,
    title = {Structural analysis of {HopPmaL} reveals the presence of a second adaptor domain common to the {HopAB} family of pseudomonas syringae type {III} effectors},
    volume = {51},
    issn = {00062960 (ISSN)},
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    journal = {Biochemistry},
    author = {Singer, A. U. and Wu, B. and Yee, A. and Houliston, S. and Xu, X. and Cui, H. and Skarina, T. and Garcia, M. and Semesi, A. and Arrowsmith, C. H. and Savchenko, A.},
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    @article{soleas_engineering_2012,
    title = {Engineering airway epithelium},
    volume = {2012},
    issn = {11107243 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84858146350&doi=10.1155%2f2012%2f982971&partnerID=40&md5=fda11e7ba7be1d6d5d7c71b99b07b882},
    doi = {10.1155/2012/982971},
    journal = {Journal of Biomedicine and Biotechnology},
    author = {Soleas, J. P. and Paz, A. and Marcus, P. and McGuigan, A. and Waddell, T. K.},
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    @article{suzuki_comparative_2012,
    title = {Comparative genomics of the white-rot fungi, {Phanerochaete} carnosa and {P}. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize},
    volume = {13},
    issn = {14712164 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84865540130&doi=10.1186%2f1471-2164-13-444&partnerID=40&md5=8f159999b39382a8e0a7f84a1a71483b},
    doi = {10.1186/1471-2164-13-444},
    number = {1},
    journal = {BMC Genomics},
    author = {Suzuki, H. and MacDonald, J. and Syed, K. and Salamov, A. and Hori, C. and Aerts, A. and Henrissat, B. and Wiebenga, A. and vanKuyk, P. A. and Barry, K. and Lindquist, E. and LaButti, K. and Lapidus, A. and Lucas, S. and Coutinho, P. and Gong, Y. and Samejima, M. and Mahadevan, R. and Abou-Zaid, M. and de Vries, R. P. and Igarashi, K. and Yadav, J. S. and Grigoriev, I. V. and Master, E. R.},
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    @article{tabtabaei_isolation_2012,
    title = {The isolation of yellow mustard oil using water and cyclic ethers},
    volume = {89},
    issn = {0003021X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84861692163&doi=10.1007%2fs11746-011-1971-0&partnerID=40&md5=b35e6b521a4285f09f176ad0a6c6332d},
    doi = {10.1007/s11746-011-1971-0},
    number = {5},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    author = {Tabtabaei, S. and Diosady, L. L.},
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    @article{tang_semi-automatic_2012,
    title = {Semi-{Automatic} {In} {Silico} {Gap} {Closure} {Enabled} {De} {Novo} {Assembly} of {Two} {Dehalobacter} {Genomes} from {Metagenomic} {Data}},
    volume = {7},
    issn = {19326203 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84871353227&doi=10.1371%2fjournal.pone.0052038&partnerID=40&md5=8e0d6f37c2f2299e49d8c3cdffccdf3a},
    doi = {10.1371/journal.pone.0052038},
    number = {12},
    journal = {PLoS ONE},
    author = {Tang, S. and Gong, Y. and Edwards, E. A.},
    year = {2012}
    }
  • [DOI] A. Tchigvintsev, A. Singer, G. Brown, R. Flick, E. Evdokimova, K. Tan, C. F. Gonzalez, A. Savchenko, and A. F. Yakunin, “Biochemical and structural studies of uncharacterized protein PA0743 from Pseudomonas aeruginosa revealed NAD +-dependent L-Serine dehydrogenase,” Journal of biological chemistry, vol. 287, iss. 3, pp. 1874-1883, 2012.
    [Bibtex]
    @article{tchigvintsev_biochemical_2012,
    title = {Biochemical and structural studies of uncharacterized protein {PA}0743 from {Pseudomonas} aeruginosa revealed {NAD} +-dependent {L}-{Serine} dehydrogenase},
    volume = {287},
    issn = {00219258 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84863398742&doi=10.1074%2fjbc.M111.294561&partnerID=40&md5=96551a3959f676a16b3e86c6f5727b90},
    doi = {10.1074/jbc.M111.294561},
    number = {3},
    journal = {Journal of Biological Chemistry},
    author = {Tchigvintsev, A. and Singer, A. and Brown, G. and Flick, R. and Evdokimova, E. and Tan, K. and Gonzalez, C. F. and Savchenko, A. and Yakunin, A. F.},
    year = {2012},
    pages = {1874--1883}
    }
  • [DOI] A. Y. L. Tsai, T. Canam, A. Gorzsás, E. J. Mellerowicz, M. M. Campbell, and E. R. Master, “Constitutive expression of a fungal glucuronoyl esterase in Arabidopsis reveals altered cell wall composition and structure,” Plant biotechnology journal, vol. 10, iss. 9, pp. 1077-1087, 2012.
    [Bibtex]
    @article{tsai_constitutive_2012,
    title = {Constitutive expression of a fungal glucuronoyl esterase in {Arabidopsis} reveals altered cell wall composition and structure},
    volume = {10},
    issn = {14677644 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84868541084&doi=10.1111%2fj.1467-7652.2012.00735.x&partnerID=40&md5=58cb98878819600a0b04ae4ce4d1d060},
    doi = {10.1111/j.1467-7652.2012.00735.x},
    number = {9},
    journal = {Plant Biotechnology Journal},
    author = {Tsai, A. Y. L. and Canam, T. and Gorzsás, A. and Mellerowicz, E. J. and Campbell, M. M. and Master, E. R.},
    year = {2012},
    pages = {1077--1087}
    }
  • [DOI] D. D. Wagner, L. A. Hug, J. K. Hatt, M. R. Spitzmiller, E. Padilla-Crespo, K. M. Ritalahti, E. A. Edwards, K. T. Konstantinidis, and F. E. Löffler, “Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae,” Bmc genomics, vol. 13, iss. 1, 2012.
    [Bibtex]
    @article{wagner_genomic_2012,
    title = {Genomic determinants of organohalide-respiration in {Geobacter} lovleyi, an unusual member of the {Geobacteraceae}},
    volume = {13},
    issn = {14712164 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84861217829&doi=10.1186%2f1471-2164-13-200&partnerID=40&md5=b895061f6703a2e03ee94a80c9dc5278},
    doi = {10.1186/1471-2164-13-200},
    number = {1},
    journal = {BMC Genomics},
    author = {Wagner, D. D. and Hug, L. A. and Hatt, J. K. and Spitzmiller, M. R. and Padilla-Crespo, E. and Ritalahti, K. M. and Edwards, E. A. and Konstantinidis, K. T. and Löffler, F. E.},
    year = {2012}
    }
  • [DOI] A. S. Waller, L. A. Hug, K. Mo, D. R. Radford, K. L. Maxwell, and E. A. Edwards, “Transcriptional analysis of a Dehalococcoides-containing microbial consortium reveals prophage activation,” Applied and environmental microbiology, vol. 78, iss. 4, pp. 1178-1186, 2012.
    [Bibtex]
    @article{waller_transcriptional_2012,
    title = {Transcriptional analysis of a {Dehalococcoides}-containing microbial consortium reveals prophage activation},
    volume = {78},
    issn = {00992240 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84857080584&doi=10.1128%2fAEM.06416-11&partnerID=40&md5=51cd4232618f792752423047fad7cbcc},
    doi = {10.1128/AEM.06416-11},
    number = {4},
    journal = {Applied and Environmental Microbiology},
    author = {Waller, A. S. and Hug, L. A. and Mo, K. and Radford, D. R. and Maxwell, K. L. and Edwards, E. A.},
    year = {2012},
    pages = {1178--1186}
    }
  • [DOI] D. Yadava, Y. Olive Li, L. L. Diosady, and A. S. Wesley, “Optimisation of polymer coating process for microencapsulating ferrous fumarate for salt double fortification with iodine and iron,” Journal of microencapsulation, vol. 29, iss. 8, pp. 729-738, 2012.
    [Bibtex]
    @article{yadava_optimisation_2012,
    title = {Optimisation of polymer coating process for microencapsulating ferrous fumarate for salt double fortification with iodine and iron},
    volume = {29},
    issn = {02652048 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84869415746&doi=10.3109%2f02652048.2011.651493&partnerID=40&md5=0e164c1d3f2316816744b6d9494ac7c3},
    doi = {10.3109/02652048.2011.651493},
    number = {8},
    journal = {Journal of Microencapsulation},
    author = {Yadava, D. and Olive Li, Y. and Diosady, L. L. and Wesley, A. S.},
    year = {2012},
    pages = {729--738}
    }
  • [DOI] H. Zheng, E. V. Filippova, K. L. Tkaczuk, P. Dworzynski, M. Chruszcz, P. J. Porebski, Z. Wawrzak, O. Onopriyenko, M. Kudritska, S. Grimshaw, A. Savchenko, W. F. Anderson, and W. Minor, “Crystal structures of putative phosphoglycerate kinases from B. anthracis and C. jejuni,” Journal of structural and functional genomics, vol. 13, iss. 1, pp. 15-26, 2012.
    [Bibtex]
    @article{zheng_crystal_2012,
    title = {Crystal structures of putative phosphoglycerate kinases from {B}. anthracis and {C}. jejuni},
    volume = {13},
    issn = {1345711X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84858705206&doi=10.1007%2fs10969-012-9131-9&partnerID=40&md5=607244f1fe334b70060533c3bfdafc1f},
    doi = {10.1007/s10969-012-9131-9},
    number = {1},
    journal = {Journal of Structural and Functional Genomics},
    author = {Zheng, H. and Filippova, E. V. and Tkaczuk, K. L. and Dworzynski, P. and Chruszcz, M. and Porebski, P. J. and Wawrzak, Z. and Onopriyenko, O. and Kudritska, M. and Grimshaw, S. and Savchenko, A. and Anderson, W. F. and Minor, W.},
    year = {2012},
    pages = {15--26}
    }
  • [DOI] K. Zhuang, E. Ma, D. R. Lovley, and R. Mahadevan, “The design of long-term effective uranium bioremediation strategy using a community metabolic model,” Biotechnology and bioengineering, vol. 109, iss. 10, pp. 2475-2483, 2012.
    [Bibtex]
    @article{zhuang_design_2012,
    title = {The design of long-term effective uranium bioremediation strategy using a community metabolic model},
    volume = {109},
    issn = {00063592 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84865358026&doi=10.1002%2fbit.24528&partnerID=40&md5=b2d318e40b59ed73ce4df7d941d172d2},
    doi = {10.1002/bit.24528},
    number = {10},
    journal = {Biotechnology and Bioengineering},
    author = {Zhuang, K. and Ma, E. and Lovley, D. R. and Mahadevan, R.},
    year = {2012},
    pages = {2475--2483}
    }

2011

  • E. Acosta, L. Diosady, A. V. Rao, D. Rousseau, and C. Yip, “Self-emulsifying delivery systems and lipid transport,” in Lipids in Nanotechnology, Elsevier Inc., 2011, pp. 135-170.
    [Bibtex]
    @incollection{acosta_self-emulsifying_2011,
    title = {Self-emulsifying delivery systems and lipid transport},
    isbn = {9780128043455 (ISBN); 9780981893679 (ISBN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84901457332&doi=10.1016%2fB978-0-9818936-7-9.50009-3&partnerID=40&md5=dd39e399e4a306c1b02bbc34774ab0d7},
    booktitle = {Lipids in {Nanotechnology}},
    publisher = {Elsevier Inc.},
    author = {Acosta, E. and Diosady, L. and Rao, A. V. and Rousseau, D. and Yip, C.},
    year = {2011},
    note = {DOI: 10.1016/B978-0-9818936-7-9.50009-3},
    pages = {135--170}
    }
  • [DOI] M. Babu, N. Beloglazova, R. Flick, C. Graham, T. Skarina, B. Nocek, A. Gagarinova, O. Pogoutse, G. Brown, A. Binkowski, S. Phanse, A. Joachimiak, E. V. Koonin, A. Savchenko, A. Emili, J. Greenblatt, A. M. Edwards, and A. F. Yakunin, “A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair,” Molecular microbiology, vol. 79, iss. 2, pp. 484-502, 2011.
    [Bibtex]
    @article{babu_dual_2011,
    title = {A dual function of the {CRISPR}-{Cas} system in bacterial antivirus immunity and {DNA} repair},
    volume = {79},
    issn = {0950382X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78651083184&doi=10.1111%2fj.1365-2958.2010.07465.x&partnerID=40&md5=e2a30f02bba3e9427821cafb05b1fb13},
    doi = {10.1111/j.1365-2958.2010.07465.x},
    number = {2},
    journal = {Molecular Microbiology},
    author = {Babu, M. and Beloglazova, N. and Flick, R. and Graham, C. and Skarina, T. and Nocek, B. and Gagarinova, A. and Pogoutse, O. and Brown, G. and Binkowski, A. and Phanse, S. and Joachimiak, A. and Koonin, E. V. and Savchenko, A. and Emili, A. and Greenblatt, J. and Edwards, A. M. and Yakunin, A. F.},
    year = {2011},
    pages = {484--502}
    }
  • [DOI] N. Beloglazova, P. Petit, R. Flick, G. Brown, A. Savchenko, and A. F. Yakunin, “Structure and activity of the Cas3 HD nuclease MJ0384, an effector enzyme of the CRISPR interference,” Embo journal, vol. 30, iss. 22, pp. 4616-4627, 2011.
    [Bibtex]
    @article{beloglazova_structure_2011,
    title = {Structure and activity of the {Cas}3 {HD} nuclease {MJ}0384, an effector enzyme of the {CRISPR} interference},
    volume = {30},
    issn = {02614189 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-81255160844&doi=10.1038%2femboj.2011.377&partnerID=40&md5=52e12f6224891dce313ae59e867d67ae},
    doi = {10.1038/emboj.2011.377},
    number = {22},
    journal = {EMBO Journal},
    author = {Beloglazova, N. and Petit, P. and Flick, R. and Brown, G. and Savchenko, A. and Yakunin, A. F.},
    year = {2011},
    pages = {4616--4627}
    }
  • [DOI] E. Bester, O. Kroukamp, M. Hausner, E. A. Edwards, and G. M. Wolfaardt, “Biofilm form and function: Carbon availability affects biofilm architecture, metabolic activity and planktonic cell yield,” Journal of applied microbiology, vol. 110, iss. 2, pp. 387-398, 2011.
    [Bibtex]
    @article{bester_biofilm_2011,
    title = {Biofilm form and function: {Carbon} availability affects biofilm architecture, metabolic activity and planktonic cell yield},
    volume = {110},
    issn = {13645072 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78650993911&doi=10.1111%2fj.1365-2672.2010.04894.x&partnerID=40&md5=dde7088965f7207482e541d3cd13aee5},
    doi = {10.1111/j.1365-2672.2010.04894.x},
    number = {2},
    journal = {Journal of Applied Microbiology},
    author = {Bester, E. and Kroukamp, O. and Hausner, M. and Edwards, E. A. and Wolfaardt, G. M.},
    year = {2011},
    pages = {387--398}
    }
  • [DOI] P. W. Y. Chan, A. F. Yakunin, E. A. Edwards, and E. F. Pai, “Mapping the reaction coordinates of enzymatic defluorination,” Journal of the american chemical society, vol. 133, iss. 19, pp. 7461-7468, 2011.
    [Bibtex]
    @article{chan_mapping_2011,
    title = {Mapping the reaction coordinates of enzymatic defluorination},
    volume = {133},
    issn = {00027863 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79955928285&doi=10.1021%2fja200277d&partnerID=40&md5=12446b318f5fc301ee6eca1ee8f1a10a},
    doi = {10.1021/ja200277d},
    number = {19},
    journal = {Journal of the American Chemical Society},
    author = {Chan, P. W. Y. and Yakunin, A. F. and Edwards, E. A. and Pai, E. F.},
    year = {2011},
    pages = {7461--7468}
    }
  • [DOI] W. W. M. Chan, A. Grostern, F. E. Löffler, and E. A. Edwards, “Quantifying the effects of 1,1,1-trichloroethane and 1,1-dichloroethane on chlorinated ethene reductive dehalogenases,” Environmental science and technology, vol. 45, iss. 22, pp. 9693-9702, 2011.
    [Bibtex]
    @article{chan_quantifying_2011,
    title = {Quantifying the effects of 1,1,1-trichloroethane and 1,1-dichloroethane on chlorinated ethene reductive dehalogenases},
    volume = {45},
    issn = {0013936X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-81055124288&doi=10.1021%2fes201260n&partnerID=40&md5=fc353553c704775a26c12adb4d8d33f5},
    doi = {10.1021/es201260n},
    number = {22},
    journal = {Environmental Science and Technology},
    author = {Chan, W. W. M. and Grostern, A. and Löffler, F. E. and Edwards, E. A.},
    year = {2011},
    pages = {9693--9702}
    }
  • [DOI] M. F. Clasquin, E. Melamud, A. Singer, J. R. Gooding, X. Xu, A. Dong, H. Cui, S. R. Campagna, A. Savchenko, A. F. Yakunin, J. D. Rabinowitz, and A. A. Caudy, “Riboneogenesis in yeast,” Cell, vol. 145, iss. 6, pp. 969-980, 2011.
    [Bibtex]
    @article{clasquin_riboneogenesis_2011,
    title = {Riboneogenesis in yeast},
    volume = {145},
    issn = {00928674 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79958281553&doi=10.1016%2fj.cell.2011.05.022&partnerID=40&md5=6131f82cf730a49ff7ef3ed25f80a8d3},
    doi = {10.1016/j.cell.2011.05.022},
    number = {6},
    journal = {Cell},
    author = {Clasquin, M. F. and Melamud, E. and Singer, A. and Gooding, J. R. and Xu, X. and Dong, A. and Cui, H. and Campagna, S. R. and Savchenko, A. and Yakunin, A. F. and Rabinowitz, J. D. and Caudy, A. A.},
    year = {2011},
    pages = {969--980}
    }
  • [DOI] C. N. Deshpande, S. J. Harrop, Y. Boucher, K. A. Hassan, R. D. Leo, X. Xu, H. Cui, A. Savchenko, C. Chang, M. Labbate, I. T. Paulsen, H. W. Stokes, P. M. G. Curmi, and B. C. Mabbutt, “Crystal structure of an integron gene cassette-associated protein from Vibrio cholerae identifies a cationic drug-binding module,” Plos one, vol. 6, iss. 3, 2011.
    [Bibtex]
    @article{deshpande_crystal_2011,
    title = {Crystal structure of an integron gene cassette-associated protein from {Vibrio} cholerae identifies a cationic drug-binding module},
    volume = {6},
    issn = {19326203 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79952301995&doi=10.1371%2fjournal.pone.0016934&partnerID=40&md5=190c36a446ce2fff1b4d0e6808016cf2},
    doi = {10.1371/journal.pone.0016934},
    number = {3},
    journal = {PLoS ONE},
    author = {Deshpande, C. N. and Harrop, S. J. and Boucher, Y. and Hassan, K. A. and Leo, R. D. and Xu, X. and Cui, H. and Savchenko, A. and Chang, C. and Labbate, M. and Paulsen, I. T. and Stokes, H. W. and Curmi, P. M. G. and Mabbutt, B. C.},
    year = {2011}
    }
  • [DOI] S. Di Risio, C. S. Hu, B. A. Saville, D. Liao, and J. Lortie, “Large-scale, high-solids enzymatic hydrolysis of steam-exploded poplar,” Biofuels, bioproducts and biorefining, vol. 5, iss. 6, pp. 609-620, 2011.
    [Bibtex]
    @article{di_risio_large-scale_2011,
    title = {Large-scale, high-solids enzymatic hydrolysis of steam-exploded poplar},
    volume = {5},
    issn = {1932104X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-81255171228&doi=10.1002%2fbbb.323&partnerID=40&md5=8cd569ab81558e69e7f211cc2f7343cb},
    doi = {10.1002/bbb.323},
    number = {6},
    journal = {Biofuels, Bioproducts and Biorefining},
    author = {Di Risio, S. and Hu, C. S. and Saville, B. A. and Liao, D. and Lortie, J.},
    year = {2011},
    pages = {609--620}
    }
  • [DOI] T. Eckert, B. Brunner, E. A. Edwards, and U. G. Wortmann, “Microbially mediated re-oxidation of sulfide during dissimilatory sulfate reduction by Desulfobacter latus,” Geochimica et cosmochimica acta, vol. 75, iss. 12, pp. 3469-3485, 2011.
    [Bibtex]
    @article{eckert_microbially_2011,
    title = {Microbially mediated re-oxidation of sulfide during dissimilatory sulfate reduction by {Desulfobacter} latus},
    volume = {75},
    issn = {00167037 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79955385307&doi=10.1016%2fj.gca.2011.03.034&partnerID=40&md5=63bcb0ef927e996717fa68cf4df2d526},
    doi = {10.1016/j.gca.2011.03.034},
    number = {12},
    journal = {Geochimica et Cosmochimica Acta},
    author = {Eckert, T. and Brunner, B. and Edwards, E. A. and Wortmann, U. G.},
    year = {2011},
    pages = {3469--3485}
    }
  • [DOI] L. A. Edwards, M. Lucas, E. A. Edwards, F. Torrente, R. B. Heuschkel, N. J. Klein, S. H. Murch, M. Bajaj-Elliott, and A. D. Phillips, “Aberrant response to commensal Bacteroides thetaiotaomicron in Crohn’s disease: An ex vivo human organ culture study,” Inflammatory bowel diseases, vol. 17, iss. 5, pp. 1201-1208, 2011.
    [Bibtex]
    @article{edwards_aberrant_2011,
    title = {Aberrant response to commensal {Bacteroides} thetaiotaomicron in {Crohn}'s disease: {An} ex vivo human organ culture study},
    volume = {17},
    issn = {10780998 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79953874298&doi=10.1002%2fibd.21501&partnerID=40&md5=67b33c2c4bd619136749efb0c5d88e75},
    doi = {10.1002/ibd.21501},
    number = {5},
    journal = {Inflammatory Bowel Diseases},
    author = {Edwards, L. A. and Lucas, M. and Edwards, E. A. and Torrente, F. and Heuschkel, R. B. and Klein, N. J. and Murch, S. H. and Bajaj-Elliott, M. and Phillips, A. D.},
    year = {2011},
    pages = {1201--1208}
    }
  • [DOI] A. Eshaghi, S. N. Patel, A. Sarabia, R. R. Higgins, A. Savchenko, P. J. Stojios, Y. Li, N. Bastien, D. C. Alexander, D. E. Low, and J. B. Gubbay, “Multidrug-resistant pandemic (H1n1) 2009 infection in immunocompetent child,” Emerging infectious diseases, vol. 17, iss. 8, pp. 1472-1474, 2011.
    [Bibtex]
    @article{eshaghi_multidrug-resistant_2011,
    title = {Multidrug-resistant pandemic ({H}1N1) 2009 infection in immunocompetent child},
    volume = {17},
    issn = {10806040 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79960886630&doi=10.3201%2feid1708.102004&partnerID=40&md5=87ade5f0fe489510b2954624bc543ef9},
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    [Bibtex]
    @article{fang_direct_2011,
    title = {Direct coupling of a genome-scale microbial in silico model and a groundwater reactive transport model},
    volume = {122},
    issn = {01697722 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79951949741&doi=10.1016%2fj.jconhyd.2010.11.007&partnerID=40&md5=06bc33764db3db81ed566b4d6c007d26},
    doi = {10.1016/j.jconhyd.2010.11.007},
    number = {1-4},
    journal = {Journal of Contaminant Hydrology},
    author = {Fang, Y. and Scheibe, T. D. and Mahadevan, R. and Garg, S. and Long, P. E. and Lovley, D. R.},
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    @article{filippova_crystal_2011,
    title = {Crystal structure of a putative transcriptional regulator {SCO}0520 from {Streptomyces} coelicolor {A}3(2) reveals an unusual dimer among {TetR} family proteins},
    volume = {12},
    issn = {1345711X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80054873723&doi=10.1007%2fs10969-011-9112-4&partnerID=40&md5=035437e9140c97ed9a4611886189b95a},
    doi = {10.1007/s10969-011-9112-4},
    number = {3},
    journal = {Journal of Structural and Functional Genomics},
    author = {Filippova, E. V. and Chruszcz, M. and Cymborowski, M. and Gu, J. and Savchenko, A. and Edwards, A. and Minor, W.},
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    @article{foumani_altered_2011,
    title = {Altered substrate specificity of the gluco-oligosaccharide oxidase from {Acremonium} strictum},
    volume = {108},
    issn = {00063592 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80051784157&doi=10.1002%2fbit.23149&partnerID=40&md5=c4df453ba39d7698064049d1a26e77be},
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    @article{goacher_expanding_2011,
    title = {Expanding the library of secondary ions that distinguish lignin and polysaccharides in time-of-flight secondary ion mass spectrometry analysis of wood},
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    issn = {00032700 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79952164229&doi=10.1021%2fac1023028&partnerID=40&md5=ad7e68dd3fb59ec7875383c7d88aa00a},
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    title = {Effect of calcium on moving-bed biofilm reactor biofilms},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79954520772&doi=10.2175%2f106143010X12780288628255&partnerID=40&md5=a59b2fea686877fa42d8d5d232e41892},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79961082938&doi=10.1128%2fAEM.00063-11&partnerID=40&md5=6442d409e9e163ada695e1439de2c522},
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    @article{li_folic_2011,
    title = {Folic acid stability in the presence of various formulation components including iron compounds in fortified extruded {Ultra} {Rice}® over prolonged storage at 40 °{C} and 60\% relative humidity ({RH})},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78651355629&doi=10.1111%2fj.1365-2621.2010.02494.x&partnerID=40&md5=31568d576615368f41ed696b114fdb89},
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    number = {2},
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    @article{li_folic_2011-1,
    title = {Folic acid fortification through existing fortified foods: {Iodized} salt and vitamin {A}-fortified sugar},
    volume = {32},
    issn = {03795721 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79957844414&partnerID=40&md5=541d9fad222067abf1185bd6a3a772c8},
    number = {1},
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    year = {2011},
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    @article{li_feasibility_2011,
    title = {Feasibility and optimization study of using cold-forming extrusion process for agglomerating and microencapsulating ferrous fumarate for salt double fortification with iodine and iron},
    volume = {28},
    issn = {02652048 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80053426980&doi=10.3109%2f02652048.2011.604434&partnerID=40&md5=2fa1ed4740fa6248fc5cf14f470432cb},
    doi = {10.3109/02652048.2011.604434},
    number = {7},
    journal = {Journal of Microencapsulation},
    author = {Li, Y. O. and Yadava, D. and Lo, K. L. and Diosady, L. L. and Wesley, A. S.},
    year = {2011},
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    @article{liang_pathway-dependent_2011,
    title = {Pathway-dependent isotope fractionation during aerobic and anaerobic degradation of monochlorobenzene and 1,2,4-trichlorobenzene},
    volume = {45},
    issn = {0013936X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80053432042&doi=10.1021%2fes201224x&partnerID=40&md5=9b127558c4cb67e2e8483fce21e39da8},
    doi = {10.1021/es201224x},
    number = {19},
    journal = {Environmental Science and Technology},
    author = {Liang, X. and Howlett, M. R. and Nelson, J. L. and Grant, G. and Dworatzek, S. and Lacrampe-Couloume, G. and Zinder, S. H. and Edwards, E. A. and Sherwood Lollar, B.},
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    @article{macdonald_transcriptomic_2011,
    title = {Transcriptomic responses of the softwood-degrading white-rot fungus {Phanerochaete} carnosa during growth on coniferous and deciduous wood},
    volume = {77},
    issn = {00992240 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79958235330&doi=10.1128%2fAEM.02490-10&partnerID=40&md5=e1d1deb694279597fa251ed2acd0669f},
    doi = {10.1128/AEM.02490-10},
    number = {10},
    journal = {Applied and Environmental Microbiology},
    author = {MacDonald, J. and Doering, M. and Canam, T. and Gong, Y. and Guttman, D. S. and Campbell, M. M. and Master, E. R.},
    year = {2011},
    pages = {3211--3218}
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    @article{mahadevan_erratum:_2011,
    title = {Erratum: {In} situ to in silico and back: {Elucidating} the physiology and ecology of {Geobacter} spp. using genome-scale modelling ({Nature} {Reviews} {Microbiology} (2011) 9 (39-50))},
    volume = {9},
    issn = {17401526 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79951819363&doi=10.1038%2fnrmicro2525&partnerID=40&md5=d6b032ff3233ff9e62bdd61193ac92cb},
    doi = {10.1038/nrmicro2525},
    number = {3},
    journal = {Nature Reviews Microbiology},
    author = {Mahadevan, R. and Palsson, B. Ø and Lovley, D. R.},
    year = {2011},
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    number = {1},
    journal = {Nature Reviews Microbiology},
    author = {Mahadevan, R. and Palsson, B. Ø and Lovley, D. R.},
    year = {2011},
    pages = {39--50}
    }
  • [DOI] K. S. Makarova, D. H. Haft, R. Barrangou, S. J. J. Brouns, E. Charpentier, P. Horvath, S. Moineau, F. J. M. Mojica, Y. I. Wolf, A. F. Yakunin, J. Van Der Oost, and E. V. Koonin, “Evolution and classification of the CRISPR-Cas systems,” Nature reviews microbiology, vol. 9, iss. 6, pp. 467-477, 2011.
    [Bibtex]
    @article{makarova_evolution_2011,
    title = {Evolution and classification of the {CRISPR}-{Cas} systems},
    volume = {9},
    issn = {17401526 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79956157571&doi=10.1038%2fnrmicro2577&partnerID=40&md5=a668e54fcb4847a9d72b5c990a008138},
    doi = {10.1038/nrmicro2577},
    number = {6},
    journal = {Nature Reviews Microbiology},
    author = {Makarova, K. S. and Haft, D. H. and Barrangou, R. and Brouns, S. J. J. and Charpentier, E. and Horvath, P. and Moineau, S. and Mojica, F. J. M. and Wolf, Y. I. and Yakunin, A. F. and Van Der Oost, J. and Koonin, E. V.},
    year = {2011},
    pages = {467--477}
    }
  • [DOI] J. McKechnie, Y. Zhang, A. Ogino, B. Saville, S. Sleep, M. Turner, R. Pontius, and H. L. Maclean, “Impacts of co-location, co-production, and process energy source on life cycle energy use and greenhouse gas emissions of lignocellulosic ethanol,” Biofuels, bioproducts and biorefining, vol. 5, iss. 3, pp. 279-292, 2011.
    [Bibtex]
    @article{mckechnie_impacts_2011,
    title = {Impacts of co-location, co-production, and process energy source on life cycle energy use and greenhouse gas emissions of lignocellulosic ethanol},
    volume = {5},
    issn = {1932104X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79955910361&doi=10.1002%2fbbb.286&partnerID=40&md5=d1b671a333a397cb788e5a5e7d66dbde},
    doi = {10.1002/bbb.286},
    number = {3},
    journal = {Biofuels, Bioproducts and Biorefining},
    author = {McKechnie, J. and Zhang, Y. and Ogino, A. and Saville, B. and Sleep, S. and Turner, M. and Pontius, R. and Maclean, H. L.},
    year = {2011},
    pages = {279--292}
    }
  • [DOI] P. J. McMurdie, L. A. Hug, E. A. Edwards, S. Holmes, and A. M. Spormann, “Site-Specific Mobilization of Vinyl Chloride Respiration Islands by a Mechanism Common in Dehalococcoides,” Bmc genomics, vol. 12, 2011.
    [Bibtex]
    @article{mcmurdie_site-specific_2011,
    title = {Site-{Specific} {Mobilization} of {Vinyl} {Chloride} {Respiration} {Islands} by a {Mechanism} {Common} in {Dehalococcoides}},
    volume = {12},
    issn = {14712164 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79957817494&doi=10.1186%2f1471-2164-12-287&partnerID=40&md5=2c9233d9a4ac0061833a29018c084ed6},
    doi = {10.1186/1471-2164-12-287},
    journal = {BMC Genomics},
    author = {McMurdie, P. J. and Hug, L. A. and Edwards, E. A. and Holmes, S. and Spormann, A. M.},
    year = {2011}
    }
  • [DOI] J. Osipiuk, X. Xu, H. Cui, A. Savchenko, A. Edwards, and A. Joachimiak, “Crystal structure of secretory protein Hcp3 from Pseudomonas aeruginosa,” Journal of structural and functional genomics, vol. 12, iss. 1, pp. 21-26, 2011.
    [Bibtex]
    @article{osipiuk_crystal_2011,
    title = {Crystal structure of secretory protein {Hcp}3 from {Pseudomonas} aeruginosa},
    volume = {12},
    issn = {1345711X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79955808709&doi=10.1007%2fs10969-011-9107-1&partnerID=40&md5=b07900fb40fbb77614c1bf350779b5e5},
    doi = {10.1007/s10969-011-9107-1},
    number = {1},
    journal = {Journal of Structural and Functional Genomics},
    author = {Osipiuk, J. and Xu, X. and Cui, H. and Savchenko, A. and Edwards, A. and Joachimiak, A.},
    year = {2011},
    pages = {21--26}
    }
  • [DOI] A. V. Pandit and R. Mahadevan, “In silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals,” Microbial cell factories, vol. 10, 2011.
    [Bibtex]
    @article{pandit_silico_2011,
    title = {In silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals},
    volume = {10},
    issn = {14752859 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80053445630&doi=10.1186%2f1475-2859-10-76&partnerID=40&md5=740583e7512b83b74445cbb88b860747},
    doi = {10.1186/1475-2859-10-76},
    journal = {Microbial Cell Factories},
    author = {Pandit, A. V. and Mahadevan, R.},
    year = {2011}
    }
  • [DOI] A. C. Paz, S. Javaherian, and A. P. McGuigan, “Tools for micropatterning epithelial cells into microcolonies on transwell filter substrates,” Lab on a chip – miniaturisation for chemistry and biology, vol. 11, iss. 20, pp. 3440-3448, 2011.
    [Bibtex]
    @article{paz_tools_2011,
    title = {Tools for micropatterning epithelial cells into microcolonies on transwell filter substrates},
    volume = {11},
    issn = {14730197 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84855997103&doi=10.1039%2fc1lc20506d&partnerID=40&md5=53b8c88d0f3d61b606c8cd0124769834},
    doi = {10.1039/c1lc20506d},
    number = {20},
    journal = {Lab on a Chip - Miniaturisation for Chemistry and Biology},
    author = {Paz, A. C. and Javaherian, S. and McGuigan, A. P.},
    year = {2011},
    pages = {3440--3448}
    }
  • [DOI] D. Pinel, P. Gawand, R. Mahadevan, and V. J. J. Martin, “‘Omics’ technologies and systems biology for engineering Saccharomyces cerevisiae strains for lignocellulosic bioethanol production,” Biofuels, vol. 2, iss. 6, pp. 659-675, 2011.
    [Bibtex]
    @article{pinel_omics_2011,
    title = {'{Omics}' technologies and systems biology for engineering {Saccharomyces} cerevisiae strains for lignocellulosic bioethanol production},
    volume = {2},
    issn = {17597269 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80455125978&doi=10.4155%2fbfs.11.120&partnerID=40&md5=de890be219a85e962c98a93cc5bbbd2e},
    doi = {10.4155/bfs.11.120},
    number = {6},
    journal = {Biofuels},
    author = {Pinel, D. and Gawand, P. and Mahadevan, R. and Martin, V. J. J.},
    year = {2011},
    pages = {659--675}
    }
  • [DOI] O. Radočaj, E. Dimić, L. L. Diosady, and V. Vujasinović, “Optimizing the texture attributes of a fat-based spread using instrumental measurements,” Journal of texture studies, vol. 42, iss. 5, pp. 394-403, 2011.
    [Bibtex]
    @article{radocaj_optimizing_2011,
    title = {Optimizing the texture attributes of a fat-based spread using instrumental measurements},
    volume = {42},
    issn = {00224901 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80053129148&doi=10.1111%2fj.1745-4603.2011.00300.x&partnerID=40&md5=475fd86c6daa499c477a58c21cc6d809},
    doi = {10.1111/j.1745-4603.2011.00300.x},
    number = {5},
    journal = {Journal of Texture Studies},
    author = {Radočaj, O. and Dimić, E. and Diosady, L. L. and Vujasinović, V.},
    year = {2011},
    pages = {394--403}
    }
  • [DOI] E. S. Rangarajan, K. M. Ruane, A. Proteau, J. D. Schrag, R. Valladares, C. F. Gonzalez, M. Gilbert, A. F. Yakunin, and M. Cygler, “Structural and enzymatic characterization of NanS (YjhS), a 9-O-acetyl N-acetylneuraminic acid esterase from Escherichia coli O157:H7,” Protein science, vol. 20, iss. 7, pp. 1208-1219, 2011.
    [Bibtex]
    @article{rangarajan_structural_2011,
    title = {Structural and enzymatic characterization of {NanS} ({YjhS}), a 9-{O}-acetyl {N}-acetylneuraminic acid esterase from {Escherichia} coli {O}157:{H}7},
    volume = {20},
    issn = {09618368 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79959372165&doi=10.1002%2fpro.649&partnerID=40&md5=5be1cb0a0cd68d42d7d7c532348934ae},
    doi = {10.1002/pro.649},
    number = {7},
    journal = {Protein Science},
    author = {Rangarajan, E. S. and Ruane, K. M. and Proteau, A. and Schrag, J. D. and Valladares, R. and Gonzalez, C. F. and Gilbert, M. and Yakunin, A. F. and Cygler, M.},
    year = {2011},
    pages = {1208--1219}
    }
  • [DOI] D. Romita, Y. L. Cheng, and L. L. Diosady, “Microencapsulation of ferrous fumarate for the production of salt double fortified with iron and iodine,” International journal of food engineering, vol. 7, iss. 3, 2011.
    [Bibtex]
    @article{romita_microencapsulation_2011,
    title = {Microencapsulation of ferrous fumarate for the production of salt double fortified with iron and iodine},
    volume = {7},
    issn = {15563758 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79955693471&doi=10.2202%2f1556-3758.2122&partnerID=40&md5=16b86dd91ad198f5cba858feba8553c4},
    doi = {10.2202/1556-3758.2122},
    number = {3},
    journal = {International Journal of Food Engineering},
    author = {Romita, D. and Cheng, Y. L. and Diosady, L. L.},
    year = {2011}
    }
  • B. A. Saville, “Pretreatment Options,” in Plant Biomass Conversion, John Wiley and Sons, 2011, pp. 199-226.
    [Bibtex]
    @incollection{saville_pretreatment_2011,
    title = {Pretreatment {Options}},
    isbn = {9780813816944 (ISBN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-83055174195&doi=10.1002%2f9780470959138.ch9&partnerID=40&md5=bd77e157e1752c013fd7380a210ba3f0},
    booktitle = {Plant {Biomass} {Conversion}},
    publisher = {John Wiley and Sons},
    author = {Saville, B. A.},
    year = {2011},
    note = {DOI: 10.1002/9780470959138.ch9},
    pages = {199--226}
    }
  • [DOI] T. Shakya, P. J. Stogios, N. Waglechner, E. Evdokimova, L. Ejim, J. E. Blanchard, A. G. McArthur, A. Savchenko, and G. D. Wright, “A small molecule discrimination map of the antibiotic resistance kinome,” Chemistry and biology, vol. 18, iss. 12, pp. 1591-1601, 2011.
    [Bibtex]
    @article{shakya_small_2011,
    title = {A small molecule discrimination map of the antibiotic resistance kinome},
    volume = {18},
    issn = {10745521 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84555196910&doi=10.1016%2fj.chembiol.2011.10.018&partnerID=40&md5=29e3acdfffa9242199cf263ff797046d},
    doi = {10.1016/j.chembiol.2011.10.018},
    number = {12},
    journal = {Chemistry and Biology},
    author = {Shakya, T. and Stogios, P. J. and Waglechner, N. and Evdokimova, E. and Ejim, L. and Blanchard, J. E. and McArthur, A. G. and Savchenko, A. and Wright, G. D.},
    year = {2011},
    pages = {1591--1601}
    }
  • [DOI] P. J. Stogios, T. Shakya, E. Evdokimova, A. Savchenko, and G. D. Wright, “Structure and function of APH(4)-Ia, a hygromycin B resistance enzyme,” Journal of biological chemistry, vol. 286, iss. 3, pp. 1966-1975, 2011.
    [Bibtex]
    @article{stogios_structure_2011,
    title = {Structure and function of {APH}(4)-{Ia}, a hygromycin {B} resistance enzyme},
    volume = {286},
    issn = {00219258 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78751475029&doi=10.1074%2fjbc.M110.194266&partnerID=40&md5=f5c56c0f712283c4ca53c265c4e9bd05},
    doi = {10.1074/jbc.M110.194266},
    number = {3},
    journal = {Journal of Biological Chemistry},
    author = {Stogios, P. J. and Shakya, T. and Evdokimova, E. and Savchenko, A. and Wright, G. D.},
    year = {2011},
    pages = {1966--1975}
    }
  • [DOI] P. J. Stogios, T. Shakya, E. Evdokimova, A. Savchenko, and G. D. Wright, “Structure and function of APH(4)-Ia, a hygromycin B resistance enzyme (Journal of Biological Chemistry (2011) 286, (1966-1975)),” Journal of biological chemistry, vol. 286, iss. 49, p. 42786, 2011.
    [Bibtex]
    @article{stogios_structure_2011-1,
    title = {Structure and function of {APH}(4)-{Ia}, a hygromycin {B} resistance enzyme ({Journal} of {Biological} {Chemistry} (2011) 286, (1966-1975))},
    volume = {286},
    issn = {00219258 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-82755176622&doi=10.1074%2fjbc.A110.194266&partnerID=40&md5=f85a18e8ad19b11d5b9bc44e6e189867},
    doi = {10.1074/jbc.A110.194266},
    number = {49},
    journal = {Journal of Biological Chemistry},
    author = {Stogios, P. J. and Shakya, T. and Evdokimova, E. and Savchenko, A. and Wright, G. D.},
    year = {2011},
    pages = {42786}
    }
  • [DOI] M. A. Syed, S. Koyanagi, E. Sharma, M. C. Jobin, A. F. Yakunin, and C. M. Lévesque, “The chromosomal mazEF locus of Streptococcus mutans encodes a functional type II toxin-antitoxin addiction system,” Journal of bacteriology, vol. 193, iss. 5, pp. 1122-1130, 2011.
    [Bibtex]
    @article{syed_chromosomal_2011,
    title = {The chromosomal {mazEF} locus of {Streptococcus} mutans encodes a functional type {II} toxin-antitoxin addiction system},
    volume = {193},
    issn = {00219193 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79951616353&doi=10.1128%2fJB.01114-10&partnerID=40&md5=69f125a4803320230e95e71e5abf5eef},
    doi = {10.1128/JB.01114-10},
    number = {5},
    journal = {Journal of Bacteriology},
    author = {Syed, M. A. and Koyanagi, S. and Sharma, E. and Jobin, M. C. and Yakunin, A. F. and Lévesque, C. M.},
    year = {2011},
    pages = {1122--1130}
    }
  • [DOI] A. Tchigvintsev, A. U. Singer, R. Flick, P. Petit, G. Brown, E. Evdokimova, A. Savchenko, and A. F. Yakunin, “Structure and activity of the Saccharomyces cerevisiae dUTP pyrophosphatase DUT1, an essential housekeeping enzyme,” Biochemical journal, vol. 437, iss. 2, pp. 243-253, 2011.
    [Bibtex]
    @article{tchigvintsev_structure_2011,
    title = {Structure and activity of the {Saccharomyces} cerevisiae {dUTP} pyrophosphatase {DUT}1, an essential housekeeping enzyme},
    volume = {437},
    issn = {02646021 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79959754068&doi=10.1042%2fBJ20110304&partnerID=40&md5=15b4f0a190974237b9bbff1576b3b7fb},
    doi = {10.1042/BJ20110304},
    number = {2},
    journal = {Biochemical Journal},
    author = {Tchigvintsev, A. and Singer, A. U. and Flick, R. and Petit, P. and Brown, G. and Evdokimova, E. and Savchenko, A. and Yakunin, A. F.},
    year = {2011},
    pages = {243--253}
    }
  • [DOI] J. Usher, V. Balderas-Hernandez, P. Quon, N. D. Gold, V. J. J. Martin, R. Mahadevan, and K. Baetz, “Chemical and synthetic genetic array analysis identifies genes that suppress xylose utilization and fermentation in saccharomyces cerevisiae,” G3: genes, genomes, genetics, vol. 1, iss. 4, pp. 247-258, 2011.
    [Bibtex]
    @article{usher_chemical_2011,
    title = {Chemical and synthetic genetic array analysis identifies genes that suppress xylose utilization and fermentation in saccharomyces cerevisiae},
    volume = {1},
    issn = {21601836 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84873736810&doi=10.1534%2fg3.111.000695&partnerID=40&md5=b862357031e933712324524c851ddf05},
    doi = {10.1534/g3.111.000695},
    number = {4},
    journal = {G3: Genes, Genomes, Genetics},
    author = {Usher, J. and Balderas-Hernandez, V. and Quon, P. and Gold, N. D. and Martin, V. J. J. and Mahadevan, R. and Baetz, K.},
    year = {2011},
    pages = {247--258}
    }
  • T. V. Vuong, D. B. Wilson, and E. Master, “Engineering Thermobifida Fusca cellulases: Catalytic mechanisms and improved activity,” in Protein Engineering: Design, Selection and Applications, Nova Science Publishers, Inc., 2011, pp. 29-51.
    [Bibtex]
    @incollection{vuong_engineering_2011,
    title = {Engineering {Thermobifida} {Fusca} cellulases: {Catalytic} mechanisms and improved activity},
    isbn = {9781616682866 (ISBN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84895232866&partnerID=40&md5=89f45f472518d97e34c4e18c70d4fd6d},
    booktitle = {Protein {Engineering}: {Design}, {Selection} and {Applications}},
    publisher = {Nova Science Publishers, Inc.},
    author = {Vuong, T. V. and Wilson, D. B. and Master, E.},
    year = {2011},
    pages = {29--51}
    }
  • [DOI] L. Yang, W. R. Cluett, and R. Mahadevan, “EMILiO: A fast algorithm for genome-scale strain design,” Metabolic engineering, vol. 13, iss. 3, pp. 272-281, 2011.
    [Bibtex]
    @article{yang_emilio:_2011,
    title = {{EMILiO}: {A} fast algorithm for genome-scale strain design},
    volume = {13},
    issn = {10967176 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79955145774&doi=10.1016%2fj.ymben.2011.03.002&partnerID=40&md5=edf55b533c6474fd3f1d44fb5617d5da},
    doi = {10.1016/j.ymben.2011.03.002},
    number = {3},
    journal = {Metabolic Engineering},
    author = {Yang, L. and Cluett, W. R. and Mahadevan, R.},
    year = {2011},
    pages = {272--281}
    }
  • [DOI] J. Zhao, T. D. Scheibe, and R. Mahadevan, “Model-based analysis of the role of biological, hydrological and geochemical factors affecting uranium bioremediation,” Biotechnology and bioengineering, vol. 108, iss. 7, pp. 1537-1548, 2011.
    [Bibtex]
    @article{zhao_model-based_2011,
    title = {Model-based analysis of the role of biological, hydrological and geochemical factors affecting uranium bioremediation},
    volume = {108},
    issn = {00063592 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79956121413&doi=10.1002%2fbit.23096&partnerID=40&md5=080692afa185213e3deb81cdf8e8ee89},
    doi = {10.1002/bit.23096},
    number = {7},
    journal = {Biotechnology and Bioengineering},
    author = {Zhao, J. and Scheibe, T. D. and Mahadevan, R.},
    year = {2011},
    pages = {1537--1548}
    }
  • [DOI] K. Zhuang, M. Izallalen, P. Mouser, H. Richter, C. Risso, R. Mahadevan, and D. R. Lovley, “Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments,” Isme journal, vol. 5, iss. 2, pp. 305-316, 2011.
    [Bibtex]
    @article{zhuang_genome-scale_2011,
    title = {Genome-scale dynamic modeling of the competition between {Rhodoferax} and {Geobacter} in anoxic subsurface environments},
    volume = {5},
    issn = {17517362 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78751584992&doi=10.1038%2fismej.2010.117&partnerID=40&md5=31388c07abfbf07848ab0880f2f1b95c},
    doi = {10.1038/ismej.2010.117},
    number = {2},
    journal = {ISME Journal},
    author = {Zhuang, K. and Izallalen, M. and Mouser, P. and Richter, H. and Risso, C. and Mahadevan, R. and Lovley, D. R.},
    year = {2011},
    pages = {305--316}
    }
  • [DOI] K. Zhuang, G. N. Vemuri, and R. Mahadevan, “Economics of membrane occupancy and respiro-fermentation,” Molecular systems biology, vol. 7, 2011.
    [Bibtex]
    @article{zhuang_economics_2011,
    title = {Economics of membrane occupancy and respiro-fermentation},
    volume = {7},
    issn = {17444292 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79959610766&doi=10.1038%2fmsb.2011.34&partnerID=40&md5=57649a877772d3656c099fc98e87dbac},
    doi = {10.1038/msb.2011.34},
    journal = {Molecular Systems Biology},
    author = {Zhuang, K. and Vemuri, G. N. and Mahadevan, R.},
    year = {2011}
    }

2010

  • [DOI] M. Ahsanul Islam, E. A. Edwards, and R. Mahadevan, “Characterizing the metabolism of Dehalococcoides with a constraint-based model,” Plos computational biology, vol. 6, iss. 8, 2010.
    [Bibtex]
    @article{ahsanul_islam_characterizing_2010,
    title = {Characterizing the metabolism of {Dehalococcoides} with a constraint-based model},
    volume = {6},
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    @article{becerra_surfactant-like_2010,
    title = {Surfactant-like properties of alkaline extracts from wastewater biosolids},
    volume = {13},
    issn = {10973958 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77955851220&doi=10.1007%2fs11743-009-1164-0&partnerID=40&md5=7cfb2a44445d99400c511671f688ffac},
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    pages = {6983--6991}
    }
  • F. Y. García-Becerra, D. G. Allen, and E. J. Acosta, “Surfactants from Waste Biomass,” in Surfactants from Renewable Resources, John Wiley and Sons, 2010, pp. 167-189.
    [Bibtex]
    @incollection{garcia-becerra_surfactants_2010,
    title = {Surfactants from {Waste} {Biomass}},
    isbn = {9780470760413 (ISBN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84886013443&doi=10.1002%2f9780470686607.ch9&partnerID=40&md5=ee998a0a968ffaabad0861b7a7c4992a},
    booktitle = {Surfactants from {Renewable} {Resources}},
    publisher = {John Wiley and Sons},
    author = {García-Becerra, F. Y. and Allen, D. G. and Acosta, E. J.},
    year = {2010},
    note = {DOI: 10.1002/9780470686607.ch9},
    pages = {167--189}
    }
  • [DOI] S. Garg, L. Yang, and R. Mahadevan, “Thermodynamic analysis of regulation in metabolic networks using constraint-based modeling,” Bmc research notes, vol. 3, 2010.
    [Bibtex]
    @article{garg_thermodynamic_2010,
    title = {Thermodynamic analysis of regulation in metabolic networks using constraint-based modeling},
    volume = {3},
    issn = {17560500 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77952573312&doi=10.1186%2f1756-0500-3-125&partnerID=40&md5=6245405dee36b1de1cab875f11ea1f31},
    doi = {10.1186/1756-0500-3-125},
    journal = {BMC Research Notes},
    author = {Garg, S. and Yang, L. and Mahadevan, R.},
    year = {2010}
    }
  • [DOI] A. C. Hayes, S. N. Liss, and D. G. Allen, “Growth kinetics of Hyphomicrobium and Thiobacillus spp. in mixed cultures degrading dimethyl sulfide and methanol,” Applied and environmental microbiology, vol. 76, iss. 16, pp. 5423-5431, 2010.
    [Bibtex]
    @article{hayes_growth_2010,
    title = {Growth kinetics of {Hyphomicrobium} and {Thiobacillus} spp. in mixed cultures degrading dimethyl sulfide and methanol},
    volume = {76},
    issn = {00992240 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77955940766&doi=10.1128%2fAEM.00076-10&partnerID=40&md5=2ea39bf240ee601ee5d300e8c789c8c2},
    doi = {10.1128/AEM.00076-10 10.1099/ijs.0.013425-0; Zeyer, J., Eicher, P., Wakeham, S.G., Schwarzenbach, R.P., Oxidation of dimethyl sulfide to dimethyl sulfoxide by phototrophic purple bacteria (1987) Appl. Environ. Microbiol., 53, pp. 2026-2032; Zhang, L., Hirai, M., Shoda, M., Removal characteristics of dimethyl sulfide, methanethiol and hydrogen sulfide by Hyphomicrobium sp. 155 isolated from peat biofilter (1991) J. Ferment. Bioeng., 73, pp. 392-396; Zhang, L., Kuniyoshi, I., Hirai, M., Shoda, M., Oxidation of dimethyl sulfide by Pseudomonas acidovorans DMR-11 isolated from peat biofilter (1991) Biotechnol. Lett., 13, pp. 223-228; Zhang, Y., Liss, S.N., Allen, D.G., The effects of methanol on the biofiltration of dimethyl sulfide in inorganic biofilters (2006) Biotechnol. Bioeng., 95, pp. 734-743; Zhang, Y., Liss, S.N., Allen, D.G., Effect of methanol on pH and stability of inorganic biofilters treating dimethyl sulfide (2007) Environ. Sci. Technol., 41, pp. 3752-3757; Zhang, Y., Liss, S.N., Allen, D.G., Enhancing and modeling the biofiltration of dimethyl sulfide under dynamic methanol addition (2007) Chem. Eng. Sci., 62, pp. 2474-2481; Zhang, Y., Liss, S.N., Allen, D.G., Modeling the biofiltration of dimethyl sulfide in the presence of methanol in inorganic biofilters at steady state (2008) Biotechnol. Prog., 24, pp. 845-851},
    number = {16},
    journal = {Applied and Environmental Microbiology},
    author = {Hayes, A. C. and Liss, S. N. and Allen, D. G.},
    year = {2010},
    pages = {5423--5431}
    }
  • [DOI] A. C. Hayes, Y. Zhang, S. N. Liss, and D. G. Allen, “Linking performance to microbiology in biofilters treating dimethyl sulphide in the presence and absence of methanol,” Applied microbiology and biotechnology, vol. 85, iss. 4, pp. 1151-1166, 2010.
    [Bibtex]
    @article{hayes_linking_2010,
    title = {Linking performance to microbiology in biofilters treating dimethyl sulphide in the presence and absence of methanol},
    volume = {85},
    issn = {01757598 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-76649113390&doi=10.1007%2fs00253-009-2272-5&partnerID=40&md5=011de2e04d93678f762b147fcab93a18},
    doi = {10.1007/s00253-009-2272-5},
    number = {4},
    journal = {Applied Microbiology and Biotechnology},
    author = {Hayes, A. C. and Zhang, Y. and Liss, S. N. and Allen, D. G.},
    year = {2010},
    pages = {1151--1166}
    }
  • [DOI] S. E. Hulme, S. S. Shevkoplyas, A. P. McGuigan, J. Apfeld, W. Fontana, and G. M. Whitesides, “Lifespan-on-a-chip: Microfluidic chambers for performing lifelong observation of C. elegans,” Lab on a chip – miniaturisation for chemistry and biology, vol. 10, iss. 5, pp. 589-597, 2010.
    [Bibtex]
    @article{hulme_lifespan---chip:_2010,
    title = {Lifespan-on-a-chip: {Microfluidic} chambers for performing lifelong observation of {C}. elegans},
    volume = {10},
    issn = {14730197 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-76949108196&doi=10.1039%2fb919265d&partnerID=40&md5=c87259b2bc4250017b19cc12f7ee537e},
    doi = {10.1039/b919265d},
    number = {5},
    journal = {Lab on a Chip - Miniaturisation for Chemistry and Biology},
    author = {Hulme, S. E. and Shevkoplyas, S. S. and McGuigan, A. P. and Apfeld, J. and Fontana, W. and Whitesides, G. M.},
    year = {2010},
    pages = {589--597}
    }
  • [DOI] E. Kuznetsova, L. Xu, A. Singer, G. Brown, A. Dong, R. Flick, H. Cui, M. Cuff, A. Joachimiak, A. Savchenko, and A. F. Yakunin, “Structure and activity of the metal-independent fructose-1,6-bisphosphatase YK23 from Saccharomyces cerevisiae,” Journal of biological chemistry, vol. 285, iss. 27, pp. 21049-21059, 2010.
    [Bibtex]
    @article{kuznetsova_structure_2010,
    title = {Structure and activity of the metal-independent fructose-1,6-bisphosphatase {YK}23 from {Saccharomyces} cerevisiae},
    volume = {285},
    issn = {00219258 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77954238894&doi=10.1074%2fjbc.M110.118315&partnerID=40&md5=204dc55aa7da2bc47312592ec26970a4},
    doi = {10.1074/jbc.M110.118315},
    number = {27},
    journal = {Journal of Biological Chemistry},
    author = {Kuznetsova, E. and Xu, L. and Singer, A. and Brown, G. and Dong, A. and Flick, R. and Cui, H. and Cuff, M. and Joachimiak, A. and Savchenko, A. and Yakunin, A. F.},
    year = {2010},
    pages = {21049--21059}
    }
  • [DOI] Y. O. Li, L. L. Diosady, and A. S. Wesley, “Iodine stability in iodized salt dual fortified with microencapsulated ferrous fumarate made by an extrusion-based encapsulation process,” Journal of food engineering, vol. 99, iss. 2, pp. 232-238, 2010.
    [Bibtex]
    @article{li_iodine_2010,
    title = {Iodine stability in iodized salt dual fortified with microencapsulated ferrous fumarate made by an extrusion-based encapsulation process},
    volume = {99},
    issn = {02608774 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77950057239&doi=10.1016%2fj.jfoodeng.2010.03.007&partnerID=40&md5=caaff1f3c6e8aa46d6c3f8d90fcec266},
    doi = {10.1016/j.jfoodeng.2010.03.007},
    number = {2},
    journal = {Journal of Food Engineering},
    author = {Li, Y. O. and Diosady, L. L. and Wesley, A. S.},
    year = {2010},
    pages = {232--238}
    }
  • [DOI] B. S. Lollar, S. Hirschorn, S. O. C. Mundle, A. Grostern, E. A. Edwards, and G. Lacrampe-Couloume, “Insights into enzyme kinetics of chloroethane biodegradation using compound specific stable isotopes,” Environmental science and technology, vol. 44, iss. 19, pp. 7498-7503, 2010.
    [Bibtex]
    @article{lollar_insights_2010,
    title = {Insights into enzyme kinetics of chloroethane biodegradation using compound specific stable isotopes},
    volume = {44},
    issn = {0013936X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77957363928&doi=10.1021%2fes101330r&partnerID=40&md5=48e3718228de558b93d3c3600b7edfe4},
    doi = {10.1021/es101330r},
    number = {19},
    journal = {Environmental Science and Technology},
    author = {Lollar, B. S. and Hirschorn, S. and Mundle, S. O. C. and Grostern, A. and Edwards, E. A. and Lacrampe-Couloume, G.},
    year = {2010},
    pages = {7498--7503}
    }
  • [DOI] E. Lorenzini, A. Singer, B. Singh, R. Lam, T. Skarina, N. Y. Chirgadze, A. Savchenko, and R. S. Gupta, “Structure and protein-protein interaction studies on Chlamydia trachomatis protein CT670 (YscO homolog),” Journal of bacteriology, vol. 192, iss. 11, pp. 2746-2756, 2010.
    [Bibtex]
    @article{lorenzini_structure_2010,
    title = {Structure and protein-protein interaction studies on {Chlamydia} trachomatis protein {CT}670 ({YscO} homolog)},
    volume = {192},
    issn = {00219193 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77952560704&doi=10.1128%2fJB.01479-09&partnerID=40&md5=f1099b69465e661c89132e7c6bbcd900},
    doi = {10.1128/JB.01479-09},
    number = {11},
    journal = {Journal of Bacteriology},
    author = {Lorenzini, E. and Singer, A. and Singh, B. and Lam, R. and Skarina, T. and Chirgadze, N. Y. and Savchenko, A. and Gupta, R. S.},
    year = {2010},
    pages = {2746--2756}
    }
  • [DOI] H. B. Luo, H. Zheng, M. D. Zimmerman, M. Chruszcz, T. Skarina, O. Egorova, A. Savchenko, A. M. Edwards, and W. Minor, “Crystal structure and molecular modeling study of N-carbamoylsarcosine amidase Ta0454 from Thermoplasma acidophilum,” Journal of structural biology, vol. 169, iss. 3, pp. 304-311, 2010.
    [Bibtex]
    @article{luo_crystal_2010,
    title = {Crystal structure and molecular modeling study of {N}-carbamoylsarcosine amidase {Ta}0454 from {Thermoplasma} acidophilum},
    volume = {169},
    issn = {10478477 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-76749108007&doi=10.1016%2fj.jsb.2009.11.008&partnerID=40&md5=d2cb1d78a8341f844595753d27d83d1c},
    doi = {10.1016/j.jsb.2009.11.008},
    number = {3},
    journal = {Journal of Structural Biology},
    author = {Luo, H. B. and Zheng, H. and Zimmerman, M. D. and Chruszcz, M. and Skarina, T. and Egorova, O. and Savchenko, A. and Edwards, A. M. and Minor, W.},
    year = {2010},
    pages = {304--311}
    }
  • [DOI] S. Mahajan and E. R. Master, “Proteomic characterization of lignocellulose-degrading enzymes secreted by Phanerochaete carnosa grown on spruce and microcrystalline cellulose,” Applied microbiology and biotechnology, vol. 86, iss. 6, pp. 1903-1914, 2010.
    [Bibtex]
    @article{mahajan_proteomic_2010,
    title = {Proteomic characterization of lignocellulose-degrading enzymes secreted by {Phanerochaete} carnosa grown on spruce and microcrystalline cellulose},
    volume = {86},
    issn = {01757598 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77952882025&doi=10.1007%2fs00253-010-2516-4&partnerID=40&md5=d8defb9cb6f9bda10d117e53b018d570},
    doi = {10.1007/s00253-010-2516-4},
    number = {6},
    journal = {Applied Microbiology and Biotechnology},
    author = {Mahajan, S. and Master, E. R.},
    year = {2010},
    pages = {1903--1914}
    }
  • [DOI] N. Nadarajah, D. G. Allen, and R. R. Fulthorpe, “Composition of activated sludge settling and planktonic bacterial communities treating industrial effluent and their correlation to settling problems,” Applied microbiology and biotechnology, vol. 88, iss. 5, pp. 1205-1214, 2010.
    [Bibtex]
    @article{nadarajah_composition_2010,
    title = {Composition of activated sludge settling and planktonic bacterial communities treating industrial effluent and their correlation to settling problems},
    volume = {88},
    issn = {01757598 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78149407012&doi=10.1007%2fs00253-010-2829-3&partnerID=40&md5=e30575b8dda8ad77e220430010eaf9e4},
    doi = {10.1007/s00253-010-2829-3},
    number = {5},
    journal = {Applied Microbiology and Biotechnology},
    author = {Nadarajah, N. and Allen, D. G. and Fulthorpe, R. R.},
    year = {2010},
    pages = {1205--1214}
    }
  • [DOI] A. B. Namazi, C. Q. Jia, and D. G. Allen, “Production and characterization of lignocellulosic biomass-derived activated carbon,” Water science and technology, vol. 62, iss. 11, pp. 2637-2646, 2010.
    [Bibtex]
    @article{namazi_production_2010,
    title = {Production and characterization of lignocellulosic biomass-derived activated carbon},
    volume = {62},
    issn = {02731223 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78751540850&doi=10.2166%2fwst.2010.981&partnerID=40&md5=eb14a3971cb71a8b03067943363b1983},
    doi = {10.2166/wst.2010.981},
    number = {11},
    journal = {Water Science and Technology},
    author = {Namazi, A. B. and Jia, C. Q. and Allen, D. G.},
    year = {2010},
    pages = {2637--2646}
    }
  • [DOI] W. W. Navarre, S. B. Zou, H. Roy, J. L. Xie, A. Savchenko, A. Singer, E. Edvokimova, L. R. Prost, R. Kumar, M. Ibba, and F. C. Fang, “PoxA, YjeK, and elongation factor P coordinately modulate virulence and drug resistance in Salmonella enterica,” Molecular cell, vol. 39, iss. 2, pp. 209-221, 2010.
    [Bibtex]
    @article{navarre_poxa_2010,
    title = {{PoxA}, {YjeK}, and elongation factor {P} coordinately modulate virulence and drug resistance in {Salmonella} enterica},
    volume = {39},
    issn = {10972765 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77955474903&doi=10.1016%2fj.molcel.2010.06.021&partnerID=40&md5=aa6af6c34becf4b90dc144b20ced9392},
    doi = {10.1016/j.molcel.2010.06.021},
    number = {2},
    journal = {Molecular Cell},
    author = {Navarre, W. W. and Zou, S. B. and Roy, H. and Xie, J. L. and Savchenko, A. and Singer, A. and Edvokimova, E. and Prost, L. R. and Kumar, R. and Ibba, M. and Fang, F. C.},
    year = {2010},
    pages = {209--221}
    }
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    [Bibtex]
    @article{salimi_genome-scale_2010,
    title = {Genome-scale metabolic modeling of a clostridial co-culture for consolidated bioprocessing},
    volume = {5},
    issn = {18606768 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77954724818&doi=10.1002%2fbiot.201000159&partnerID=40&md5=9a45c88f0becfae76e331dc4449380b7},
    doi = {10.1002/biot.201000159},
    number = {7},
    journal = {Biotechnology Journal},
    author = {Salimi, F. and Zhuang, K. and Mahadevan, R.},
    year = {2010},
    pages = {726--738}
    }
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    [Bibtex]
    @article{she_mass_2010,
    title = {Mass spectrometry following mild enzymatic digestion reveals phosphorylation of recombinant proteins in escherichia coli through mechanisms involving direct nucleotide binding},
    volume = {9},
    issn = {15353893 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77954578660&doi=10.1021%2fpr9011987&partnerID=40&md5=f08949e9e7a5a37860fe3f637cbf567f},
    doi = {10.1021/pr9011987},
    number = {6},
    journal = {Journal of Proteome Research},
    author = {She, Y. M. and Xu, X. and Yakunin, A. F. and Dhe-Paganon, S. and Donald, L. J. and Standing, K. G. and Lee, D. C. and Jia, Z. and Cyr, T. D.},
    year = {2010},
    pages = {3311--3318}
    }
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    @article{srinivasan_characterization_2010,
    title = {Characterization of proton production and consumption associated with microbial metabolism},
    volume = {10},
    issn = {14726750 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77649161191&doi=10.1186%2f1472-6750-10-2&partnerID=40&md5=3f9e7d05709d31261331aa9ea8947724},
    doi = {10.1186/1472-6750-10-2 10.1186/1752-0509-1183-1115; Larsson, G., Enfors, S.O., Pham, H., The pH-Auxostat as a Tool for Studying Microbial Dynamics in Continuous Fermentation (1990) Biotechnology and Bioengineering, 36 (3), pp. 224-232. , 10.1002/bit.260360303, 18595072; Ishizaki, A., Tripetchkul, S., Tonokawa, M., Shi, Z.P., Shimizu, K., PH-mediated control methods for continuous ethanol fermentation using Zymomonas mobilis (1994) Journal of Fermentation and Bioengineering, 77 (5), pp. 541-547},
    journal = {BMC Biotechnology},
    author = {Srinivasan, K. and Mahadevan, R.},
    year = {2010}
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    [Bibtex]
    @article{tchigvintsev_structural_2010,
    title = {Structural insight into the mechanism of c-di-{GMP} hydrolysis by {EAL} domain phosphodiesterases},
    volume = {402},
    issn = {00222836 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77956921553&doi=10.1016%2fj.jmb.2010.07.050&partnerID=40&md5=061d991a531818a2f5d55f05aa00767e},
    doi = {10.1016/j.jmb.2010.07.050},
    number = {3},
    journal = {Journal of Molecular Biology},
    author = {Tchigvintsev, A. and Xu, X. and Singer, A. and Chang, C. and Brown, G. and Proudfoot, M. and Cui, H. and Flick, R. and Anderson, W. F. and Joachimiak, A. and Galperin, M. Y. and Savchenko, A. and Yakunin, A. F.},
    year = {2010},
    pages = {524--538}
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    [Bibtex]
    @article{wang_mining_2010,
    title = {Mining bacterial genomes for novel arylesterase activity},
    volume = {3},
    issn = {17517907 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78349257826&doi=10.1111%2fj.1751-7915.2010.00185.x&partnerID=40&md5=2cd45b41934d1b03fa84a2fa79406308},
    doi = {10.1111/j.1751-7915.2010.00185.x},
    number = {6},
    journal = {Microbial Biotechnology},
    author = {Wang, L. and Mavisakalyan, V. and Tillier, E. R. M. and Clark, G. W. and Savchenko, A. V. and Yakunin, A. F. and Master, E. R.},
    year = {2010},
    pages = {677--690}
    }
  • N. Wood, H. Tran, and E. Master, “Improving anaerobic conversion of pulp mill secondary sludge to biogas by pretreatment,” Tappi journal, vol. 9, iss. 6, pp. 16-21, 2010.
    [Bibtex]
    @article{wood_improving_2010,
    title = {Improving anaerobic conversion of pulp mill secondary sludge to biogas by pretreatment},
    volume = {9},
    issn = {07341415 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78650119381&partnerID=40&md5=2a2357d960efbc230e4dd606b70fd683},
    number = {6},
    journal = {Tappi Journal},
    author = {Wood, N. and Tran, H. and Master, E.},
    year = {2010},
    pages = {16--21}
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    @article{wu_nleg_2010,
    title = {{NleG} type 3 effectors from enterohaemorrhagic {Escherichia} coli are {U}-{Box} {E}3 ubiquitin ligases},
    volume = {6},
    issn = {15537366 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77954670354&doi=10.1371%2fjournal.ppat.1000960&partnerID=40&md5=3d5b8ef9cea42e5fd0d1bb20cdd28ff2},
    doi = {10.1371/journal.ppat.1000960},
    number = {6},
    journal = {PLoS Pathogens},
    author = {Wu, B. and Skarina, T. and Yee, A. and Jobin, M. C. and Dileo, R. and Semesi, A. and Fares, C. and Lemak, A. and Coombes, B. K. and Arrowsmith, C. H. and Singer, A. U. and Savchenko, A.},
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    [Bibtex]
    @article{yang_anaerobic_2010,
    title = {Anaerobic treatability and biogas production potential of selected in-mill streams},
    volume = {62},
    issn = {02731223 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79951595176&doi=10.2166%2fwst.2010.980&partnerID=40&md5=73c936dfa5ac19b4fda8bc4465cdf781},
    doi = {10.2166/wst.2010.980},
    number = {10},
    journal = {Water Science and Technology},
    author = {Yang, M. I. and Edwards, E. A. and Allen, D. G.},
    year = {2010},
    pages = {2427--2434}
    }
  • [DOI] Z. Yu, S. E. Reichheld, A. Savchenko, J. Parkinson, and A. R. Davidson, “A comprehensive analysis of structural and sequence conservation in the TetR family transcriptional regulators,” Journal of molecular biology, vol. 400, iss. 4, pp. 847-864, 2010.
    [Bibtex]
    @article{yu_comprehensive_2010,
    title = {A comprehensive analysis of structural and sequence conservation in the {TetR} family transcriptional regulators},
    volume = {400},
    issn = {00222836 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-77954384737&doi=10.1016%2fj.jmb.2010.05.062&partnerID=40&md5=7f2129eca9d006c6436c7c9aa7a748b2},
    doi = {10.1016/j.jmb.2010.05.062},
    number = {4},
    journal = {Journal of Molecular Biology},
    author = {Yu, Z. and Reichheld, S. E. and Savchenko, A. and Parkinson, J. and Davidson, A. R.},
    year = {2010},
    pages = {847--864}
    }
  • [DOI] J. Zhao, Y. Fang, T. D. Scheibe, D. R. Lovley, and R. Mahadevan, “Modeling and sensitivity analysis of electron capacitance for Geobacter in sedimentary environments,” Journal of contaminant hydrology, vol. 112, iss. 1-4, pp. 30-44, 2010.
    [Bibtex]
    @article{zhao_modeling_2010,
    title = {Modeling and sensitivity analysis of electron capacitance for {Geobacter} in sedimentary environments},
    volume = {112},
    issn = {01697722 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-76049103018&doi=10.1016%2fj.jconhyd.2009.10.002&partnerID=40&md5=84a0897b20c6e66baaa0333ed18d29e6},
    doi = {10.1016/j.jconhyd.2009.10.002},
    number = {1-4},
    journal = {Journal of Contaminant Hydrology},
    author = {Zhao, J. and Fang, Y. and Scheibe, T. D. and Lovley, D. R. and Mahadevan, R.},
    year = {2010},
    pages = {30--44}
    }

2009

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    number = {10},
    journal = {Canadian Journal of Microbiology},
    author = {Bester, E. and Edwards, E. A. and Wolfaardt, G. M.},
    year = {2009},
    pages = {1195--1206}
    }
  • [DOI] G. Brown, A. Singer, V. V. Lunin, M. Produfoot, T. Skarina, R. Flick, S. Kochinyan, R. Sanishvili, A. Joachimiak, A. M. Edwards, A. Savchenko, and A. F. Yakunin, “Structural and biochemical characterization of the type II fructose-1,6-bisphosphatase GlpX from Escherichia coli,” Journal of biological chemistry, vol. 284, iss. 6, pp. 3784-3792, 2009.
    [Bibtex]
    @article{brown_structural_2009,
    title = {Structural and biochemical characterization of the type {II} fructose-1,6-bisphosphatase {GlpX} from {Escherichia} coli},
    volume = {284},
    issn = {00219258 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-63649125816&doi=10.1074%2fjbc.M808186200&partnerID=40&md5=fe6822d664ca8fe4160d839e6ca19f5b},
    doi = {10.1074/jbc.M808186200},
    number = {6},
    journal = {Journal of Biological Chemistry},
    author = {Brown, G. and Singer, A. and Lunin, V. V. and Produfoot, M. and Skarina, T. and Flick, R. and Kochinyan, S. and Sanishvili, R. and Joachimiak, A. and Edwards, A. M. and Savchenko, A. and Yakunin, A. F.},
    year = {2009},
    pages = {3784--3792}
    }
  • [DOI] M. A. Currie, F. Merino, T. Skarina, A. H. Y. Wong, A. Singer, G. Brown, A. Savchenko, A. Caniuguir, V. Guixé, A. F. Yakunin, and Z. Jia, “ADP-dependent 6-phosphofructokinase from pyrococcus horikoshii OT3. Structure determination and biochemical characterization of PH1645,” Journal of biological chemistry, vol. 284, iss. 34, pp. 22664-22671, 2009.
    [Bibtex]
    @article{currie_adp-dependent_2009,
    title = {{ADP}-dependent 6-phosphofructokinase from pyrococcus horikoshii {OT}3. {Structure} determination and biochemical characterization of {PH}1645},
    volume = {284},
    issn = {00219258 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-69249085734&doi=10.1074%2fjbc.M109.012401&partnerID=40&md5=53f45ecc8fa55ee8e4f0885d9cb6c9cc},
    doi = {10.1074/jbc.M109.012401},
    number = {34},
    journal = {Journal of Biological Chemistry},
    author = {Currie, M. A. and Merino, F. and Skarina, T. and Wong, A. H. Y. and Singer, A. and Brown, G. and Savchenko, A. and Caniuguir, A. and Guixé, V. and Yakunin, A. F. and Jia, Z.},
    year = {2009},
    pages = {22664--22671}
    }
  • [DOI] A. Grostern, W. W. M. Chan, and E. A. Edwards, “1,1,1-Trichloroethane and 1,1-dichloroethane reductive dechlorination kinetics and co-contaminant effects in a Dehalobacter-containing mixed culture,” Environmental science and technology, vol. 43, iss. 17, pp. 6799-6807, 2009.
    [Bibtex]
    @article{grostern_111-trichloroethane_2009,
    title = {1,1,1-{Trichloroethane} and 1,1-dichloroethane reductive dechlorination kinetics and co-contaminant effects in a {Dehalobacter}-containing mixed culture},
    volume = {43},
    issn = {0013936X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-69549090550&doi=10.1021%2fes901038x&partnerID=40&md5=bd8ab1a09287255c1bf025268b39d6a4},
    doi = {10.1021/es901038x},
    number = {17},
    journal = {Environmental Science and Technology},
    author = {Grostern, A. and Chan, W. W. M. and Edwards, E. A.},
    year = {2009},
    pages = {6799--6807}
    }
  • [DOI] A. Grostern and E. A. Edwards, “Characterization of a Dehalobacter coculture that dechlorinates 1,2-dichloroethane to ethene and identification of the putative reductive dehalogenase gene,” Applied and environmental microbiology, vol. 75, iss. 9, pp. 2684-2693, 2009.
    [Bibtex]
    @article{grostern_characterization_2009,
    title = {Characterization of a {Dehalobacter} coculture that dechlorinates 1,2-dichloroethane to ethene and identification of the putative reductive dehalogenase gene},
    volume = {75},
    issn = {00992240 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-65549166732&doi=10.1128%2fAEM.02037-08&partnerID=40&md5=89081e1ec45f988ce970220de5898ce8},
    doi = {10.1128/AEM.02037-08},
    number = {9},
    journal = {Applied and Environmental Microbiology},
    author = {Grostern, A. and Edwards, E. A.},
    year = {2009},
    pages = {2684--2693}
    }
  • [DOI] Y. Kang, V. V. Lunin, T. Skarina, A. Savchenko, M. J. Schurr, and T. T. Hoang, “The long-chain fatty acid sensor, PsrA, modulates the expression of rpoS and the type III secretion exsCEBA operon in Pseudomonas aeruginosa,” Molecular microbiology, vol. 73, iss. 1, pp. 120-136, 2009.
    [Bibtex]
    @article{kang_long-chain_2009,
    title = {The long-chain fatty acid sensor, {PsrA}, modulates the expression of {rpoS} and the type {III} secretion {exsCEBA} operon in {Pseudomonas} aeruginosa},
    volume = {73},
    issn = {0950382X (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-67649452128&doi=10.1111%2fj.1365-2958.2009.06757.x&partnerID=40&md5=e1495b8838db636ec96ae4464e78a1e0},
    doi = {10.1111/j.1365-2958.2009.06757.x},
    number = {1},
    journal = {Molecular Microbiology},
    author = {Kang, Y. and Lunin, V. V. and Skarina, T. and Savchenko, A. and Schurr, M. J. and Hoang, T. T.},
    year = {2009},
    pages = {120--136}
    }
  • Y. O. Li, L. L. Diosady, and A. S. Wesley, “Iron in vitro bioavailability and iodine storage stability in double-fortified salt,” Food and nutrition bulletin, vol. 30, iss. 4, pp. 327-335, 2009.
    [Bibtex]
    @article{li_iron_2009,
    title = {Iron in vitro bioavailability and iodine storage stability in double-fortified salt},
    volume = {30},
    issn = {03795721 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-76149105162&partnerID=40&md5=df0f4f15fff804892ddae07c7372938c},
    number = {4},
    journal = {Food and Nutrition Bulletin},
    author = {Li, Y. O. and Diosady, L. L. and Wesley, A. S.},
    year = {2009},
    pages = {327--335}
    }
  • Y. O. Li, J. Lam, L. L. Diosady, and S. Jankowski, “Antioxidant system for the preservation of vitamin A in ultra rice,” Food and nutrition bulletin, vol. 30, iss. 1, pp. 82-89, 2009.
    [Bibtex]
    @article{li_antioxidant_2009,
    title = {Antioxidant system for the preservation of vitamin {A} in ultra rice},
    volume = {30},
    issn = {03795721 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-65349193503&partnerID=40&md5=d20005f27bc533aebd1ee67a315b6d4d},
    number = {1},
    journal = {Food and Nutrition Bulletin},
    author = {Li, Y. O. and Lam, J. and Diosady, L. L. and Jankowski, S.},
    year = {2009},
    pages = {82--89}
    }
  • [DOI] D. Martinez, J. Challacombe, I. Morgenstern, D. Hibbett, M. Schmoll, C. P. Kubicek, P. Ferreira, F. J. Ruiz-Duenas, A. T. Martinez, P. Kersten, K. E. Hammel, A. Vanden Wymelenberg, J. Gaskell, E. Lindquist, G. Sabat, S. S. BonDurant, L. F. Larrondo, P. Canessa, R. Vicuna, J. Yadav, H. Doddapaneni, V. Subramanian, A. G. Pisabarro, J. L. Lavín, J. A. Oguiza, E. Master, B. Henrissat, P. M. Coutinho, P. Harris, J. K. Magnuson, S. E. Baker, K. Bruno, W. Kenealy, P. J. Hoegger, U. Kües, P. Ramaiya, S. Lucas, A. Salamov, H. Shapiro, H. Tu, C. L. Chee, M. Misra, G. Xie, S. Teter, D. Yaver, T. James, M. Mokrejs, M. Pospisek, I. V. Grigoriev, T. Brettin, D. Rokhsar, R. Berka, and D. Cullen, “Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion,” Proceedings of the national academy of sciences of the united states of america, vol. 106, iss. 6, pp. 1954-1959, 2009.
    [Bibtex]
    @article{martinez_genome_2009,
    title = {Genome, transcriptome, and secretome analysis of wood decay fungus {Postia} placenta supports unique mechanisms of lignocellulose conversion},
    volume = {106},
    issn = {00278424 (ISSN)},
    doi = {10.1073/pnas.0809575106},
    number = {6},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    author = {Martinez, D. and Challacombe, J. and Morgenstern, I. and Hibbett, D. and Schmoll, M. and Kubicek, C. P. and Ferreira, P. and Ruiz-Duenas, F. J. and Martinez, A. T. and Kersten, P. and Hammel, K. E. and Vanden Wymelenberg, A. and Gaskell, J. and Lindquist, E. and Sabat, G. and BonDurant, S. S. and Larrondo, L. F. and Canessa, P. and Vicuna, R. and Yadav, J. and Doddapaneni, H. and Subramanian, V. and Pisabarro, A. G. and Lavín, J. L. and Oguiza, J. A. and Master, E. and Henrissat, B. and Coutinho, P. M. and Harris, P. and Magnuson, J. K. and Baker, S. E. and Bruno, K. and Kenealy, W. and Hoegger, P. J. and Kües, U. and Ramaiya, P. and Lucas, S. and Salamov, A. and Shapiro, H. and Tu, H. and Chee, C. L. and Misra, M. and Xie, G. and Teter, S. and Yaver, D. and James, T. and Mokrejs, M. and Pospisek, M. and Grigoriev, I. V. and Brettin, T. and Rokhsar, D. and Berka, R. and Cullen, D.},
    year = {2009},
    pages = {1954--1959}
    }
  • [DOI] P. L. Morrill, B. E. Sleep, D. J. Seepersad, M. L. McMaster, E. D. Hood, C. LeBron, D. W. Major, E. A. Edwards, and B. Sherwood Lollar, “Variations in expression of carbon isotope fractionation of chlorinated ethenes during biologically enhanced PCE dissolution close to a source zone,” Journal of contaminant hydrology, vol. 110, iss. 1-2, pp. 60-71, 2009.
    [Bibtex]
    @article{morrill_variations_2009,
    title = {Variations in expression of carbon isotope fractionation of chlorinated ethenes during biologically enhanced {PCE} dissolution close to a source zone},
    volume = {110},
    issn = {01697722 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-70449399248&doi=10.1016%2fj.jconhyd.2009.08.006&partnerID=40&md5=ecfde3b11cabc854a80af888366b5fe4},
    doi = {10.1016/j.jconhyd.2009.08.006},
    number = {1-2},
    journal = {Journal of Contaminant Hydrology},
    author = {Morrill, P. L. and Sleep, B. E. and Seepersad, D. J. and McMaster, M. L. and Hood, E. D. and LeBron, C. and Major, D. W. and Edwards, E. A. and Sherwood Lollar, B.},
    year = {2009},
    pages = {60--71}
    }
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    [Bibtex]
    @article{najafian_aqueous_2009,
    title = {Aqueous extraction of virgin olive oil using industrial enzymes},
    volume = {42},
    issn = {09639969 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-58149215978&doi=10.1016%2fj.foodres.2008.10.002&partnerID=40&md5=5e48b583fc3944bc3d8c5b11c5681e1e},
    doi = {10.1016/j.foodres.2008.10.002},
    number = {1},
    journal = {Food Research International},
    author = {Najafian, L. and Ghodsvali, A. and Haddad Khodaparast, M. H. and Diosady, L. L.},
    year = {2009},
    pages = {171--175}
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    [Bibtex]
    @article{podzelinska_structure_2009,
    title = {Structure of {PhnP}, a phosphodiesterase of the carbon-phosphorus lyase pathway for phosphonate degradation},
    volume = {284},
    issn = {00219258 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-67650523967&doi=10.1074%2fjbc.M808392200&partnerID=40&md5=4d47eab1b79b0430c8ead9a71bd2ed2b},
    doi = {10.1074/jbc.M808392200},
    number = {25},
    journal = {Journal of Biological Chemistry},
    author = {Podzelinska, K. and He, S. M. and Wathier, M. and Yakunin, A. and Proudfoot, M. and Hove-Jensen, B. and Zechel, D. L. and Jia, Z.},
    year = {2009},
    pages = {17216--17226}
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    [Bibtex]
    @article{powlowski_substrate_2009,
    title = {Substrate recognition and hydrolysis by a fungal xyloglucan-specific family 12 hydrolase},
    volume = {344},
    issn = {00086215 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-66249088373&doi=10.1016%2fj.carres.2009.04.020&partnerID=40&md5=b3b1b4dbf557a23e48c8f1fef8078005},
    doi = {10.1016/j.carres.2009.04.020},
    number = {10},
    journal = {Carbohydrate Research},
    author = {Powlowski, J. and Mahajan, S. and Schapira, M. and Master, E. R.},
    year = {2009},
    pages = {1175--1179}
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    [Bibtex]
    @article{risso_genome-scale_2009,
    title = {Genome-scale comparison and constraint-based metabolic reconstruction of the facultative anaerobic {Fe}({III})-reducer {Rhodoferax} ferrireducens},
    volume = {10},
    issn = {14712164 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-70350460030&doi=10.1186%2f1471-2164-10-447&partnerID=40&md5=1e363e9a9e46b8f3b16e885c1f10cd0a},
    doi = {10.1186/1471-2164-10-447},
    journal = {BMC Genomics},
    author = {Risso, C. and Sun, J. and Zhuang, K. and Mahadevan, R. and DeBoy, R. and Ismail, W. and Shrivastava, S. and Huot, H. and Kothari, S. and Daugherty, S. and Bui, O. and Schilling, C. H. and Lovley, D. R. and Methé, B. A.},
    year = {2009},
    pages = {447}
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    number = {2 SPEC. ISS.},
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    [Bibtex]
    @article{sun_genome-scale_2009,
    title = {Genome-scale constraint-based modeling of {Geobacter} metallireducens},
    volume = {3},
    issn = {17520509 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-60849099919&doi=10.1186%2f1752-0509-3-15&partnerID=40&md5=0db9f49ad2826e4cc8f807b1f4bb4ab5},
    doi = {10.1186/1752-0509-3-15},
    journal = {BMC Systems Biology},
    author = {Sun, J. and Sayyar, B. and Butler, J. E. and Pharkya, P. and Fahland, T. R. and Famili, I. and Schilling, C. H. and Lovley, D. R. and Mahadevan, R.},
    year = {2009}
    }
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    [Bibtex]
    @article{takahashi_korrigan1_2009,
    title = {{KORRIGAN}1 and its aspen homolog {PttCel}9A1 decrease cellulose crystallinity in arabidopsis stems},
    volume = {50},
    issn = {00320781 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-67649333159&doi=10.1093%2fpcp%2fpcp062&partnerID=40&md5=087edd018e18e8ee26156eb744a5fe69},
    doi = {10.1093/pcp/pcp062},
    number = {6},
    journal = {Plant and Cell Physiology},
    author = {Takahashi, J. and Rudsander, U. J. and Hedenstrm, M. and Banasiak, A. and Harholt, J. and Amelot, N. and Immerzeel, P. and Ryden, P. and Endo, S. and Ibatullin, F. M. and Brumer, H. and Del Campillo, E. and Master, E. R. and Vibe Scheller, H. and Sundberg, B. and Teeri, T. T. and Mellerowicz, E. J.},
    year = {2009},
    pages = {1099--1115}
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