Publications


Authors: Type:

2019

  • [DOI] J. A. Obnamia, G. M. Dias, H. L. MacLean, and B. A. Saville, “Comparison of u.s. midwest corn stover ethanol greenhouse gas emissions from greet and ghgenius,” Applied energy, pp. 591-601, 2019.
    [Bibtex]
    @article{RN1154_2019,
    author = {Obnamia, J. A. and Dias, G. M. and MacLean, H. L. and Saville, B. A.},
    title = {Comparison of U.S. Midwest corn stover ethanol greenhouse gas emissions from GREET and GHGenius},
    journal = {Applied Energy},
    pages = {591-601},
    DOI = {10.1016/j.apenergy.2018.10.091},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85056236673&doi=10.1016%2fj.apenergy.2018.10.091&partnerID=40&md5=2ff85c23a7ebfda90ce61613ab74f022},
    year = {2019},
    type = {Journal Article}
    }

2018

  • [DOI] S. Bonilla and D. G. Allen, “Cationic proteins for enhancing biosludge dewaterability: a comparative assessment of surface and conditioning characteristics of synthetic polymers, surfactants and proteins,” Separation and purification technology, vol. 191, pp. 200-207, 2018.
    [Bibtex]
    @article{RN1067_2018,
    author = {Bonilla, S. and Allen, D. G.},
    title = {Cationic proteins for enhancing biosludge dewaterability: A comparative assessment of surface and conditioning characteristics of synthetic polymers, surfactants and proteins},
    journal = {Separation and Purification Technology},
    volume = {191},
    pages = {200-207},
    ISSN = {13835866 (ISSN)},
    DOI = {10.1016/j.seppur.2017.08.048},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85029723270&doi=10.1016%2fj.seppur.2017.08.048&partnerID=40&md5=b00448dfbb17533ae40c407c962ee6d3},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] S. Bonilla, Z. Choolaei, T. Meyer, E. A. Edwards, A. F. Yakunin, and D. G. Allen, “Evaluating the effect of enzymatic pretreatment on the anaerobic digestibility of pulp and paper biosludge,” Biotechnology reports, vol. 17, pp. 77-85, 2018.
    [Bibtex]
    @article{RN1098_2018,
    author = {Bonilla, S. and Choolaei, Z. and Meyer, T. and Edwards, E. A. and Yakunin, A. F. and Allen, D. G.},
    title = {Evaluating the effect of enzymatic pretreatment on the anaerobic digestibility of pulp and paper biosludge},
    journal = {Biotechnology Reports},
    volume = {17},
    pages = {77-85},
    DOI = {10.1016/j.btre.2017.12.009},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85040252111&doi=10.1016%2fj.btre.2017.12.009&partnerID=40&md5=3edb31fe69c257d21a1812b581a9ce4b},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] M. Burda-Grabowska, K. Macegoniuk, R. Flick, B. P. Nocek, A. Joachimiak, A. F. Yakunin, A. Mucha, and Ł. Berlicki, “Bisphosphonic acids and related compounds as inhibitors of nucleotide- and polyphosphate-processing enzymes: a ppk1 and ppk2 case study,” Chemical biology & drug design, 2018.
    [Bibtex]
    @article{RN1149_2018,
    author = {Burda-Grabowska, Małgorzata and Macegoniuk, Katarzyna and Flick, Robert and Nocek, Boguslaw P. and Joachimiak, Andrzej and Yakunin, Alexander F. and Mucha, Artur and Berlicki, Łukasz},
    title = {Bisphosphonic acids and related compounds as inhibitors of nucleotide- and polyphosphate-processing enzymes: A PPK1 and PPK2 case study},
    journal = {Chemical Biology & Drug Design},
    volume = {0},
    number = {0},
    ISSN = {1747-0277},
    DOI = {10.1111/cbdd.13439},
    url = {https://doi.org/10.1111/cbdd.13439},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] A. Cao, N. Alluqmani, F. H. M. Buhari, L. Wasim, L. K. Smith, A. T. Quaile, M. Shannon, Z. Hakim, H. Furmli, D. M. Owen, A. Savchenko, and B. Treanor, “Galectin-9 binds igm-bcr to regulate b cell signaling,” Nature communications, vol. 9, iss. 1, p. 3288, 2018.
    [Bibtex]
    @article{RN1129_2018,
    author = {Cao, Anh and Alluqmani, Nouf and Buhari, Fatima Hifza Mohammed and Wasim, Laabiah and Smith, Logan K. and Quaile, Andrew T. and Shannon, Michael and Hakim, Zaki and Furmli, Hossai and Owen, Dylan M. and Savchenko, Alexei and Treanor, Bebhinn},
    title = {Galectin-9 binds IgM-BCR to regulate B cell signaling},
    journal = {Nature Communications},
    volume = {9},
    number = {1},
    pages = {3288},
    ISSN = {2041-1723},
    DOI = {10.1038/s41467-018-05771-8},
    url = {https://doi.org/10.1038/s41467-018-05771-8},
    year = {2018},
    type = {Journal Article}
    }
  • B. K. Chen and L. L. Diosady, “Production of food-grade canola proteins by membrane-based process,” International news on fats, oils and related materials, vol. 29, iss. 1, pp. 14-17, 2018.
    [Bibtex]
    @article{RN1126_2018,
    author = {Chen, B. K. and Diosady, L. L.},
    title = {Production of food-grade canola proteins by membrane-based process},
    journal = {International News on Fats, Oils and Related Materials},
    volume = {29},
    number = {1},
    pages = {14-17},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85049133926&partnerID=40&md5=f88e7a951d03d8c149e22bce23e53505},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] C. Coscolín, M. Martínez-Martínez, J. Chow, R. Bargiela, A. García-Moyano, G. E. K. Bjerga, A. Bollinger, R. Stokke, I. H. Steen, O. V. Golyshina, M. M. Yakimov, K. E. Jaeger, A. F. Yakunin, W. R. Streit, P. N. Golyshin, and M. Ferrer, “Relationships between substrate promiscuity and chiral selectivity of esterases from phylogenetically and environmentally diverse microorganisms,” Catalysts, vol. 8, iss. 1, 2018.
    [Bibtex]
    @article{RN1102_2018,
    author = {Coscolín, C. and Martínez-Martínez, M. and Chow, J. and Bargiela, R. and García-Moyano, A. and Bjerga, G. E. K. and Bollinger, A. and Stokke, R. and Steen, I. H. and Golyshina, O. V. and Yakimov, M. M. and Jaeger, K. E. and Yakunin, A. F. and Streit, W. R. and Golyshin, P. N. and Ferrer, M.},
    title = {Relationships between substrate promiscuity and chiral selectivity of esterases from phylogenetically and environmentally diverse microorganisms},
    journal = {Catalysts},
    volume = {8},
    number = {1},
    DOI = {10.3390/catal8010010},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85040635268&doi=10.3390%2fcatal8010010&partnerID=40&md5=2b6833e4e75d069e4badc8164e44db8b},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] P. Diep, R. Mahadevan, and A. F. Yakunin, “Heavy metal removal by bioaccumulation using genetically engineered microorganisms,” Frontiers in bioengineering and biotechnology, vol. 6, iss. OCT, 2018.
    [Bibtex]
    @article{RN1147_2018,
    author = {Diep, P. and Mahadevan, R. and Yakunin, A. F.},
    title = {Heavy metal removal by bioaccumulation using genetically engineered microorganisms},
    journal = {Frontiers in Bioengineering and Biotechnology},
    volume = {6},
    number = {OCT},
    DOI = {10.3389/fbioe.2018.00157},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85055739211&doi=10.3389%2ffbioe.2018.00157&partnerID=40&md5=b66b99357d28a6aee37e45a864d72031},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] J. Gandier and E. R. Master, “Pichia pastoris is a suitable host for the heterologous expression of predicted class i and class ii hydrophobins for discovery, study, and application in biotechnology,” Microorganisms, vol. 6, iss. 1, 2018.
    [Bibtex]
    @article{RN1134_2018,
    author = {Gandier, Julie-Anne and Master, R. Emma},
    title = {Pichia pastoris is a Suitable Host for the Heterologous Expression of Predicted Class I and Class II Hydrophobins for Discovery, Study, and Application in Biotechnology},
    journal = {Microorganisms},
    volume = {6},
    number = {1},
    ISSN = {2076-2607},
    DOI = {10.3390/microorganisms6010003},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] R. E. Goacher, E. J. Braham, C. L. Michienzi, R. M. Flick, A. F. Yakunin, and E. R. Master, “Direct analysis by time-of-flight secondary ion mass spectrometry reveals action of bacterial laccase-mediator systems on both hardwood and softwood samples,” Physiologia plantarum, 2018.
    [Bibtex]
    @article{RN1109_2018,
    author = {Goacher, R. E. and Braham, E. J. and Michienzi, C. L. and Flick, R. M. and Yakunin, A. F. and Master, E. R.},
    title = {Direct analysis by time-of-flight secondary ion mass spectrometry reveals action of bacterial laccase-mediator systems on both hardwood and softwood samples},
    journal = {Physiologia Plantarum},
    DOI = {10.1111/ppl.12688},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85043512313&doi=10.1111%2fppl.12688&partnerID=40&md5=917db4834f736798cc003d8f4b89dc84},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] M. Hajighasemi, A. Tchigvintsev, B. Nocek, R. Flick, A. Popovic, T. Hai, A. N. Khusnutdinova, G. Brown, X. Xu, H. Cui, J. Anstett, T. N. Chernikova, T. Brüls, D. Le Paslier, M. M. Yakimov, A. Joachimiak, O. V. Golyshina, A. Savchenko, P. N. Golyshin, E. A. Edwards, and A. F. Yakunin, “Screening and characterization of novel polyesterases from environmental metagenomes with high hydrolytic activity against synthetic polyesters,” Environmental science and technology, 2018.
    [Bibtex]
    @article{RN1145_2018,
    author = {Hajighasemi, M. and Tchigvintsev, A. and Nocek, B. and Flick, R. and Popovic, A. and Hai, T. and Khusnutdinova, A. N. and Brown, G. and Xu, X. and Cui, H. and Anstett, J. and Chernikova, T. N. and Brüls, T. and Le Paslier, D. and Yakimov, M. M. and Joachimiak, A. and Golyshina, O. V. and Savchenko, A. and Golyshin, P. N. and Edwards, E. A. and Yakunin, A. F.},
    title = {Screening and Characterization of Novel Polyesterases from Environmental Metagenomes with High Hydrolytic Activity against Synthetic Polyesters},
    journal = {Environmental Science and Technology},
    DOI = {10.1021/acs.est.8b04252},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85055530370&doi=10.1021%2facs.est.8b04252&partnerID=40&md5=a262116378366e1e1b48edd90dee98d4},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] E. Jurak, H. Suzuki, G. van Erven, J. A. Gandier, P. Wong, K. Chan, C. Y. Ho, Y. Gong, E. Tillier, M. N. Rosso, M. A. Kabel, S. Miyauchi, and E. R. Master, “Dynamics of the phanerochaete carnosa transcriptome during growth on aspen and spruce,” Bmc genomics, vol. 19, iss. 1, p. 815, 2018.
    [Bibtex]
    @article{RN1152_2018,
    author = {Jurak, E. and Suzuki, H. and van Erven, G. and Gandier, J. A. and Wong, P. and Chan, K. and Ho, C. Y. and Gong, Y. and Tillier, E. and Rosso, M. N. and Kabel, M. A. and Miyauchi, S. and Master, E. R.},
    title = {Dynamics of the Phanerochaete carnosa transcriptome during growth on aspen and spruce},
    journal = {BMC genomics},
    volume = {19},
    number = {1},
    pages = {815},
    DOI = {10.1186/s12864-018-5210-z},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85056556078&doi=10.1186%2fs12864-018-5210-z&partnerID=40&md5=6b51c41032254e0b8da46a765678d71d},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] K. Koteva, G. Cox, J. K. Kelso, M. D. Surette, H. L. Zubyk, L. Ejim, P. Stogios, A. Savchenko, D. Sørensen, and G. D. Wright, “Rox, a rifamycin resistance enzyme with an unprecedented mechanism of action,” Cell chemical biology, vol. 25, iss. 4, p. 403-412.e5, 2018.
    [Bibtex]
    @article{RN1132_2018,
    author = {Koteva, Kalinka and Cox, Georgina and Kelso, Jayne K. and Surette, Matthew D. and Zubyk, Haley L. and Ejim, Linda and Stogios, Peter and Savchenko, Alexei and Sørensen, Dan and Wright, Gerard D.},
    title = {Rox, a Rifamycin Resistance Enzyme with an Unprecedented Mechanism of Action},
    journal = {Cell Chemical Biology},
    volume = {25},
    number = {4},
    pages = {403-412.e5},
    ISSN = {2451-9456},
    DOI = {https://doi.org/10.1016/j.chembiol.2018.01.009},
    url = {http://www.sciencedirect.com/science/article/pii/S245194561830031X},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] B. Maccormick, T. V. Vuong, and E. R. Master, “Chemo-enzymatic synthesis of clickable xylo-oligosaccharide monomers from hardwood 4-o-methylglucuronoxylan,” Biomacromolecules, vol. 19, iss. 2, pp. 521-530, 2018.
    [Bibtex]
    @article{RN1107_2018,
    author = {Maccormick, B. and Vuong, T. V. and Master, E. R.},
    title = {Chemo-enzymatic Synthesis of Clickable Xylo-oligosaccharide Monomers from Hardwood 4-O-Methylglucuronoxylan},
    journal = {Biomacromolecules},
    volume = {19},
    number = {2},
    pages = {521-530},
    DOI = {10.1021/acs.biomac.7b01642},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85041924328&doi=10.1021%2facs.biomac.7b01642&partnerID=40&md5=95c7c81d64e6aaa5af861559d4d7f93d},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] M. J. Maurício da Fonseca, E. Jurak, K. Kataja, E. R. Master, J. G. Berrin, I. Stals, T. Desmet, A. Van Landschoot, and Y. Briers, “Analysis of the substrate specificity of α-l-arabinofuranosidases by dna sequencer-aided fluorophore-assisted carbohydrate electrophoresis,” Applied microbiology and biotechnology, 2018.
    [Bibtex]
    @article{RN1140_2018,
    author = {Maurício da Fonseca, M. J. and Jurak, E. and Kataja, K. and Master, E. R. and Berrin, J. G. and Stals, I. and Desmet, T. and Van Landschoot, A. and Briers, Y.},
    title = {Analysis of the substrate specificity of α-L-arabinofuranosidases by DNA sequencer-aided fluorophore-assisted carbohydrate electrophoresis},
    journal = {Applied Microbiology and Biotechnology},
    DOI = {10.1007/s00253-018-9389-3},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85054188828&doi=10.1007%2fs00253-018-9389-3&partnerID=40&md5=dd091c1809a5a6468b389f414a30bcd5},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] M. J. Maurício da Fonseca, E. Jurak, K. Kataja, E. R. Master, J. G. Berrin, I. Stals, T. Desmet, A. Van Landschoot, and Y. Briers, “Analysis of the substrate specificity of α-l-arabinofuranosidases by dna sequencer-aided fluorophore-assisted carbohydrate electrophoresis,” Applied microbiology and biotechnology, 2018.
    [Bibtex]
    @article{RN1143_2018,
    author = {Maurício da Fonseca, M. J. and Jurak, E. and Kataja, K. and Master, E. R. and Berrin, J. G. and Stals, I. and Desmet, T. and Van Landschoot, A. and Briers, Y.},
    title = {Analysis of the substrate specificity of α-L-arabinofuranosidases by DNA sequencer-aided fluorophore-assisted carbohydrate electrophoresis},
    journal = {Applied Microbiology and Biotechnology},
    DOI = {10.1007/s00253-018-9389-3},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85054188828&doi=10.1007%2fs00253-018-9389-3&partnerID=40&md5=dd091c1809a5a6468b389f414a30bcd5},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] E. J. T. McGee and L. L. Diosady, “Prevention of iron-polyphenol complex formation by chelation in black tea,” Lwt – food science and technology, vol. 89, pp. 756-762, 2018.
    [Bibtex]
    @article{RN1095_2018,
    author = {McGee, E. J. T. and Diosady, L. L.},
    title = {Prevention of iron-polyphenol complex formation by chelation in black tea},
    journal = {LWT - Food Science and Technology},
    volume = {89},
    pages = {756-762},
    DOI = {10.1016/j.lwt.2017.11.041},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85037340205&doi=10.1016%2fj.lwt.2017.11.041&partnerID=40&md5=57c77a4c2b53d9552b55017de8a51b68},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] T. Meyer, P. Amin, D. G. Allen, and H. Tran, “Dewatering of pulp and paper mill biosludge and primary sludge,” Journal of environmental chemical engineering, vol. 6, iss. 5, pp. 6317-6321, 2018.
    [Bibtex]
    @article{RN1157_2018,
    author = {Meyer, T. and Amin, P. and Allen, D. G. and Tran, H.},
    title = {Dewatering of pulp and paper mill biosludge and primary sludge},
    journal = {Journal of Environmental Chemical Engineering},
    volume = {6},
    number = {5},
    pages = {6317-6321},
    DOI = {10.1016/j.jece.2018.09.037},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85054600364&doi=10.1016%2fj.jece.2018.09.037&partnerID=40&md5=d03764cdd62786e342eb3f9939939b50},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] O. Molenda, S. Tang, L. Lomheim, V. K. Gautam, S. Lemak, A. F. Yakunin, K. L. Maxwell, and E. A. Edwards, “Extrachromosomal circular elements targeted by crispr-cas in dehalococcoides mccartyi are linked to mobilization of reductive dehalogenase genes,” The isme journal, 2018.
    [Bibtex]
    @article{RN1130_2018,
    author = {Molenda, Olivia and Tang, Shuiquan and Lomheim, Line and Gautam, Vasu K. and Lemak, Sofia and Yakunin, Alexander F. and Maxwell, Karen L. and Edwards, Elizabeth A.},
    title = {Extrachromosomal circular elements targeted by CRISPR-Cas in Dehalococcoides mccartyi are linked to mobilization of reductive dehalogenase genes},
    journal = {The ISME Journal},
    ISSN = {1751-7370},
    DOI = {10.1038/s41396-018-0254-2},
    url = {https://doi.org/10.1038/s41396-018-0254-2},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] K. Nemr, J. E. N. Müller, J. C. Joo, P. Gawand, R. Choudhary, B. Mendonca, S. Lu, X. Yu, A. F. Yakunin, and R. Mahadevan, “Engineering a short, aldolase-based pathway for (r)-1,3-butanediol production in escherichia coli,” Metabolic engineering, vol. 48, pp. 13-24, 2018.
    [Bibtex]
    @article{RN1121_2018,
    author = {Nemr, K. and Müller, J. E. N. and Joo, J. C. and Gawand, P. and Choudhary, R. and Mendonca, B. and Lu, S. and Yu, X. and Yakunin, A. F. and Mahadevan, R.},
    title = {Engineering a short, aldolase-based pathway for (R)-1,3-butanediol production in Escherichia coli},
    journal = {Metabolic Engineering},
    volume = {48},
    pages = {13-24},
    DOI = {10.1016/j.ymben.2018.04.013},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85047253589&doi=10.1016%2fj.ymben.2018.04.013&partnerID=40&md5=e3f2563aa80421f5f4ffb013914963d1},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] B. P. Nocek, A. N. Khusnutdinova, M. Ruszkowski, R. Flick, M. Burda, K. Batyrova, G. Brown, A. Mucha, A. Joachimiak, L. Berlicki, and A. F. Yakunin, “Structural insights into substrate selectivity and activity of bacterial polyphosphate kinases,” Acs catalysis, 2018.
    [Bibtex]
    @article{RN1139_2018,
    author = {Nocek, Boguslaw P. and Khusnutdinova, Anna N. and Ruszkowski, Milosz and Flick, Robert and Burda, Malgorzata and Batyrova, Khorcheska and Brown, Greg and Mucha, Artur and Joachimiak, Andrzej and Berlicki, Lukasz and Yakunin, Alexander F.},
    title = {Structural insights into substrate selectivity and activity of bacterial polyphosphate kinases},
    journal = {ACS Catalysis},
    DOI = {10.1021/acscatal.8b03151},
    url = {https://doi.org/10.1021/acscatal.8b03151},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] B. P. Nocek, A. N. Khusnutdinova, M. Ruszkowski, R. Flick, M. Burda, K. Batyrova, G. Brown, A. Mucha, A. Joachimiak, L. Berlicki, and A. F. Yakunin, “Structural insights into substrate selectivity and activity of bacterial polyphosphate kinases,” Acs catalysis, vol. 8, iss. 11, pp. 10746-10760, 2018.
    [Bibtex]
    @article{RN1148_2018,
    author = {Nocek, B. P. and Khusnutdinova, A. N. and Ruszkowski, M. and Flick, R. and Burda, M. and Batyrova, K. and Brown, G. and Mucha, A. and Joachimiak, A. and Berlicki, L. and Yakunin, A. F.},
    title = {Structural Insights into Substrate Selectivity and Activity of Bacterial Polyphosphate Kinases},
    journal = {ACS Catalysis},
    volume = {8},
    number = {11},
    pages = {10746-10760},
    DOI = {10.1021/acscatal.8b03151},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85055645259&doi=10.1021%2facscatal.8b03151&partnerID=40&md5=c806ffcfceb2677549ce337f0c7e26fb},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] A. C. Pawlowski, P. J. Stogios, K. Koteva, T. Skarina, E. Evdokimova, A. Savchenko, and G. D. Wright, “The evolution of substrate discrimination in macrolide antibiotic resistance enzymes,” Nature communications, vol. 9, iss. 1, p. 112, 2018.
    [Bibtex]
    @article{RN1133_2018,
    author = {Pawlowski, Andrew C. and Stogios, Peter J. and Koteva, Kalinka and Skarina, Tatiana and Evdokimova, Elena and Savchenko, Alexei and Wright, Gerard D.},
    title = {The evolution of substrate discrimination in macrolide antibiotic resistance enzymes},
    journal = {Nature Communications},
    volume = {9},
    number = {1},
    pages = {112},
    ISSN = {2041-1723},
    DOI = {10.1038/s41467-017-02680-0},
    url = {https://doi.org/10.1038/s41467-017-02680-0},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] A. Pérez-de-Mora, A. Lacourt, M. L. McMaster, X. Liang, S. M. Dworatzek, and E. A. Edwards, “Chlorinated electron acceptor abundance drives selection of dehalococcoides mccartyi (d. mccartyi) strains in dechlorinating enrichment cultures and groundwater environments,” Frontiers in microbiology, vol. 9, iss. MAY, 2018.
    [Bibtex]
    @article{RN1120_2018,
    author = {Pérez-de-Mora, A. and Lacourt, A. and McMaster, M. L. and Liang, X. and Dworatzek, S. M. and Edwards, E. A.},
    title = {Chlorinated electron acceptor abundance drives selection of Dehalococcoides mccartyi (D. mccartyi) strains in dechlorinating enrichment cultures and groundwater environments},
    journal = {Frontiers in Microbiology},
    volume = {9},
    number = {MAY},
    DOI = {10.3389/fmicb.2018.00812},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85047150128&doi=10.3389%2ffmicb.2018.00812&partnerID=40&md5=0cdd3bc53b4313448b19fec645e70f16},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] J. C. H. Poon, Z. Liao, T. Suzuki, M. M. Carleton, J. P. Soleas, J. S. Aitchison, G. Karoubi, A. P. McGuigan, and T. K. Waddell, “Design of biomimetic substrates for long-term maintenance of alveolar epithelial cells,” Biomaterials science, vol. 6, iss. 2, pp. 292-303, 2018.
    [Bibtex]
    @article{RN1103_2018,
    author = {Poon, J. C. H. and Liao, Z. and Suzuki, T. and Carleton, M. M. and Soleas, J. P. and Aitchison, J. S. and Karoubi, G. and McGuigan, A. P. and Waddell, T. K.},
    title = {Design of biomimetic substrates for long-term maintenance of alveolar epithelial cells},
    journal = {Biomaterials Science},
    volume = {6},
    number = {2},
    pages = {292-303},
    DOI = {10.1039/c7bm00647k},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85041332252&doi=10.1039%2fc7bm00647k&partnerID=40&md5=debc0b39bd89db1afd8368ce0e76bf4d},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] W. Qiao, F. Luo, L. Lomheim, E. E. Mack, S. Ye, J. Wu, and E. A. Edwards, “A dehalogenimonas population respires 1,2,4-trichlorobenzene and dichlorobenzenes,” Environmental science & technology, vol. 52, iss. 22, pp. 13391-13398, 2018.
    [Bibtex]
    @article{RN1151_2018,
    author = {Qiao, W. and Luo, F. and Lomheim, L. and Mack, E. E. and Ye, S. and Wu, J. and Edwards, E. A.},
    title = {A Dehalogenimonas Population Respires 1,2,4-Trichlorobenzene and Dichlorobenzenes},
    journal = {Environmental science & technology},
    volume = {52},
    number = {22},
    pages = {13391-13398},
    DOI = {10.1021/acs.est.8b04239},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85056731278&doi=10.1021%2facs.est.8b04239&partnerID=40&md5=2b2d33e492cbcb2401df6112e3672eb3},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] A. T. Quaile, P. J. Stogios, O. Egorova, E. Evdokimova, D. Valleau, B. Nocek, P. S. Kompella, S. Peisajovich, A. F. Yakunin, A. W. Ensminger, and A. Savchenko, “The legionella pneumophila effector ceg4 is a phosphotyrosine phosphatase that attenuates activation of eukaryotic mapk pathways,” Journal of biological chemistry, vol. 293, iss. 9, pp. 3307-3320, 2018.
    [Bibtex]
    @article{RN1123_2018,
    author = {Quaile, A. T. and Stogios, P. J. and Egorova, O. and Evdokimova, E. and Valleau, D. and Nocek, B. and Kompella, P. S. and Peisajovich, S. and Yakunin, A. F. and Ensminger, A. W. and Savchenko, A.},
    title = {The Legionella pneumophila effector Ceg4 is a phosphotyrosine phosphatase that attenuates activation of eukaryotic MAPK pathways},
    journal = {Journal of Biological Chemistry},
    volume = {293},
    number = {9},
    pages = {3307-3320},
    DOI = {10.1074/jbc.M117.812727},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85042920908&doi=10.1074%2fjbc.M117.812727&partnerID=40&md5=4a3a2c0561cd1228bc4c48afa8a0a7fb},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] K. Raj, S. Partow, K. Correia, A. N. Khusnutdinova, A. F. Yakunin, and R. Mahadevan, “Biocatalytic production of adipic acid from glucose using engineered saccharomyces cerevisiae,” Metabolic engineering communications, vol. 6, pp. 28-32, 2018.
    [Bibtex]
    @article{RN1105_2018,
    author = {Raj, Kaushik and Partow, Siavash and Correia, Kevin and Khusnutdinova, Anna N. and Yakunin, Alexander F. and Mahadevan, Radhakrishnan},
    title = {Biocatalytic production of adipic acid from glucose using engineered Saccharomyces cerevisiae},
    journal = {Metabolic Engineering Communications},
    volume = {6},
    pages = {28-32},
    ISSN = {2214-0301},
    DOI = {https://doi.org/10.1016/j.meteno.2018.02.001},
    url = {https://www.sciencedirect.com/science/article/pii/S2214030117300275},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] F. M. Razeq, E. Jurak, P. J. Stogios, R. Yan, M. Tenkanen, M. A. Kabel, W. Wang, and E. R. Master, “A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans,” Biotechnology for biofuels, vol. 11, iss. 1, p. 74, 2018.
    [Bibtex]
    @article{RN1111_2018,
    author = {Razeq, Fakhria M. and Jurak, Edita and Stogios, Peter J. and Yan, Ruoyu and Tenkanen, Maija and Kabel, Mirjam A. and Wang, Weijun and Master, Emma R.},
    title = {A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans},
    journal = {Biotechnology for Biofuels},
    volume = {11},
    number = {1},
    pages = {74},
    ISSN = {1754-6834},
    DOI = {10.1186/s13068-018-1074-3},
    url = {https://doi.org/10.1186/s13068-018-1074-3},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] D. Rodenhizer, T. Dean, E. D’Arcangelo, and A. P. McGuigan, “The current landscape of 3d in vitro tumor models: what cancer hallmarks are accessible for drug discovery?,” Advanced healthcare materials, 2018.
    [Bibtex]
    @article{RN1100_2018,
    author = {Rodenhizer, D. and Dean, T. and D'Arcangelo, E. and McGuigan, A. P.},
    title = {The Current Landscape of 3D In Vitro Tumor Models: What Cancer Hallmarks Are Accessible for Drug Discovery?},
    journal = {Advanced Healthcare Materials},
    DOI = {10.1002/adhm.201701174},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85040729482&doi=10.1002%2fadhm.201701174&partnerID=40&md5=38661a7311b6278714e085b43f1cb9eb},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] D. Rodenhizer, T. Dean, B. Xu, D. Cojocari, and A. P. McGuigan, “A three-dimensional engineered heterogeneous tumor model for assessing cellular environment and response,” Nature protocols, vol. 13, iss. 9, pp. 1917-1957, 2018.
    [Bibtex]
    @article{RN1137_2018,
    author = {Rodenhizer, D. and Dean, T. and Xu, B. and Cojocari, D. and McGuigan, A. P.},
    title = {A three-dimensional engineered heterogeneous tumor model for assessing cellular environment and response},
    journal = {Nature Protocols},
    volume = {13},
    number = {9},
    pages = {1917-1957},
    DOI = {10.1038/s41596-018-0022-9},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85053302182&doi=10.1038%2fs41596-018-0022-9&partnerID=40&md5=0491e410c10268f66f35be2dac82800e},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] Y. K. Salkuyeh, B. A. Saville, and H. L. MacLean, “Techno-economic analysis and life cycle assessment of hydrogen production from different biomass gasification processes,” International journal of hydrogen energy, 2018.
    [Bibtex]
    @article{RN1118_2018,
    author = {Salkuyeh, Yaser Khojasteh and Saville, Bradley A. and MacLean, Heather L.},
    title = {Techno-economic analysis and life cycle assessment of hydrogen production from different biomass gasification processes},
    journal = {International Journal of Hydrogen Energy},
    ISSN = {0360-3199},
    DOI = {https://doi.org/10.1016/j.ijhydene.2018.04.024},
    url = {http://www.sciencedirect.com/science/article/pii/S0360319918311182},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] B. A. Saville and S. Saville, “Xylooligosaccharidesand arabinoxylanoligosaccharides and their application as prebiotics,” Applied food biotechnology, vol. 5, iss. 3, pp. 121-130, 2018.
    [Bibtex]
    @article{RN1125_2018,
    author = {Saville, B. A. and Saville, S.},
    title = {Xylooligosaccharidesand arabinoxylanoligosaccharides and their application as prebiotics},
    journal = {Applied Food Biotechnology},
    volume = {5},
    number = {3},
    pages = {121-130},
    DOI = {10.22037/afb.v%vi%i.20212},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85049595875&doi=10.22037%2fafb.v%25vi%25i.20212&partnerID=40&md5=98f381d424e059133c2a7215a0678f39},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] S. Sinichi and L. L. Diosady, “Recovery and recycling of isopropyl alcohol used in biodiesel production from yellow mustard oil,” Jaocs, journal of the american oil chemists’ society, vol. 95, iss. 6, pp. 753-765, 2018.
    [Bibtex]
    @article{RN1127_2018,
    author = {Sinichi, S. and Diosady, L. L.},
    title = {Recovery and Recycling of Isopropyl Alcohol Used in Biodiesel Production From Yellow Mustard Oil},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    volume = {95},
    number = {6},
    pages = {753-765},
    DOI = {10.1002/aocs.12064},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85049050661&doi=10.1002%2faocs.12064&partnerID=40&md5=e6bc30a02e43a327848319c22c5db380},
    year = {2018},
    type = {Journal Article}
    }
  • S. Sinichi and L. L. Diosady, “Salting out versus pervaporation in ipa recovery system,” International news on fats, oils and related materials, vol. 29, iss. 9, pp. 23-26, 2018.
    [Bibtex]
    @article{RN1153_2018,
    author = {Sinichi, S. and Diosady, L. L.},
    title = {Salting out versus pervaporation in IPA recovery system},
    journal = {International News on Fats, Oils and Related Materials},
    volume = {29},
    number = {9},
    pages = {23-26},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85056336264&partnerID=40&md5=acf6d58f2a810d412f72547169eaa7fa},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] S. Sinichi, A. V. L. Siañez, and L. L. Diosady, “Recovery of phenolic compounds from the by-products of yellow mustard protein isolation,” Food research international, 2018.
    [Bibtex]
    @article{RN1142_2018,
    author = {Sinichi, S. and Siañez, A. V. L. and Diosady, L. L.},
    title = {Recovery of phenolic compounds from the by-products of yellow mustard protein isolation},
    journal = {Food Research International},
    DOI = {10.1016/j.foodres.2018.10.047},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85055128582&doi=10.1016%2fj.foodres.2018.10.047&partnerID=40&md5=1da400a9735c4d191e51b8d457a59a3f},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] P. J. Stogios, G. Cox, H. L. Zubyk, E. Evdokimova, Z. Wawrzak, G. D. Wright, and A. Savchenko, “Substrate recognition by a colistin resistance enzyme from moraxella catarrhalis,” Acs chemical biology, vol. 13, iss. 5, pp. 1322-1332, 2018.
    [Bibtex]
    @article{RN1122_2018,
    author = {Stogios, P. J. and Cox, G. and Zubyk, H. L. and Evdokimova, E. and Wawrzak, Z. and Wright, G. D. and Savchenko, A.},
    title = {Substrate Recognition by a Colistin Resistance Enzyme from Moraxella catarrhalis},
    journal = {ACS Chemical Biology},
    volume = {13},
    number = {5},
    pages = {1322-1332},
    DOI = {10.1021/acschembio.8b00116},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85047501291&doi=10.1021%2facschembio.8b00116&partnerID=40&md5=524fcbdaf69c4668b9f524281540c6dc},
    year = {2018},
    type = {Journal Article}
    }
  • D. Valleau, D. J. Little, D. Borek, T. Skarina, A. T. Quaile, R. Di Leo, S. Houliston, A. Lemak, C. H. Arrowsmith, B. K. Coombes, and A. Savchenko, “Functional diversification of the nleg effector family in enterohemorrhagic <em>escherichia coli</em&gt,” Proceedings of the national academy of sciences, 2018.
    [Bibtex]
    @article{RN1136_2018,
    author = {Valleau, Dylan and Little, Dustin J. and Borek, Dominika and Skarina, Tatiana and Quaile, Andrew T. and Di Leo, Rosa and Houliston, Scott and Lemak, Alexander and Arrowsmith, Cheryl H. and Coombes, Brian K. and Savchenko, Alexei},
    title = {Functional diversification of the NleG effector family in enterohemorrhagic <em>Escherichia coli</em>},
    journal = {Proceedings of the National Academy of Sciences},
    url = {http://www.pnas.org/content/early/2018/09/13/1718350115.abstract},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] D. Valleau, A. T. Quaile, H. Cui, X. Xu, E. Evdokimova, C. Chang, M. E. Cuff, M. L. Urbanus, S. Houliston, C. H. Arrowsmith, A. W. Ensminger, and A. Savchenko, “Discovery of ubiquitin deamidases in the pathogenic arsenal of legionella pneumophila,” Cell reports, vol. 23, iss. 2, pp. 568-583, 2018.
    [Bibtex]
    @article{RN1117_2018,
    author = {Valleau, Dylan and Quaile, Andrew T. and Cui, Hong and Xu, Xiaohui and Evdokimova, Elena and Chang, Changsoo and Cuff, Marianne E. and Urbanus, Malene L. and Houliston, Scott and Arrowsmith, Cheryl H. and Ensminger, Alexander W. and Savchenko, Alexei},
    title = {Discovery of Ubiquitin Deamidases in the Pathogenic Arsenal of Legionella pneumophila},
    journal = {Cell Reports},
    volume = {23},
    number = {2},
    pages = {568-583},
    ISSN = {2211-1247},
    DOI = {https://doi.org/10.1016/j.celrep.2018.03.060},
    url = {https://www.sciencedirect.com/science/article/pii/S2211124718304054},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] P. H. Wang, A. N. Khusnutdinova, F. Luo, J. Xiao, K. Nemr, R. Flick, G. Brown, R. Mahadevan, E. A. Edwards, and A. F. Yakunin, “Biosynthesis and activity of prenylated fmn cofactors,” Cell chemical biology, 2018.
    [Bibtex]
    @article{RN1119_2018,
    author = {Wang, P. H. and Khusnutdinova, A. N. and Luo, F. and Xiao, J. and Nemr, K. and Flick, R. and Brown, G. and Mahadevan, R. and Edwards, E. A. and Yakunin, A. F.},
    title = {Biosynthesis and Activity of Prenylated FMN Cofactors},
    journal = {Cell Chemical Biology},
    DOI = {10.1016/j.chembiol.2018.02.007},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85045909652&doi=10.1016%2fj.chembiol.2018.02.007&partnerID=40&md5=a35319a3baca4ffd69ac729f5d28fc0e},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] P. Wang, A. N. Khusnutdinova, F. Luo, J. Xiao, K. Nemr, R. Flick, G. Brown, R. Mahadevan, E. A. Edwards, and A. F. Yakunin, “Biosynthesis and activity of prenylated fmn cofactors,” Cell chemical biology, 2018.
    [Bibtex]
    @article{RN1110_2018,
    author = {Wang, Po-Hsiang and Khusnutdinova, Anna N. and Luo, Fei and Xiao, Johnny and Nemr, Kayla and Flick, Robert and Brown, Greg and Mahadevan, Radhakrishnan and Edwards, Elizabeth A. and Yakunin, Alexander F.},
    title = {Biosynthesis and Activity of Prenylated FMN Cofactors},
    journal = {Cell Chemical Biology},
    ISSN = {2451-9456},
    DOI = {https://doi.org/10.1016/j.chembiol.2018.02.007},
    url = {https://www.sciencedirect.com/science/article/pii/S2451945618300710},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] W. Wang, N. Andric, C. Sarch, B. T. Silva, M. Tenkanen, and E. R. Master, “Constructing arabinofuranosidases for dual arabinoxylan debranching activity,” Biotechnology and bioengineering, vol. 115, iss. 1, pp. 41-49, 2018.
    [Bibtex]
    @article{RN1092_2018,
    author = {Wang, W. and Andric, N. and Sarch, C. and Silva, B. T. and Tenkanen, M. and Master, E. R.},
    title = {Constructing arabinofuranosidases for dual arabinoxylan debranching activity},
    journal = {Biotechnology and Bioengineering},
    volume = {115},
    number = {1},
    pages = {41-49},
    ISSN = {00063592 (ISSN)},
    DOI = {10.1002/bit.26445},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85035033739&doi=10.1002%2fbit.26445&partnerID=40&md5=b7900ba1f1f927207619b29fbb5afd99},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] B. Wu, J. Gaskell, B. W. Held, C. Toapanta, T. Vuong, S. Ahrendt, A. Lipzen, J. Zhang, J. S. Schilling, E. Master, I. V. Grigoriev, R. A. Blanchette, D. Cullen, and D. S. Hibbett, “Substrate-specific differential gene expression and rna editing in the brown rot fungus fomitopsis pinicola,” Appl environ microbiol, 2018.
    [Bibtex]
    @article{RN1124_2018,
    author = {Wu, B. and Gaskell, J. and Held, B. W. and Toapanta, C. and Vuong, T. and Ahrendt, S. and Lipzen, A. and Zhang, J. and Schilling, J. S. and Master, E. and Grigoriev, I. V. and Blanchette, R. A. and Cullen, D. and Hibbett, D. S.},
    title = {Substrate-Specific Differential Gene Expression and RNA editing in the Brown Rot Fungus Fomitopsis pinicola},
    journal = {Appl Environ Microbiol},
    ISSN = {0099-2240},
    DOI = {10.1128/aem.00991-18},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] Y. F. Xu, W. Lu, J. C. Chen, S. A. Johnson, P. A. Gibney, D. G. Thomas, G. Brown, A. L. May, S. R. Campagna, A. F. Yakunin, D. Botstein, and J. D. Rabinowitz, “Discovery and functional characterization of a yeast sugar alcohol phosphatase,” Acs chemical biology, 2018.
    [Bibtex]
    @article{RN1141_2018,
    author = {Xu, Y. F. and Lu, W. and Chen, J. C. and Johnson, S. A. and Gibney, P. A. and Thomas, D. G. and Brown, G. and May, A. L. and Campagna, S. R. and Yakunin, A. F. and Botstein, D. and Rabinowitz, J. D.},
    title = {Discovery and Functional Characterization of a Yeast Sugar Alcohol Phosphatase},
    journal = {ACS Chemical Biology},
    DOI = {10.1021/acschembio.8b00804},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85054733885&doi=10.1021%2facschembio.8b00804&partnerID=40&md5=2ba6c263b5276d6367eb496abf6718a8},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] M. Young, D. Rodenhizer, T. Dean, E. D’Arcangelo, B. Xu, L. Ailles, and A. P. McGuigan, “A tracer 3d co-culture tumour model for head and neck cancer,” Biomaterials, vol. 164, pp. 54-69, 2018.
    [Bibtex]
    @article{RN1108_2018,
    author = {Young, M. and Rodenhizer, D. and Dean, T. and D'Arcangelo, E. and Xu, B. and Ailles, L. and McGuigan, A. P.},
    title = {A TRACER 3D Co-Culture tumour model for head and neck cancer},
    journal = {Biomaterials},
    volume = {164},
    pages = {54-69},
    DOI = {10.1016/j.biomaterials.2018.01.038},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85042418249&doi=10.1016%2fj.biomaterials.2018.01.038&partnerID=40&md5=6b94feb5f70c1ceea1f4702f576b92c9},
    year = {2018},
    type = {Journal Article}
    }

2017

  • [DOI] M. Andberg, F. Mollerup, K. Parikka, S. Koutaniemi, H. Boer, M. Juvonen, E. Master, M. Tenkanen, and K. Kruus, “A novel colletotrichum graminicola raffinose oxidase in the aa5 family,” Applied and environmental microbiology, vol. 83, iss. 20, 2017.
    [Bibtex]
    @article{RN1068_2017,
    author = {Andberg, M. and Mollerup, F. and Parikka, K. and Koutaniemi, S. and Boer, H. and Juvonen, M. and Master, E. and Tenkanen, M. and Kruus, K.},
    title = {A novel Colletotrichum graminicola raffinose oxidase in the AA5 family},
    journal = {Applied and Environmental Microbiology},
    volume = {83},
    number = {20},
    DOI = {10.1128/AEM.01383-17},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85030697826&doi=10.1128%2fAEM.01383-17&partnerID=40&md5=5622c0d4a1efa25df1403582d46940e2},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] Y. Azimi, Y. Liu, T. C. Tan, D. G. Allen, and R. R. Farnood, “The tail of two models: impact of circularity and biomass non-homogeneity on uv disinfection of wastewater flocs,” Water research, vol. 126, pp. 70-78, 2017.
    [Bibtex]
    @article{RN1066_2017,
    author = {Azimi, Y. and Liu, Y. and Tan, T. C. and Allen, D. G. and Farnood, R. R.},
    title = {The tail of two models: Impact of circularity and biomass non-homogeneity on UV disinfection of wastewater flocs},
    journal = {Water Research},
    volume = {126},
    pages = {70-78},
    DOI = {10.1016/j.watres.2017.09.011},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85029393081&doi=10.1016%2fj.watres.2017.09.011&partnerID=40&md5=a92d3cb86183d4dcbd3e449a73eaff8d},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] P. L. Chu, C. Vanderghem, H. L. MacLean, and B. A. Saville, “Process modeling of hydrodeoxygenation to produce renewable jet fuel and other hydrocarbon fuels,” Fuel, vol. 196, pp. 298-305, 2017.
    [Bibtex]
    @article{RN1038_2017,
    author = {Chu, P. L. and Vanderghem, C. and MacLean, H. L. and Saville, B. A.},
    title = {Process modeling of hydrodeoxygenation to produce renewable jet fuel and other hydrocarbon fuels},
    journal = {Fuel},
    volume = {196},
    pages = {298-305},
    DOI = {10.1016/j.fuel.2017.01.097},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85012074001&doi=10.1016%2fj.fuel.2017.01.097&partnerID=40&md5=ba31d4d1c68e0bc7ac1dc644294d4e2a},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] M. A. Currie, G. Brown, A. Wong, T. Ohira, K. Sugiyama, T. Suzuki, A. F. Yakunin, and Z. Jia, “Structural and functional characterization of the tyw3/taw3 class of sam-dependent methyltransferases,” Rna, vol. 23, iss. 3, pp. 346-354, 2017.
    [Bibtex]
    @article{RN1043_2017,
    author = {Currie, M. A. and Brown, G. and Wong, A. and Ohira, T. and Sugiyama, K. and Suzuki, T. and Yakunin, A. F. and Jia, Z.},
    title = {Structural and functional characterization of the TYW3/Taw3 class of SAM-dependent methyltransferases},
    journal = {RNA},
    volume = {23},
    number = {3},
    pages = {346-354},
    DOI = {10.1261/rna.057943},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85015258335&doi=10.1261%2frna.057943&partnerID=40&md5=71e93b5d3a5d53ab68fb232f009473b6},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] V. Dueik, B. K. Chen, and L. L. Diosady, “Iron-polyphenol interaction reduces iron bioavailability in fortified tea: competing complexation to ensure iron bioavailability,” Journal of food quality, vol. 2017, 2017.
    [Bibtex]
    @article{RN1062_2017,
    author = {Dueik, V. and Chen, B. K. and Diosady, L. L.},
    title = {Iron-polyphenol interaction reduces iron bioavailability in fortified tea: Competing complexation to ensure iron bioavailability},
    journal = {Journal of Food Quality},
    volume = {2017},
    DOI = {10.1155/2017/1805047},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85025447364&doi=10.1155%2f2017%2f1805047&partnerID=40&md5=f722f70cfe99ef9139e065dbfbbbda89},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] J. A. Gandier, D. N. Langelaan, A. Won, K. O’Donnell, J. L. Grondin, H. L. Spencer, P. Wong, E. Tillier, C. Yip, S. P. Smith, and E. R. Master, “Characterization of a basidiomycota hydrophobin reveals the structural basis for a high-similarity class i subdivision,” Scientific reports, vol. 7, 2017.
    [Bibtex]
    @article{RN1046_2017,
    author = {Gandier, J. A. and Langelaan, D. N. and Won, A. and O'Donnell, K. and Grondin, J. L. and Spencer, H. L. and Wong, P. and Tillier, E. and Yip, C. and Smith, S. P. and Master, E. R.},
    title = {Characterization of a Basidiomycota hydrophobin reveals the structural basis for a high-similarity Class I subdivision},
    journal = {Scientific Reports},
    volume = {7},
    DOI = {10.1038/srep45863},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85017303568&doi=10.1038%2fsrep45863&partnerID=40&md5=3ecff951be81e92f69f085d95eeb24d9},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] S. Garg, K. Judd, R. Mahadevan, E. Edwards, and V. G. Papangelakis, “Leaching characteristics of nickeliferous pyrrhotite tailings from the sudbury, ontario area,” Canadian metallurgical quarterly, pp. 1-10, 2017.
    [Bibtex]
    @article{RN1070_2017,
    author = {Garg, Srinath and Judd, Kurtis and Mahadevan, Radhakrishnan and Edwards, Elizabeth and Papangelakis, Vladimiros G.},
    title = {Leaching characteristics of nickeliferous pyrrhotite tailings from the Sudbury, Ontario area},
    journal = {Canadian Metallurgical Quarterly},
    pages = {1-10},
    ISSN = {0008-4433},
    DOI = {10.1080/00084433.2017.1361162},
    url = {http://dx.doi.org/10.1080/00084433.2017.1361162},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] S. Garg, V. Papangelakis, E. Edwards, and R. Mahadevan, “Application of a selective dissolution protocol to quantify the terminal dissolution extents of pyrrhotite and pentlandite from pyrrhotite tailings,” International journal of mineral processing, vol. 158, pp. 27-34, 2017.
    [Bibtex]
    @article{RN380_2017,
    author = {Garg, S. and Papangelakis, V. and Edwards, E. and Mahadevan, R.},
    title = {Application of a selective dissolution protocol to quantify the terminal dissolution extents of pyrrhotite and pentlandite from pyrrhotite tailings},
    journal = {International Journal of Mineral Processing},
    volume = {158},
    pages = {27-34},
    ISSN = {03017516 (ISSN)},
    DOI = {10.1016/j.minpro.2016.11.004},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84997610874&doi=10.1016%2fj.minpro.2016.11.004&partnerID=40&md5=7d66b41934fd4c344be51e45d2c77aa6},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] J. Gaskell, P. Kersten, L. F. Larrondo, P. Canessa, D. Martinez, D. Hibbett, M. Schmoll, C. P. Kubicek, A. T. Martinez, J. Yadav, E. Master, J. K. Magnuson, D. Yaver, R. Berka, K. Lail, C. Chen, K. LaButti, M. Nolan, A. Lipzen, A. Aerts, R. Riley, K. Barry, B. Henrissat, R. Blanchette, I. V. Grigoriev, and D. Cullen, “Draft genome sequence of a monokaryotic model brown-rot fungus postia (rhodonia) placenta sb12,” Genomics data, vol. 14, pp. 21-23, 2017.
    [Bibtex]
    @article{RN1091_2017,
    author = {Gaskell, J. and Kersten, P. and Larrondo, L. F. and Canessa, P. and Martinez, D. and Hibbett, D. and Schmoll, M. and Kubicek, C. P. and Martinez, A. T. and Yadav, J. and Master, E. and Magnuson, J. K. and Yaver, D. and Berka, R. and Lail, K. and Chen, C. and LaButti, K. and Nolan, M. and Lipzen, A. and Aerts, A. and Riley, R. and Barry, K. and Henrissat, B. and Blanchette, R. and Grigoriev, I. V. and Cullen, D.},
    title = {Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12},
    journal = {Genomics Data},
    volume = {14},
    pages = {21-23},
    ISSN = {22135960 (ISSN)},
    DOI = {10.1016/j.gdata.2017.08.003},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85034456080&doi=10.1016%2fj.gdata.2017.08.003&partnerID=40&md5=871512b76e3445c033bf6862acb1a496},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] R. E. Goacher, E. J. Braham, C. L. Michienzi, R. M. Flick, A. F. Yakunin, and E. R. Master, “Direct analysis by time-of-flight secondary ion mass spectrometry (tof-sims) reveals action of bacterial laccase-mediator system on both hardwood and softwood samples,” Physiol plant, 2017.
    [Bibtex]
    @article{RN1097_2017,
    author = {Goacher, R. E. and Braham, E. J. and Michienzi, C. L. and Flick, R. M. and Yakunin, A. F. and Master, E. R.},
    title = {Direct analysis by Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) reveals action of bacterial laccase-mediator system on both hardwood and softwood samples},
    journal = {Physiol Plant},
    ISSN = {0031-9317},
    DOI = {10.1111/ppl.12688},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] O. V. Golyshina, H. Tran, O. N. Reva, S. Lemak, A. F. Yakunin, A. Goesmann, T. Y. Nechitaylo, V. Lacono, F. Smedile, A. Slesarev, D. Rojo, C. Barbas, M. Ferrer, M. M. Yakimov, and P. N. Golyshin, “Metabolic and evolutionary patterns in the extremely acidophilic archaeon ferroplasma acidiphilum yt,” Scientific reports, vol. 7, iss. 1, 2017.
    [Bibtex]
    @article{RN1057_2017,
    author = {Golyshina, O. V. and Tran, H. and Reva, O. N. and Lemak, S. and Yakunin, A. F. and Goesmann, A. and Nechitaylo, T. Y. and Lacono, V. and Smedile, F. and Slesarev, A. and Rojo, D. and Barbas, C. and Ferrer, M. and Yakimov, M. M. and Golyshin, P. N.},
    title = {Metabolic and evolutionary patterns in the extremely acidophilic archaeon Ferroplasma acidiphilum YT},
    journal = {Scientific Reports},
    volume = {7},
    number = {1},
    DOI = {10.1038/s41598-017-03904-5},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85020945306&doi=10.1038%2fs41598-017-03904-5&partnerID=40&md5=29d08d35bd8fd68563dc67b2ab8e9929},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] S. Javaherian, E. D’Arcangelo, B. Slater, C. Londono, B. Xu, and A. P. McGuigan, “Modulation of cellular polarization and migration by ephrin/eph signal-mediated boundary formation,” Integrative biology (united kingdom), vol. 9, iss. 12, pp. 934-946, 2017.
    [Bibtex]
    @article{RN1096_2017,
    author = {Javaherian, S. and D'Arcangelo, E. and Slater, B. and Londono, C. and Xu, B. and McGuigan, A. P.},
    title = {Modulation of cellular polarization and migration by ephrin/Eph signal-mediated boundary formation},
    journal = {Integrative Biology (United Kingdom)},
    volume = {9},
    number = {12},
    pages = {934-946},
    DOI = {10.1039/c7ib00176b},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85038391615&doi=10.1039%2fc7ib00176b&partnerID=40&md5=4c6ab701d84cd390b511e19d8e1aff63},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] J. C. Joo, A. N. Khusnutdinova, R. Flick, T. Kim, U. T. Bornscheuer, A. F. Yakunin, and R. Mahadevan, “Alkene hydrogenation activity of enoate reductases for an environmentally benign biosynthesis of adipic acid,” Chemical science, vol. 8, iss. 2, pp. 1406-1413, 2017.
    [Bibtex]
    @article{RN1035_2017,
    author = {Joo, J. C. and Khusnutdinova, A. N. and Flick, R. and Kim, T. and Bornscheuer, U. T. and Yakunin, A. F. and Mahadevan, R.},
    title = {Alkene hydrogenation activity of enoate reductases for an environmentally benign biosynthesis of adipic acid},
    journal = {Chemical Science},
    volume = {8},
    number = {2},
    pages = {1406-1413},
    DOI = {10.1039/c6sc02842j},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85011060324&doi=10.1039%2fc6sc02842j&partnerID=40&md5=0c7711a1c0af3f5a6c8dd337cec21989},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] S. Kalami, M. Arefmanesh, E. Master, and M. Nejad, “Replacing 100% of phenol in phenolic adhesive formulations with lignin,” Journal of applied polymer science, 2017.
    [Bibtex]
    @article{RN1047_2017,
    author = {Kalami, S. and Arefmanesh, M. and Master, E. and Nejad, M.},
    title = {Replacing 100% of phenol in phenolic adhesive formulations with lignin},
    journal = {Journal of Applied Polymer Science},
    DOI = {10.1002/app.45124},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85017525475&doi=10.1002%2fapp.45124&partnerID=40&md5=c0e60f869bc8d704b74f16b9cd4acba0},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] Y. Khojasteh Salkuyeh, B. A. Saville, and H. L. MacLean, “Techno-economic analysis and life cycle assessment of hydrogen production from natural gas using current and emerging technologies,” International journal of hydrogen energy, 2017.
    [Bibtex]
    @article{RN1058_2017,
    author = {Khojasteh Salkuyeh, Y. and Saville, B. A. and MacLean, H. L.},
    title = {Techno-economic analysis and life cycle assessment of hydrogen production from natural gas using current and emerging technologies},
    journal = {International Journal of Hydrogen Energy},
    DOI = {10.1016/j.ijhydene.2017.05.219},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85023745004&doi=10.1016%2fj.ijhydene.2017.05.219&partnerID=40&md5=abd332d154c4d92a47e04f33ce8e5423},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] A. N. Khusnutdinova, R. Flick, A. Popovic, G. Brown, A. Tchigvintsev, B. Nocek, K. Correia, J. C. Joo, R. Mahadevan, and A. F. Yakunin, “Exploring bacterial carboxylate reductases for the reduction of bifunctional carboxylic acids,” Biotechnol j, 2017.
    [Bibtex]
    @article{RN1072_2017,
    author = {Khusnutdinova, A. N. and Flick, R. and Popovic, A. and Brown, G. and Tchigvintsev, A. and Nocek, B. and Correia, K. and Joo, J. C. and Mahadevan, R. and Yakunin, A. F.},
    title = {Exploring Bacterial Carboxylate Reductases for the Reduction of Bifunctional Carboxylic Acids},
    journal = {Biotechnol J},
    ISSN = {1860-6768},
    DOI = {10.1002/biot.201600751},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] T. Kim, R. Flick, J. Brunzelle, A. Singer, E. Evdokimova, G. Brown, J. C. Joo, G. A. Minasov, W. F. Anderson, R. Mahadevan, A. Savchenko, and A. F. Yakunin, “Novel aldo-keto reductases for the biocatalytic conversion of 3- hydroxybutanal to 1,3-butanediol: structural and biochemical studies,” Applied and environmental microbiology, vol. 83, iss. 7, 2017.
    [Bibtex]
    @article{RN1045_2017,
    author = {Kim, T. and Flick, R. and Brunzelle, J. and Singer, A. and Evdokimova, E. and Brown, G. and Joo, J. C. and Minasov, G. A. and Anderson, W. F. and Mahadevan, R. and Savchenko, A. and Yakunin, A. F.},
    title = {Novel aldo-keto reductases for the biocatalytic conversion of 3- hydroxybutanal to 1,3-butanediol: Structural and biochemical studies},
    journal = {Applied and Environmental Microbiology},
    volume = {83},
    number = {7},
    DOI = {10.1128/AEM.03172-16},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85015837417&doi=10.1128%2fAEM.03172-16&partnerID=40&md5=1b05c906802a188ac5bf99707c2a9a5a},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] S. Klamt, G. Regensburger, M. P. Gerstl, C. Jungreuthmayer, S. Schuster, R. Mahadevan, J. Zanghellini, and S. Müller, “From elementary flux modes to elementary flux vectors: metabolic pathway analysis with arbitrary linear flux constraints,” Plos computational biology, vol. 13, iss. 4, 2017.
    [Bibtex]
    @article{RN1048_2017,
    author = {Klamt, S. and Regensburger, G. and Gerstl, M. P. and Jungreuthmayer, C. and Schuster, S. and Mahadevan, R. and Zanghellini, J. and Müller, S.},
    title = {From elementary flux modes to elementary flux vectors: Metabolic pathway analysis with arbitrary linear flux constraints},
    journal = {PLoS Computational Biology},
    volume = {13},
    number = {4},
    DOI = {10.1371/journal.pcbi.1005409},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85018301681&doi=10.1371%2fjournal.pcbi.1005409&partnerID=40&md5=23f1907b22fc9c83698da66a4fab21a7},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] K. Littunen, G. Mai-Gisondi, J. Seppälä, and E. R. Master, “Enzymatically debranched xylans in graft copolymerization,” Biomacromolecules, vol. 18, iss. 5, pp. 1634-1641, 2017.
    [Bibtex]
    @article{RN1052_2017,
    author = {Littunen, K. and Mai-Gisondi, G. and Seppälä, J. and Master, E. R.},
    title = {Enzymatically debranched xylans in graft copolymerization},
    journal = {Biomacromolecules},
    volume = {18},
    number = {5},
    pages = {1634-1641},
    DOI = {10.1021/acs.biomac.7b00229},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85019101497&doi=10.1021%2facs.biomac.7b00229&partnerID=40&md5=c58e7c39aa2c496de0b3868de02be383},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] G. Mai-Gisondi, H. Maaheimo, S. L. Chong, S. Hinz, M. Tenkanen, and E. Master, “Functional comparison of versatile carbohydrate esterases from families ce1, ce6 and ce16 on acetyl-4-o-methylglucuronoxylan and acetyl-galactoglucomannan,” Biochimica et biophysica acta – general subjects, 2017.
    [Bibtex]
    @article{RN1059_2017,
    author = {Mai-Gisondi, G. and Maaheimo, H. and Chong, S. L. and Hinz, S. and Tenkanen, M. and Master, E.},
    title = {Functional comparison of versatile carbohydrate esterases from families CE1, CE6 and CE16 on acetyl-4-O-methylglucuronoxylan and acetyl-galactoglucomannan},
    journal = {Biochimica et Biophysica Acta - General Subjects},
    DOI = {10.1016/j.bbagen.2017.06.002},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85022188809&doi=10.1016%2fj.bbagen.2017.06.002&partnerID=40&md5=6c728d176dccf0f87fbf57a8e7be2de3},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] E. J. T. McGee, A. R. Sangakkara, and L. L. Diosady, “Double fortification of salt with folic acid and iodine,” Journal of food engineering, vol. 198, pp. 72-80, 2017.
    [Bibtex]
    @article{RN678_2017,
    author = {McGee, E. J. T. and Sangakkara, A. R. and Diosady, L. L.},
    title = {Double fortification of salt with folic acid and iodine},
    journal = {Journal of Food Engineering},
    volume = {198},
    pages = {72-80},
    ISSN = {02608774 (ISSN)},
    DOI = {10.1016/j.jfoodeng.2016.11.019},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] T. Meyer, X. Chen, H. N. Tran, D. G. Allen, and E. A. Edwards, “Natural freezing-thawing and its impact on dewaterability and anaerobic digestibility of biosludge,” Environmental engineering science, vol. 34, iss. 5, pp. 357-366, 2017.
    [Bibtex]
    @article{RN1056_2017,
    author = {Meyer, T. and Chen, X. and Tran, H. N. and Allen, D. G. and Edwards, E. A.},
    title = {Natural Freezing-Thawing and Its Impact on Dewaterability and Anaerobic Digestibility of Biosludge},
    journal = {Environmental Engineering Science},
    volume = {34},
    number = {5},
    pages = {357-366},
    DOI = {10.1089/ees.2016.0372},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85020724726&doi=10.1089%2fees.2016.0372&partnerID=40&md5=c88a895091d7e0b8236d624fda781333},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] A. V. Pandit, S. Srinivasan, and R. Mahadevan, “Redesigning metabolism based on orthogonality principles,” Nature communications, vol. 8, 2017.
    [Bibtex]
    @article{RN1054_2017,
    author = {Pandit, A. V. and Srinivasan, S. and Mahadevan, R.},
    title = {Redesigning metabolism based on orthogonality principles},
    journal = {Nature Communications},
    volume = {8},
    DOI = {10.1038/ncomms15188},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85020003398&doi=10.1038%2fncomms15188&partnerID=40&md5=8a164bb131a100f38f53d40f7da396b3},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] S. Partow, P. B. Hyland, and R. Mahadevan, “Synthetic rescue couples nadph generation to metabolite overproduction in saccharomyces cerevisiae,” Metab eng, vol. 43, iss. Pt A, pp. 64-70, 2017.
    [Bibtex]
    @article{RN1071_2017,
    author = {Partow, S. and Hyland, P. B. and Mahadevan, R.},
    title = {Synthetic rescue couples NADPH generation to metabolite overproduction in Saccharomyces cerevisiae},
    journal = {Metab Eng},
    volume = {43},
    number = {Pt A},
    pages = {64-70},
    ISSN = {1096-7176},
    DOI = {10.1016/j.ymben.2017.08.004},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] L. G. Pereira, H. L. Maclean, and B. A. Saville, “Financial analyses of potential biojet fuel production technologies,” Biofuels, bioproducts and biorefining, 2017.
    [Bibtex]
    @article{RN1049_2017,
    author = {Pereira, L. G. and Maclean, H. L. and Saville, B. A.},
    title = {Financial analyses of potential biojet fuel production technologies},
    journal = {Biofuels, Bioproducts and Biorefining},
    DOI = {10.1002/bbb.1775},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85018733585&doi=10.1002%2fbbb.1775&partnerID=40&md5=5e045433e416c307a4dd8783b1ef3425},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] A. Popovic, T. Hai, A. Tchigvintsev, M. Hajighasemi, B. Nocek, A. N. Khusnutdinova, G. Brown, J. Glinos, R. Flick, T. Skarina, T. N. Chernikova, V. Yim, T. Brüls, D. L. Paslier, M. M. Yakimov, A. Joachimiak, M. Ferrer, O. V. Golyshina, A. Savchenko, P. N. Golyshin, and A. F. Yakunin, “Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families,” Scientific reports, vol. 7, 2017.
    [Bibtex]
    @article{RN1041_2017,
    author = {Popovic, A. and Hai, T. and Tchigvintsev, A. and Hajighasemi, M. and Nocek, B. and Khusnutdinova, A. N. and Brown, G. and Glinos, J. and Flick, R. and Skarina, T. and Chernikova, T. N. and Yim, V. and Brüls, T. and Paslier, D. L. and Yakimov, M. M. and Joachimiak, A. and Ferrer, M. and Golyshina, O. V. and Savchenko, A. and Golyshin, P. N. and Yakunin, A. F.},
    title = {Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families},
    journal = {Scientific Reports},
    volume = {7},
    DOI = {10.1038/srep44103},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85014885135&doi=10.1038%2fsrep44103&partnerID=40&md5=ce3cd0bab4ce66d48b4294a7b610b7b8},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] A. Pratap Singh, J. Siddiqui, and L. L. Diosady, “Characterizing the ph-dependent release kinetics of food-grade spray drying encapsulated iron microcapsules for food fortification,” Food and bioprocess technology, 2017.
    [Bibtex]
    @article{RN1088_2017,
    author = {Pratap Singh, Anubhav and Siddiqui, Juveria and Diosady, Levente L.},
    title = {Characterizing the pH-Dependent Release Kinetics of Food-Grade Spray Drying Encapsulated Iron Microcapsules for Food Fortification},
    journal = {Food and Bioprocess Technology},
    ISSN = {1935-5149},
    DOI = {10.1007/s11947-017-2022-0},
    url = {https://doi.org/10.1007/s11947-017-2022-0},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] L. A. Puentes Jacome and E. A. Edwards, “A switch of chlorinated substrate causes emergence of a previously undetected native dehalobacter population in an established dehalococcoides-dominated chloroethene-dechlorinating enrichment culture,” Fems microbiol ecol, vol. 93, iss. 12, 2017.
    [Bibtex]
    @article{RN1082_2017,
    author = {Puentes Jacome, L. A. and Edwards, E. A.},
    title = {A switch of chlorinated substrate causes emergence of a previously undetected native Dehalobacter population in an established Dehalococcoides-dominated chloroethene-dechlorinating enrichment culture},
    journal = {FEMS Microbiol Ecol},
    volume = {93},
    number = {12},
    ISSN = {0168-6496},
    DOI = {10.1093/femsec/fix141},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] W. Qiao, F. Luo, L. Lomheim, E. E. Mack, S. Ye, J. Wu, and E. A. Edwards, “Natural attenuation and anaerobic benzene detoxification processes at a chlorobenzene-contaminated industrial site inferred from field investigations and microcosm studies,” Environmental science & technology, 2017.
    [Bibtex]
    @article{RN1087_2017,
    author = {Qiao, Wenjing and Luo, Fei and Lomheim, Line and Mack, Elizabeth Erin and Ye, Shujun and Wu, Jichun and Edwards, Elizabeth A.},
    title = {Natural attenuation and anaerobic benzene detoxification processes at a chlorobenzene-contaminated industrial site inferred from field investigations and microcosm studies},
    journal = {Environmental Science & Technology},
    ISSN = {0013-936X},
    DOI = {10.1021/acs.est.7b04145},
    url = {http://dx.doi.org/10.1021/acs.est.7b04145},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] V. Sarv, O. Trass, and L. L. Diosady, “Preparation and characterization of camelina sativa protein isolates and mucilage,” Jaocs, journal of the american oil chemists’ society, pp. 1-7, 2017.
    [Bibtex]
    @article{RN1065_2017,
    author = {Sarv, V. and Trass, O. and Diosady, L. L.},
    title = {Preparation and Characterization of Camelina sativa Protein Isolates and Mucilage},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    pages = {1-7},
    DOI = {10.1007/s11746-017-3031-x},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85028767526&doi=10.1007%2fs11746-017-3031-x&partnerID=40&md5=6fa8498cd50e5b3ddc83647a6ba6c56f},
    year = {2017},
    type = {Journal Article}
    }
  • S. Sinichi, D. G. B. Boocock, and L. L. Diosady, “Mixed alcohol transesterification of mustard oil,” International news on fats, oils and related materials, vol. 28, iss. 10, pp. 16-18, 2017.
    [Bibtex]
    @article{RN1099_2017,
    author = {Sinichi, S. and Boocock, D. G. B. and Diosady, L. L.},
    title = {Mixed alcohol transesterification of mustard oil},
    journal = {International News on Fats, Oils and Related Materials},
    volume = {28},
    number = {10},
    pages = {16-18},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85040915861&partnerID=40&md5=7bc12eb6ac658953446aab3b0e4776a8},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] S. Sinichi, D. G. B. Boocock, and L. L. Diosady, “Production of isopropyl and methyl esters from yellow mustard oil/ipa miscellas,” Jaocs, journal of the american oil chemists’ society, pp. 1-11, 2017.
    [Bibtex]
    @article{RN1032_2017,
    author = {Sinichi, S. and Boocock, D. G. B. and Diosady, L. L.},
    title = {Production of isopropyl and methyl esters from yellow mustard oil/IPA miscellas},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    pages = {1-11},
    ISSN = {0003021X (ISSN)},
    DOI = {10.1007/s11746-016-2942-2},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85009284537&doi=10.1007%2fs11746-016-2942-2&partnerID=40&md5=4d023b82c8a754e2ae5f8d573ab1ee2f},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] J. Telling, K. Voglesonger, C. N. Sutcliffe, G. Lacrampe-Couloume, E. Edwards, and B. Sherwood Lollar, “Bioenergetic constraints on microbial hydrogen utilization in precambrian deep crustal fracture fluids,” Geomicrobiology journal, pp. 1-12, 2017.
    [Bibtex]
    @article{RN1063_2017,
    author = {Telling, J. and Voglesonger, K. and Sutcliffe, C. N. and Lacrampe-Couloume, G. and Edwards, E. and Sherwood Lollar, B.},
    title = {Bioenergetic Constraints on Microbial Hydrogen Utilization in Precambrian Deep Crustal Fracture Fluids},
    journal = {Geomicrobiology Journal},
    pages = {1-12},
    DOI = {10.1080/01490451.2017.1333176},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85026353286&doi=10.1080%2f01490451.2017.1333176&partnerID=40&md5=8fea324e7c995f30943a48df96cb3a1f},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] A. Y. L. Tsai, K. Chan, C. Y. Ho, T. Canam, R. Capron, E. R. Master, and K. Bräutigam, “Transgenic expression of fungal accessory hemicellulases in arabidopsis thaliana triggers transcriptional patterns related to biotic stress and defense response,” Plos one, vol. 12, iss. 3, 2017.
    [Bibtex]
    @article{RN1040_2017,
    author = {Tsai, A. Y. L. and Chan, K. and Ho, C. Y. and Canam, T. and Capron, R. and Master, E. R. and Bräutigam, K.},
    title = {Transgenic expression of fungal accessory hemicellulases in Arabidopsis thaliana triggers transcriptional patterns related to biotic stress and defense response},
    journal = {PLoS ONE},
    volume = {12},
    number = {3},
    DOI = {10.1371/journal.pone.0173094},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85014357411&doi=10.1371%2fjournal.pone.0173094&partnerID=40&md5=dd2fd573322a40a7bc3898dcd6e04148},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] T. V. Vuong, B. Liu, M. Sandgren, and E. R. Master, “Microplate-based detection of lytic polysaccharide monooxygenase activity by fluorescence-labeling of insoluble oxidized products,” Biomacromolecules, vol. 18, iss. 2, pp. 610-616, 2017.
    [Bibtex]
    @article{RN1037_2017,
    author = {Vuong, T. V. and Liu, B. and Sandgren, M. and Master, E. R.},
    title = {Microplate-based detection of lytic polysaccharide monooxygenase activity by fluorescence-labeling of insoluble oxidized products},
    journal = {Biomacromolecules},
    volume = {18},
    number = {2},
    pages = {610-616},
    DOI = {10.1021/acs.biomac.6b01790},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85012247679&doi=10.1021%2facs.biomac.6b01790&partnerID=40&md5=d05310138517c6aa2d70b9651db1e122},
    year = {2017},
    type = {Journal Article}
    }
  • M. T. Wong, W. Wang, M. Couturier, F. M. Razeq, V. Lombard, P. Lapebie, E. A. Edwards, N. Terrapon, B. Henrissat, and E. Master, “Comparative metagenomics of cellulose-and poplar hydrolysate-degrading microbial enrichments from gut microflora of the canadian beaver (castor canadensis) and north american moose (alces americanus) after long term enrichment,” Frontiers in microbiology, vol. 8, p. 2504, 2017.
    [Bibtex]
    @article{RN1094_2017,
    author = {Wong, Mabel T and Wang, Weijun and Couturier, Marie and Razeq, Fakhria M and Lombard, Vincent and Lapebie, Pascal and Edwards, Elizabeth A and Terrapon, Nicolas and Henrissat, Bernard and Master, Emma},
    title = {Comparative metagenomics of cellulose-and poplar hydrolysate-degrading microbial enrichments from gut microflora of the Canadian beaver (Castor canadensis) and North American moose (Alces americanus) after long term enrichment},
    journal = {Frontiers in Microbiology},
    volume = {8},
    pages = {2504},
    ISSN = {1664-302X},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] M. Woolman, A. Tata, D. Dara, J. Meens, E. D’Arcangelo, C. J. Perez, S. Saiyara Prova, E. Bluemke, H. J. Ginsberg, D. Ifa, A. McGuigan, L. Ailles, and A. Zarrine-Afsar, “Rapid determination of the tumour stroma ratio in squamous cell carcinomas with desorption electrospray ionization mass spectrometry (desi-ms): a proof-of-concept demonstration,” Analyst, vol. 142, iss. 17, pp. 3250-3260, 2017.
    [Bibtex]
    @article{RN1064_2017,
    author = {Woolman, M. and Tata, A. and Dara, D. and Meens, J. and D'Arcangelo, E. and Perez, C. J. and Saiyara Prova, S. and Bluemke, E. and Ginsberg, H. J. and Ifa, D. and McGuigan, A. and Ailles, L. and Zarrine-Afsar, A.},
    title = {Rapid determination of the tumour stroma ratio in squamous cell carcinomas with desorption electrospray ionization mass spectrometry (DESI-MS): A proof-of-concept demonstration},
    journal = {Analyst},
    volume = {142},
    number = {17},
    pages = {3250-3260},
    DOI = {10.1039/c7an00830a},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85027960561&doi=10.1039%2fc7an00830a&partnerID=40&md5=2f2e3317a1712057137e25df42d1bff1},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] J. Yan, M. Bi, A. K. Bourdon, A. T. Farmer, P. Wang, O. Molenda, A. T. Quaile, N. Jiang, Y. Yang, Y. Yin, B. Şimşir, S. R. Campagna, E. A. Edwards, and F. E. Löffler, “Purinyl-cobamide is a native prosthetic group of reductive dehalogenases,” Nature chemical biology, 2017.
    [Bibtex]
    @article{RN1085_2017,
    author = {Yan, Jun and Bi, Meng and Bourdon, Allen K. and Farmer, Abigail T. and Wang, Po-Hsiang and Molenda, Olivia and Quaile, Andrew T. and Jiang, Nannan and Yang, Yi and Yin, Yongchao and Şimşir, Burcu and Campagna, Shawn R. and Edwards, Elizabeth A. and Löffler, Frank E.},
    title = {Purinyl-cobamide is a native prosthetic group of reductive dehalogenases},
    journal = {Nature Chemical Biology},
    DOI = {10.1038/nchembio.2512
    https://www.nature.com/articles/nchembio.2512#supplementary-information},
    url = {http://dx.doi.org/10.1038/nchembio.2512
    https://www.nature.com/articles/nchembio.2512.pdf},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] R. Yan, T. V. Vuong, W. Wang, and E. R. Master, “Action of a gh115 α-glucuronidase from amphibacillus xylanus at alkaline condition promotes release of 4-o-methylglucopyranosyluronic acid from glucuronoxylan and arabinoglucuronoxylan,” Enzyme and microbial technology, vol. 104, pp. 22-28, 2017.
    [Bibtex]
    @article{RN1053_2017,
    author = {Yan, R. and Vuong, T. V. and Wang, W. and Master, E. R.},
    title = {Action of a GH115 α-glucuronidase from Amphibacillus xylanus at alkaline condition promotes release of 4-O-methylglucopyranosyluronic acid from glucuronoxylan and arabinoglucuronoxylan},
    journal = {Enzyme and Microbial Technology},
    volume = {104},
    pages = {22-28},
    DOI = {10.1016/j.enzmictec.2017.05.004},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85020239787&doi=10.1016%2fj.enzmictec.2017.05.004&partnerID=40&md5=bc5a727efac1dc07b6eeb9c18e369026},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] W. Zhai, M. T. Wong, F. Luo, M. Z. Hashmi, X. Liu, E. A. Edwards, X. Tang, and J. Xu, “Arsenic methylation and its relationship to abundance and diversity of arsm genes in composting manure,” Scientific reports, vol. 7, 2017.
    [Bibtex]
    @article{RN1042_2017,
    author = {Zhai, W. and Wong, M. T. and Luo, F. and Hashmi, M. Z. and Liu, X. and Edwards, E. A. and Tang, X. and Xu, J.},
    title = {Arsenic methylation and its relationship to abundance and diversity of arsM genes in composting manure},
    journal = {Scientific Reports},
    volume = {7},
    DOI = {10.1038/srep42198},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85014910700&doi=10.1038%2fsrep42198&partnerID=40&md5=d6028cbe3f904dbb798a4d0137b8f2f4},
    year = {2017},
    type = {Journal Article}
    }

2016

  • [DOI] S. Bonilla T and D. G. Allen, “Flocculation with lysozyme: a non-enzymatic application,” Canadian journal of chemical engineering, vol. 94, iss. 2, pp. 231-237, 2016.
    [Bibtex]
    @article{RN518_2016,
    author = {Bonilla T, S. and Allen, D. G.},
    title = {Flocculation with lysozyme: A Non-Enzymatic Application},
    journal = {Canadian Journal of Chemical Engineering},
    volume = {94},
    number = {2},
    pages = {231-237},
    ISSN = {00084034 (ISSN)},
    DOI = {10.1002/cjce.22386},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84955326890&doi=10.1002%2fcjce.22386&partnerID=40&md5=cbbc0d262227b6e52099f8b3fbf20713},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] S. Chen, C. E. White, G. C. diCenzo, Y. Zhang, P. J. Stogios, A. Savchenko, and T. M. Finan, “L-hydroxyproline and d-proline catabolism in sinorhizobium meliloti,” Journal of bacteriology, vol. 198, iss. 7, pp. 1171-1181, 2016.
    [Bibtex]
    @article{RN896_2016,
    author = {Chen, S. and White, C. E. and diCenzo, G. C. and Zhang, Y. and Stogios, P. J. and Savchenko, A. and Finan, T. M.},
    title = {L-Hydroxyproline and D-proline catabolism in Sinorhizobium meliloti},
    journal = {Journal of Bacteriology},
    volume = {198},
    number = {7},
    pages = {1171-1181},
    ISSN = {00219193 (ISSN)},
    DOI = {10.1128/JB.00961-15},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84961171343&doi=10.1128%2fJB.00961-15&partnerID=40&md5=e01479cac58d80407cb7f307eeca86bd},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] P. L. Chu, C. Vanderghem, H. L. MacLean, and B. A. Saville, “Financial analysis and risk assessment of hydroprocessed renewable jet fuel production from camelina, carinata and used cooking oil,” Applied energy, vol. 198, pp. 401-409, 2016.
    [Bibtex]
    @article{RN632_2016,
    author = {Chu, P. L. and Vanderghem, C. and MacLean, H. L. and Saville, B. A.},
    title = {Financial analysis and risk assessment of hydroprocessed renewable jet fuel production from camelina, carinata and used cooking oil},
    journal = {Applied Energy},
    volume = {198},
    pages = {401-409},
    ISSN = {03062619 (ISSN)},
    DOI = {10.1016/j.apenergy.2016.12.001},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85008146710&doi=10.1016%2fj.apenergy.2016.12.001&partnerID=40&md5=9723d610b3a44141c120951127dca211},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] V. Dueik and L. L. Diosady, “Microencapsulation of iron in a reversed enteric coating using spray drying technology for double fortification of salt with iodine and iron,” Journal of food process engineering, vol. 40, iss. 2, 2016.
    [Bibtex]
    @article{RN680_2016,
    author = {Dueik, V. and Diosady, L. L.},
    title = {Microencapsulation of iron in a reversed enteric coating using spray drying technology for double fortification of salt with iodine and iron},
    journal = {Journal of Food Process Engineering},
    volume = {40},
    number = {2},
    ISSN = {01458876 (ISSN)},
    DOI = {10.1111/jfpe.12376},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84960333782&doi=10.1111%2fjfpe.12376&partnerID=40&md5=adbd7d7e65a4c6660c6ead74c8df15cc},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] C. K. Euler and R. Mahadevan, “Protein-level control of metabolism: design principles and prospects from a representative system,” Ifac-papersonline, vol. 49, iss. 26, pp. 165-170, 2016.
    [Bibtex]
    @article{RN382_2016,
    author = {Euler, C. K. and Mahadevan, R.},
    title = {Protein-level control of metabolism: Design principles and prospects from a representative system},
    journal = {IFAC-PapersOnLine},
    volume = {49},
    number = {26},
    pages = {165-170},
    ISSN = {24058963 (ISSN)},
    DOI = {10.1016/j.ifacol.2016.12.120},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85008395826&doi=10.1016%2fj.ifacol.2016.12.120&partnerID=40&md5=30d84762229cfa11831d57cd43ef28c7},
    year = {2016},
    type = {Journal Article}
    }
  • T. M. Fitamo, O. Dahl, E. Master, and T. Meyer, “Biochemical methane potential of kraft bleaching effluent and codigestion with other in-mill streams,” Tappi journal, vol. 15, iss. 2, pp. 80-88, 2016.
    [Bibtex]
    @article{RN321_2016,
    author = {Fitamo, T. M. and Dahl, O. and Master, E. and Meyer, T.},
    title = {Biochemical methane potential of kraft bleaching effluent and codigestion with other in-mill streams},
    journal = {Tappi Journal},
    volume = {15},
    number = {2},
    pages = {80-88},
    ISSN = {07341415 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84960840201&partnerID=40&md5=7180d2814c99564dc4b49380033f0378},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] A. Gagarinova, G. Stewart, B. Samanfar, S. Phanse, C. A. White, H. Aoki, V. Deineko, N. Beloglazova, A. F. Yakunin, A. Golshani, E. D. Brown, M. Babu, and A. Emili, “Systematic genetic screens reveal the dynamic global functional organization of the bacterial translation machinery,” Cell reports, vol. 17, iss. 3, pp. 904-916, 2016.
    [Bibtex]
    @article{RN775_2016,
    author = {Gagarinova, A. and Stewart, G. and Samanfar, B. and Phanse, S. and White, C. A. and Aoki, H. and Deineko, V. and Beloglazova, N. and Yakunin, A. F. and Golshani, A. and Brown, E. D. and Babu, M. and Emili, A.},
    title = {Systematic genetic screens reveal the dynamic global functional organization of the bacterial translation machinery},
    journal = {Cell Reports},
    volume = {17},
    number = {3},
    pages = {904-916},
    ISSN = {22111247 (ISSN)},
    DOI = {10.1016/j.celrep.2016.09.040},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84992176751&doi=10.1016%2fj.celrep.2016.09.040&partnerID=40&md5=6a28baa6a82ee7c211b0a62317e98767},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] K. Gerbrandt, P. L. Chu, A. Simmonds, K. A. Mullins, H. L. MacLean, W. M. Griffin, and B. A. Saville, “Life cycle assessment of lignocellulosic ethanol: a review of key factors and methods affecting calculated ghg emissions and energy use,” Current opinion in biotechnology, vol. 38, pp. 63-70, 2016.
    [Bibtex]
    @article{RN635_2016,
    author = {Gerbrandt, K. and Chu, P. L. and Simmonds, A. and Mullins, K. A. and MacLean, H. L. and Griffin, W. M. and Saville, B. A.},
    title = {Life cycle assessment of lignocellulosic ethanol: A review of key factors and methods affecting calculated GHG emissions and energy use},
    journal = {Current Opinion in Biotechnology},
    volume = {38},
    pages = {63-70},
    ISSN = {09581669 (ISSN)},
    DOI = {10.1016/j.copbio.2015.12.021},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84955117470&doi=10.1016%2fj.copbio.2015.12.021&partnerID=40&md5=10e5422ec95d5488edce29c4a9390e53},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] W. M. Griffin, B. A. Saville, and H. L. MacLean, “Ethanol use in the united states: status, threats and the potential future,” in Global bioethanol: evolution, risks, and uncertainties, Elsevier Inc., 2016, pp. 34-62.
    [Bibtex]
    @incollection{RN634,
    author = {Griffin, W. M. and Saville, B. A. and MacLean, H. L.},
    title = {Ethanol use in the United States: Status, threats and the potential future},
    booktitle = {Global Bioethanol: Evolution, Risks, and Uncertainties},
    publisher = {Elsevier Inc.},
    pages = {34-62},
    ISBN = {9780128031568 (ISBN); 9780128031414 (ISBN)},
    DOI = {10.1016/B978-0-12-803141-4.00002-2},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84987792349&doi=10.1016%2fB978-0-12-803141-4.00002-2&partnerID=40&md5=2565816b48eb823b6048830664013718},
    year = {2016},
    type = {Book Section}
    }
  • [DOI] M. Hajighasemi, B. P. Nocek, A. Tchigvintsev, G. Brown, R. Flick, X. Xu, H. Cui, T. Hai, A. Joachimiak, P. N. Golyshin, A. Savchenko, E. A. Edwards, and A. F. Yakunin, “Biochemical and structural insights into enzymatic depolymerization of polylactic acid and other polyesters by microbial carboxylesterases,” Biomacromolecules, vol. 17, iss. 6, pp. 2027-2039, 2016.
    [Bibtex]
    @article{RN194_2016,
    author = {Hajighasemi, M. and Nocek, B. P. and Tchigvintsev, A. and Brown, G. and Flick, R. and Xu, X. and Cui, H. and Hai, T. and Joachimiak, A. and Golyshin, P. N. and Savchenko, A. and Edwards, E. A. and Yakunin, A. F.},
    title = {Biochemical and structural insights into enzymatic depolymerization of polylactic acid and other polyesters by microbial carboxylesterases},
    journal = {Biomacromolecules},
    volume = {17},
    number = {6},
    pages = {2027-2039},
    ISSN = {15257797 (ISSN)},
    DOI = {10.1021/acs.biomac.6b00223},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84974851169&doi=10.1021%2facs.biomac.6b00223&partnerID=40&md5=818b16453c413e81f50eaa38c7d9d374},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] L. Huang, A. Khusnutdinova, B. Nocek, G. Brown, X. Xu, H. Cui, P. Petit, R. Flick, R. Zallot, K. Balmant, M. J. Ziemak, J. Shanklin, V. De Crécy-Lagard, O. Fiehn, J. F. Gregory, A. Joachimiak, A. Savchenko, A. F. Yakunin, and A. D. Hanson, “A family of metal-dependent phosphatases implicated in metabolite damage-control,” Nature chemical biology, vol. 12, iss. 8, pp. 621-627, 2016.
    [Bibtex]
    @article{RN777_2016,
    author = {Huang, L. and Khusnutdinova, A. and Nocek, B. and Brown, G. and Xu, X. and Cui, H. and Petit, P. and Flick, R. and Zallot, R. and Balmant, K. and Ziemak, M. J. and Shanklin, J. and De Crécy-Lagard, V. and Fiehn, O. and Gregory, J. F. and Joachimiak, A. and Savchenko, A. and Yakunin, A. F. and Hanson, A. D.},
    title = {A family of metal-dependent phosphatases implicated in metabolite damage-control},
    journal = {Nature Chemical Biology},
    volume = {12},
    number = {8},
    pages = {621-627},
    ISSN = {15524450 (ISSN)},
    DOI = {10.1038/nchembio.2108},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84975290954&doi=10.1038%2fnchembio.2108&partnerID=40&md5=55cfdd39c3b6dd9637ace45743810772},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] M. A. Islam, A. Tchigvintsev, V. Yim, A. Savchenko, A. F. Yakunin, R. Mahadevan, and E. A. Edwards, “Experimental validation of in silico model-predicted isocitrate dehydrogenase and phosphomannose isomerase from dehalococcoides mccartyi,” Microbial biotechnology, vol. 9, iss. 1, pp. 47-60, 2016.
    [Bibtex]
    @article{RN199_2016,
    author = {Islam, M. A. and Tchigvintsev, A. and Yim, V. and Savchenko, A. and Yakunin, A. F. and Mahadevan, R. and Edwards, E. A.},
    title = {Experimental validation of in silico model-predicted isocitrate dehydrogenase and phosphomannose isomerase from Dehalococcoides mccartyi},
    journal = {Microbial Biotechnology},
    volume = {9},
    number = {1},
    pages = {47-60},
    ISSN = {17517907 (ISSN)},
    DOI = {10.1111/1751-7915.12315},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84953351425&doi=10.1111%2f1751-7915.12315&partnerID=40&md5=3284b273515f3325c2f7a1919bbcb41f},
    year = {2016},
    type = {Journal Article}
    }
  • M. Khaksar Toroghi, W. R. Cluett, and K. Mahadevan, “Multi-scale metabolic modelling approach for predicting blood alcohol concentration,” Ieee life sciences letters, vol. 2, iss. 4, pp. 59-62, 2016.
    [Bibtex]
    @article{RN1060_2016,
    author = {Khaksar Toroghi, Masood and Cluett, W. R. and Mahadevan, K.},
    title = {Multi-scale metabolic modelling approach for predicting blood alcohol concentration},
    journal = {IEEE Life Sciences Letters},
    volume = {2},
    number = {4},
    pages = {59-62},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] C. M. D. Kocur, L. Lomheim, O. Molenda, K. P. Weber, L. M. Austrins, B. E. Sleep, H. K. Boparai, E. A. Edwards, and D. M. O’Carroll, “Long-term field study of microbial community and dechlorinating activity following carboxymethyl cellulose-stabilized nanoscale zero-valent iron injection,” Environmental science and technology, vol. 50, iss. 14, pp. 7658-7670, 2016.
    [Bibtex]
    @article{RN193_2016,
    author = {Kocur, C. M. D. and Lomheim, L. and Molenda, O. and Weber, K. P. and Austrins, L. M. and Sleep, B. E. and Boparai, H. K. and Edwards, E. A. and O'Carroll, D. M.},
    title = {Long-term field study of microbial community and dechlorinating activity following carboxymethyl cellulose-stabilized nanoscale zero-valent iron injection},
    journal = {Environmental Science and Technology},
    volume = {50},
    number = {14},
    pages = {7658-7670},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/acs.est.6b01745},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84978886843&doi=10.1021%2facs.est.6b01745&partnerID=40&md5=f577fcc1e8dfd797cf942492e0f46a21},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] A. Kumar, N. Beloglazova, C. Bundalovic-Torma, S. Phanse, V. Deineko, A. Gagarinova, G. Musso, J. Vlasblom, S. Lemak, M. Hooshyar, Z. Minic, O. Wagih, R. Mosca, P. Aloy, A. Golshani, J. Parkinson, A. Emili, A. F. Yakunin, and M. Babu, “Conditional epistatic interaction maps reveal global functional rewiring of genome integrity pathways in escherichia coli,” Cell reports, vol. 14, iss. 3, pp. 648-661, 2016.
    [Bibtex]
    @article{RN779_2016,
    author = {Kumar, A. and Beloglazova, N. and Bundalovic-Torma, C. and Phanse, S. and Deineko, V. and Gagarinova, A. and Musso, G. and Vlasblom, J. and Lemak, S. and Hooshyar, M. and Minic, Z. and Wagih, O. and Mosca, R. and Aloy, P. and Golshani, A. and Parkinson, J. and Emili, A. and Yakunin, A. F. and Babu, M.},
    title = {Conditional epistatic interaction maps reveal global functional rewiring of genome integrity pathways in Escherichia coli},
    journal = {Cell Reports},
    volume = {14},
    number = {3},
    pages = {648-661},
    ISSN = {22111247 (ISSN)},
    DOI = {10.1016/j.celrep.2015.12.060},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84953449542&doi=10.1016%2fj.celrep.2015.12.060&partnerID=40&md5=7a9a3efd000187d266144706e0f134ae},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] J. M. Luk, B. A. Saville, and H. L. MacLean, “Impact of non-petroleum vehicle fuel economy on ghg mitigation potential,” Environmental research letters, vol. 11, iss. 4, 2016.
    [Bibtex]
    @article{RN636_2016,
    author = {Luk, J. M. and Saville, B. A. and MacLean, H. L.},
    title = {Impact of non-petroleum vehicle fuel economy on GHG mitigation potential},
    journal = {Environmental Research Letters},
    volume = {11},
    number = {4},
    ISSN = {17489318 (ISSN)},
    DOI = {10.1088/1748-9326/11/4/044001},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] J. M. Luk, B. A. Saville, and H. L. MacLean, “Vehicle attribute trade-offs to meet the 2025 cafe fuel economy target,” Transportation research part d: transport and environment, vol. 49, pp. 154-171, 2016.
    [Bibtex]
    @article{RN630_2016,
    author = {Luk, J. M. and Saville, B. A. and MacLean, H. L.},
    title = {Vehicle attribute trade-offs to meet the 2025 CAFE fuel economy target},
    journal = {Transportation Research Part D: Transport and Environment},
    volume = {49},
    pages = {154-171},
    ISSN = {13619209 (ISSN)},
    DOI = {10.1016/j.trd.2016.09.005
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84988602866&doi=10.1016%2fj.trd.2016.09.005&partnerID=40&md5=161dd1e6f5bf8d97af53bb82e7bb6430},
    year = {2016},
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  • [DOI] F. Luo, C. E. Devine, and E. A. Edwards, “Cultivating microbial dark matter in benzene-degrading methanogenic consortia,” Environmental microbiology, vol. 18, iss. 9, pp. 2923-2936, 2016.
    [Bibtex]
    @article{RN192_2016,
    author = {Luo, F. and Devine, C. E. and Edwards, E. A.},
    title = {Cultivating microbial dark matter in benzene-degrading methanogenic consortia},
    journal = {Environmental Microbiology},
    volume = {18},
    number = {9},
    pages = {2923-2936},
    ISSN = {14622912 (ISSN)},
    DOI = {10.1111/1462-2920.13121},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84987624172&doi=10.1111%2f1462-2920.13121&partnerID=40&md5=9bb03a0c4299b12a601c9a69298ebc13},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] J. MacDonald, R. E. Goacher, M. Abou-Zaid, and E. R. Master, “Comparative analysis of lignin peroxidase and manganese peroxidase activity on coniferous and deciduous wood using tof-sims,” Applied microbiology and biotechnology, vol. 100, iss. 18, pp. 8013-8020, 2016.
    [Bibtex]
    @article{RN319_2016,
    author = {MacDonald, J. and Goacher, R. E. and Abou-Zaid, M. and Master, E. R.},
    title = {Comparative analysis of lignin peroxidase and manganese peroxidase activity on coniferous and deciduous wood using ToF-SIMS},
    journal = {Applied Microbiology and Biotechnology},
    volume = {100},
    number = {18},
    pages = {8013-8020},
    ISSN = {01757598 (ISSN)},
    DOI = {10.1007/s00253-016-7560-2},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84965013562&doi=10.1007%2fs00253-016-7560-2&partnerID=40&md5=6fa6b18f9cb7a531e54a9c1c9530f3a2},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] K. Mayer-Blackwell, M. Fincker, O. Molenda, B. Callahan, H. Sewell, S. Holmes, E. A. Edwards, and A. M. Spormann, “1,2-dichloroethane exposure alters the population structure, metabolism, and kinetics of a trichloroethene-dechlorinating dehalococcoides mccartyi consortium,” Environmental science and technology, vol. 50, iss. 22, pp. 12187-12196, 2016.
    [Bibtex]
    @article{RN190_2016,
    author = {Mayer-Blackwell, K. and Fincker, M. and Molenda, O. and Callahan, B. and Sewell, H. and Holmes, S. and Edwards, E. A. and Spormann, A. M.},
    title = {1,2-Dichloroethane exposure alters the population structure, metabolism, and kinetics of a trichloroethene-dechlorinating Dehalococcoides mccartyi consortium},
    journal = {Environmental Science and Technology},
    volume = {50},
    number = {22},
    pages = {12187-12196},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/acs.est.6b02957},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84995677715&doi=10.1021%2facs.est.6b02957&partnerID=40&md5=e2a969ede3d81407c978c5d632eacb0d},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] N. McGregor, M. Morar, T. H. Fenger, P. Stogios, N. Lenfant, V. Yin, X. Xu, E. Evdokimova, H. Cui, B. Henrissat, A. Savchenko, and H. Brumer, “Structure-function analysis of a mixed-linkage β-glucanase/xyloglucanase from the key ruminal bacteroidetes prevotella bryantii b14,” Journal of biological chemistry, vol. 291, iss. 3, pp. 1175-1197, 2016.
    [Bibtex]
    @article{RN894_2016,
    author = {McGregor, N. and Morar, M. and Fenger, T. H. and Stogios, P. and Lenfant, N. and Yin, V. and Xu, X. and Evdokimova, E. and Cui, H. and Henrissat, B. and Savchenko, A. and Brumer, H.},
    title = {Structure-function analysis of a mixed-linkage β-glucanase/xyloglucanase from the key ruminal bacteroidetes Prevotella bryantii B14},
    journal = {Journal of Biological Chemistry},
    volume = {291},
    number = {3},
    pages = {1175-1197},
    ISSN = {00219258 (ISSN)},
    DOI = {10.1074/jbc.M115.691659},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84954500354&doi=10.1074%2fjbc.M115.691659&partnerID=40&md5=8931356a5e50e61190a9cded61c97537},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] J. McKechnie, B. Saville, and H. L. MacLean, “Steam-treated wood pellets: environmental and financial implications relative to fossil fuels and conventional pellets for electricity generation,” Applied energy, vol. 180, pp. 637-649, 2016.
    [Bibtex]
    @article{RN631_2016,
    author = {McKechnie, J. and Saville, B. and MacLean, H. L.},
    title = {Steam-treated wood pellets: Environmental and financial implications relative to fossil fuels and conventional pellets for electricity generation},
    journal = {Applied Energy},
    volume = {180},
    pages = {637-649},
    ISSN = {03062619 (ISSN)},
    DOI = {10.1016/j.apenergy.2016.08.024},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] T. Meyer, M. I. Yang, H. N. Tran, D. G. Allen, and E. A. Edwards, “Impact of resin and fatty acids on full-scale anaerobic treatment of pulp and paper mill effluents,” Environmental engineering science, vol. 33, iss. 6, pp. 394-403, 2016.
    [Bibtex]
    @article{RN195_2016,
    author = {Meyer, T. and Yang, M. I. and Tran, H. N. and Allen, D. G. and Edwards, E. A.},
    title = {Impact of resin and fatty acids on full-scale anaerobic treatment of pulp and paper mill effluents},
    journal = {Environmental Engineering Science},
    volume = {33},
    number = {6},
    pages = {394-403},
    ISSN = {10928758 (ISSN)},
    DOI = {10.1089/ees.2015.0395},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84977137261&doi=10.1089%2fees.2015.0395&partnerID=40&md5=34330a9f19b27be2bfea7e7165b71a5e},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] M. Mimura, R. Zallot, T. D. Niehaus, G. Hasnain, S. K. Gidda, T. N. D. Nguyen, E. M. Anderson, R. T. Mullen, G. Brown, A. F. Yakunin, V. de Crécy-Lagard, I. Gregory J. F., D. R. McCarty, and A. D. Hanson, “Arabidopsis th2 encodes the orphan enzyme thiamin monophosphate phosphatase,” Plant cell, vol. 28, iss. 10, pp. 2683-2696, 2016.
    [Bibtex]
    @article{RN776_2016,
    author = {Mimura, M. and Zallot, R. and Niehaus, T. D. and Hasnain, G. and Gidda, S. K. and Nguyen, T. N. D. and Anderson, E. M. and Mullen, R. T. and Brown, G. and Yakunin, A. F. and de Crécy-Lagard, V. and Gregory, J. F., III and McCarty, D. R. and Hanson, A. D.},
    title = {Arabidopsis TH2 encodes the orphan enzyme thiamin monophosphate phosphatase},
    journal = {Plant Cell},
    volume = {28},
    number = {10},
    pages = {2683-2696},
    ISSN = {10404651 (ISSN)},
    DOI = {10.1105/tpc.16.00600},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84995366756&doi=10.1105%2ftpc.16.00600&partnerID=40&md5=bfdcc100c11480c5a76b501601ccfb17},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] O. Molenda, A. T. Quaile, and E. A. Edwards, “Dehalogenimonas sp. strain wbc-2 genome and identification of its trans-dichloroethene reductive dehalogenase, tdra,” Applied and environmental microbiology, vol. 82, iss. 1, pp. 40-50, 2016.
    [Bibtex]
    @article{RN197_2016,
    author = {Molenda, O. and Quaile, A. T. and Edwards, E. A.},
    title = {Dehalogenimonas sp. Strain WBC-2 genome and identification of its trans-dichloroethene reductive dehalogenase, TdrA},
    journal = {Applied and Environmental Microbiology},
    volume = {82},
    number = {1},
    pages = {40-50},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.02017-15},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84953911490&doi=10.1128%2fAEM.02017-15&partnerID=40&md5=2d9103927be6a8b3404689925aa2abb0},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] O. Molenda, S. Tang, and E. A. Edwards, “Complete genome sequence of dehalococcoides mccartyi strain wbc-2, capable of anaerobic reductive dechlorination of vinyl chloride,” Genome announcements, vol. 4, iss. 6, 2016.
    [Bibtex]
    @article{RN1034_2016,
    author = {Molenda, O. and Tang, S. and Edwards, E. A.},
    title = {Complete genome sequence of Dehalococcoides mccartyi strain WBC-2, capable of anaerobic reductive dechlorination of vinyl chloride},
    journal = {Genome Announcements},
    volume = {4},
    number = {6},
    DOI = {10.1128/genomeA.01375-16},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85010792396&doi=10.1128%2fgenomeA.01375-16&partnerID=40&md5=7439d1769c37cb59d6b8ce355a93a98f},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] F. Mollerup and E. Master, “Influence of a family 29 carbohydrate binding module on the recombinant production of galactose oxidase in pichia pastoris,” Data in brief, vol. 6, pp. 176-183, 2016.
    [Bibtex]
    @article{RN320_2016,
    author = {Mollerup, F. and Master, E.},
    title = {Influence of a family 29 carbohydrate binding module on the recombinant production of galactose oxidase in Pichia pastoris},
    journal = {Data in Brief},
    volume = {6},
    pages = {176-183},
    ISSN = {23523409 (ISSN)},
    DOI = {10.1016/j.dib.2015.11.032},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84961128260&doi=10.1016%2fj.dib.2015.11.032&partnerID=40&md5=b7700c7080a26bf3165f849f8dfd31fe},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] F. Mollerup, K. Parikka, T. V. Vuong, M. Tenkanen, and E. Master, “Influence of a family 29 carbohydrate binding module on the activity of galactose oxidase from fusarium graminearum,” Biochimica et biophysica acta – general subjects, vol. 1860, iss. 2, pp. 354-362, 2016.
    [Bibtex]
    @article{RN322_2016,
    author = {Mollerup, F. and Parikka, K. and Vuong, T. V. and Tenkanen, M. and Master, E.},
    title = {Influence of a family 29 carbohydrate binding module on the activity of galactose oxidase from Fusarium graminearum},
    journal = {Biochimica et Biophysica Acta - General Subjects},
    volume = {1860},
    number = {2},
    pages = {354-362},
    ISSN = {03044165 (ISSN)},
    DOI = {10.1016/j.bbagen.2015.10.023},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84948469936&doi=10.1016%2fj.bbagen.2015.10.023&partnerID=40&md5=2d48957a3775a856ee5a969fd2c0e885},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] A. B. Namazi, D. G. Allen, and C. Q. Jia, “Benefits of microwave heating method in production of activated carbon,” Canadian journal of chemical engineering, vol. 94, iss. 7, pp. 1262-1268, 2016.
    [Bibtex]
    @article{RN516_2016,
    author = {Namazi, A. B. and Allen, D. G. and Jia, C. Q.},
    title = {Benefits of microwave heating method in production of activated carbon},
    journal = {Canadian Journal of Chemical Engineering},
    volume = {94},
    number = {7},
    pages = {1262-1268},
    ISSN = {00084034 (ISSN)},
    DOI = {10.1002/cjce.22521},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84974731323&doi=10.1002%2fcjce.22521&partnerID=40&md5=82e0da10861ab542f7bfec7447253f24},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] H. Otani, P. J. Stogios, X. Xu, B. Nocek, S. N. Li, A. Savchenko, and L. D. Eltis, “The activity of cour, a marr family transcriptional regulator, is modulated through a novel molecular mechanism,” Nucleic acids research, vol. 44, iss. 2, pp. 595-607, 2016.
    [Bibtex]
    @article{RN893_2016,
    author = {Otani, H. and Stogios, P. J. and Xu, X. and Nocek, B. and Li, S. N. and Savchenko, A. and Eltis, L. D.},
    title = {The activity of CouR, a MarR family transcriptional regulator, is modulated through a novel molecular mechanism},
    journal = {Nucleic Acids Research},
    volume = {44},
    number = {2},
    pages = {595-607},
    ISSN = {03051048 (ISSN)},
    DOI = {10.1093/nar/gkv955},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84966356240&doi=10.1093%2fnar%2fgkv955&partnerID=40&md5=618ee99b05e41a31821dd11e7ec1df6d},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] G. T. Peniuk, P. J. Schnurr, and D. G. Allen, “Identification and quantification of suspended algae and bacteria populations using flow cytometry: applications for algae biofuel and biochemical growth systems,” Journal of applied phycology, vol. 28, iss. 1, pp. 95-104, 2016.
    [Bibtex]
    @article{RN519_2016,
    author = {Peniuk, G. T. and Schnurr, P. J. and Allen, D. G.},
    title = {Identification and quantification of suspended algae and bacteria populations using flow cytometry: applications for algae biofuel and biochemical growth systems},
    journal = {Journal of Applied Phycology},
    volume = {28},
    number = {1},
    pages = {95-104},
    ISSN = {09218971 (ISSN)},
    DOI = {10.1007/s10811-015-0569-6},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84957576283&doi=10.1007%2fs10811-015-0569-6&partnerID=40&md5=0936df4f9d47388bc6a6ff4e01483659},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] D. Rodenhizer, D. Cojocari, B. G. Wouters, and A. P. McGuigan, “Development of tracer: tissue roll for analysis of cellular environment and response,” Biofabrication, vol. 8, iss. 4, 2016.
    [Bibtex]
    @article{RN477_2016,
    author = {Rodenhizer, D. and Cojocari, D. and Wouters, B. G. and McGuigan, A. P.},
    title = {Development of TRACER: Tissue roll for analysis of cellular environment and response},
    journal = {Biofabrication},
    volume = {8},
    number = {4},
    ISSN = {17585082 (ISSN)},
    DOI = {10.1088/1758-5090/8/4/045008},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85006073846&doi=10.1088%2f1758-5090%2f8%2f4%2f045008&partnerID=40&md5=6856bfe95bfd0996dc8dc38ef5d85459},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] D. Rodenhizer, E. Gaude, D. Cojocari, R. Mahadevan, C. Frezza, B. G. Wouters, and A. P. McGuigan, “A three-dimensional engineered tumour for spatial snapshot analysis of cell metabolism and phenotype in hypoxic gradients,” Nature materials, vol. 15, iss. 2, pp. 227-234, 2016.
    [Bibtex]
    @article{RN481_2016,
    author = {Rodenhizer, D. and Gaude, E. and Cojocari, D. and Mahadevan, R. and Frezza, C. and Wouters, B. G. and McGuigan, A. P.},
    title = {A three-dimensional engineered tumour for spatial snapshot analysis of cell metabolism and phenotype in hypoxic gradients},
    journal = {Nature Materials},
    volume = {15},
    number = {2},
    pages = {227-234},
    ISSN = {14761122 (ISSN)},
    DOI = {10.1038/nmat4482},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84955478956&doi=10.1038%2fnmat4482&partnerID=40&md5=02a9995d43a7bbec51514b1463c95930},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] M. Rolando, P. Escoll, T. Nora, J. Botti, V. Boitez, C. Bedia, C. Daniels, G. Abraham, P. J. Stogios, T. Skarina, C. Christophe, D. Dervins-Ravault, C. Cazalet, H. Hilbi, T. W. T. Rupasinghe, D. Tull, M. J. McConville, S. Y. Ong, E. L. Hartland, P. Codogno, T. Levade, T. Naderer, A. Savchenko, and C. Buchrieser, “Legionella pneumophila s1p-lyase targets host sphingolipid metabolism and restrains autophagy,” Proceedings of the national academy of sciences of the united states of america, vol. 113, iss. 7, pp. 1901-1906, 2016.
    [Bibtex]
    @article{RN892_2016,
    author = {Rolando, M. and Escoll, P. and Nora, T. and Botti, J. and Boitez, V. and Bedia, C. and Daniels, C. and Abraham, G. and Stogios, P. J. and Skarina, T. and Christophe, C. and Dervins-Ravault, D. and Cazalet, C. and Hilbi, H. and Rupasinghe, T. W. T. and Tull, D. and McConville, M. J. and Ong, S. Y. and Hartland, E. L. and Codogno, P. and Levade, T. and Naderer, T. and Savchenko, A. and Buchrieser, C.},
    title = {Legionella pneumophila S1P-lyase targets host sphingolipid metabolism and restrains autophagy},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    volume = {113},
    number = {7},
    pages = {1901-1906},
    ISSN = {00278424 (ISSN)},
    DOI = {10.1073/pnas.1522067113},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84959018593&doi=10.1073%2fpnas.1522067113&partnerID=40&md5=82cc4e09f42355d30b2cd3200bb37813},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] B. A. Saville, W. M. Griffin, and H. L. MacLean, “Ethanol production technologies in the us: status and future developments,” in Global bioethanol: evolution, risks, and uncertainties, Elsevier Inc., 2016, pp. 163-180.
    [Bibtex]
    @incollection{RN633,
    author = {Saville, B. A. and Griffin, W. M. and MacLean, H. L.},
    title = {Ethanol production technologies in the US: Status and future developments},
    booktitle = {Global Bioethanol: Evolution, Risks, and Uncertainties},
    publisher = {Elsevier Inc.},
    pages = {163-180},
    ISBN = {9780128031568 (ISBN); 9780128031414 (ISBN)},
    DOI = {10.1016/B978-0-12-803141-4.00007-1},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84987792441&doi=10.1016%2fB978-0-12-803141-4.00007-1&partnerID=40&md5=b0c473dcd4c011642075159e5551fcf5},
    year = {2016},
    type = {Book Section}
    }
  • [DOI] P. J. Schnurr, G. S. Espie, and G. D. Allen, “The effect of photon flux density on algal biofilm growth and internal fatty acid concentrations,” Algal research, vol. 16, pp. 349-356, 2016.
    [Bibtex]
    @article{RN626_2016,
    author = {Schnurr, P. J. and Espie, G. S. and Allen, G. D.},
    title = {The effect of photon flux density on algal biofilm growth and internal fatty acid concentrations},
    journal = {Algal Research},
    volume = {16},
    pages = {349-356},
    ISSN = {22119264 (ISSN)},
    DOI = {10.1016/j.algal.2016.04.001},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84962786674&doi=10.1016%2fj.algal.2016.04.001&partnerID=40&md5=21368f4d0bbf41235b1feacae1150314},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] P. J. Schnurr, O. Molenda, E. Edwards, G. S. Espie, and D. G. Allen, “Improved biomass productivity in algal biofilms through synergistic interactions between photon flux density and carbon dioxide concentration,” Bioresource technology, vol. 219, pp. 72-79, 2016.
    [Bibtex]
    @article{RN191_2016,
    author = {Schnurr, P. J. and Molenda, O. and Edwards, E. and Espie, G. S. and Allen, D. G.},
    title = {Improved biomass productivity in algal biofilms through synergistic interactions between photon flux density and carbon dioxide concentration},
    journal = {Bioresource Technology},
    volume = {219},
    pages = {72-79},
    ISSN = {09608524 (ISSN)},
    DOI = {10.1016/j.biortech.2016.06.129},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84979702234&doi=10.1016%2fj.biortech.2016.06.129&partnerID=40&md5=bd242af89e41ddfa84b11d1b1b2c36d7},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] A. H. Shen, D. Howell, E. Edwards, P. Warde, A. Matthew, and J. M. Jones, “The experience of patients with early-stage testicular cancer during the transition from active treatment to follow-up surveillance,” Urologic oncology: seminars and original investigations, vol. 34, iss. 4, 2016.
    [Bibtex]
    @article{RN628_2016,
    author = {Shen, A. H. and Howell, D. and Edwards, E. and Warde, P. and Matthew, A. and Jones, J. M.},
    title = {The experience of patients with early-stage testicular cancer during the transition from active treatment to follow-up surveillance},
    journal = {Urologic Oncology: Seminars and Original Investigations},
    volume = {34},
    number = {4},
    ISSN = {10781439 (ISSN)},
    DOI = {10.1016/j.urolonc.2015.09.016},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84961213719&doi=10.1016%2fj.urolonc.2015.09.016&partnerID=40&md5=be3e10b63799780749db754bc9ccb6fe},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] P. J. Stogios, G. Cox, P. Spanogiannopoulos, M. C. Pillon, N. Waglechner, T. Skarina, K. Koteva, A. Guarné, A. Savchenko, and G. D. Wright, “Rifampin phosphotransferase is an unusual antibiotic resistance kinase,” Nature communications, vol. 7, pp. 1-12, 2016.
    [Bibtex]
    @article{RN891_2016,
    author = {Stogios, P. J. and Cox, G. and Spanogiannopoulos, P. and Pillon, M. C. and Waglechner, N. and Skarina, T. and Koteva, K. and Guarné, A. and Savchenko, A. and Wright, G. D.},
    title = {Rifampin phosphotransferase is an unusual antibiotic resistance kinase},
    journal = {Nature Communications},
    volume = {7},
    pages = {1-12},
    ISSN = {20411723 (ISSN)},
    DOI = {10.1038/ncomms11343},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84971669517&doi=10.1038%2fncomms11343&partnerID=40&md5=0bf78eb7b13829da1a27f15b43262ae9},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] S. Tabtabaei, B. Hijar, B. K. Chen, and L. L. Diosady, “Functional properties of protein isolates produced by aqueous extraction of de-hulled yellow mustard,” Journal of the american oil chemists’ society, vol. 94, iss. 1, pp. 149-160, 2016.
    [Bibtex]
    @article{RN679_2016,
    author = {Tabtabaei, S. and Hijar, B. and Chen, B. K. and Diosady, L. L.},
    title = {Functional properties of protein isolates produced by aqueous extraction of de-hulled yellow mustard},
    journal = {Journal of the American Oil Chemists' Society},
    volume = {94},
    number = {1},
    pages = {149-160},
    ISSN = {0003021X (ISSN)},
    DOI = {10.1007/s11746-016-2922-6},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85000982088&doi=10.1007%2fs11746-016-2922-6&partnerID=40&md5=adfc1997339034e0d1c241dac87c0388},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] S. Tang, P. H. Wang, S. A. Higgins, F. E. Löffler, and E. A. Edwards, “Sister dehalobacter genomes reveal specialization in organohalide respiration and recent strain differentiation likely driven by chlorinated substrates,” Frontiers in microbiology, vol. 7, 2016.
    [Bibtex]
    @article{RN196_2016,
    author = {Tang, S. and Wang, P. H. and Higgins, S. A. and Löffler, F. E. and Edwards, E. A.},
    title = {Sister Dehalobacter genomes reveal specialization in organohalide respiration and recent strain differentiation likely driven by chlorinated substrates},
    journal = {Frontiers in Microbiology},
    volume = {7},
    ISSN = {1664302X (ISSN)},
    DOI = {10.3389/fmicb.2016.00100},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84962145245&doi=10.3389%2ffmicb.2016.00100&partnerID=40&md5=6dc1b162071c91036ee10d63046cdd14},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] M. K. Toroghi, W. R. Cluett, and R. Mahadevan, “Multiscale metabolic modeling approach for predicting blood alcohol concentration,” Ieee life sciences letters, vol. 2, iss. 4, pp. 59-62, 2016.
    [Bibtex]
    @article{RN1055_2016,
    author = {Toroghi, M. K. and Cluett, W. R. and Mahadevan, R.},
    title = {Multiscale metabolic modeling approach for predicting blood alcohol concentration},
    journal = {IEEE Life Sciences Letters},
    volume = {2},
    number = {4},
    pages = {59-62},
    DOI = {10.1109/LLS.2016.2644647},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85020528682&doi=10.1109%2fLLS.2016.2644647&partnerID=40&md5=75fe7794f9215c0f51ce9b0288b6e8ba},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] M. K. Toroghi, W. R. Cluett, and R. Mahadevan, “A multi-scale model of the whole human body based on dynamic parsimonious flux balance analysis,” Ifac-papersonline, vol. 49, iss. 7, pp. 937-942, 2016.
    [Bibtex]
    @article{RN383_2016,
    author = {Toroghi, M. K. and Cluett, W. R. and Mahadevan, R.},
    title = {A multi-scale model of the whole human body based on dynamic parsimonious flux balance analysis},
    journal = {IFAC-PapersOnLine},
    volume = {49},
    number = {7},
    pages = {937-942},
    ISSN = {24058963 (ISSN)},
    DOI = {10.1016/j.ifacol.2016.07.319},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84991032295&doi=10.1016%2fj.ifacol.2016.07.319&partnerID=40&md5=c4bd0319e2d5cbb6a048dec95121875f},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] M. L. Urbanus, A. T. Quaile, P. J. Stogios, M. Morar, C. Rao, R. Di Leo, E. Evdokimova, M. Lam, C. Oatway, M. E. Cuff, J. Osipiuk, K. Michalska, B. P. Nocek, M. Taipale, A. Savchenko, and A. W. Ensminger, “Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, legionella pneumophila,” Molecular systems biology, vol. 12, iss. 12, 2016.
    [Bibtex]
    @article{RN887_2016,
    author = {Urbanus, M. L. and Quaile, A. T. and Stogios, P. J. and Morar, M. and Rao, C. and Di Leo, R. and Evdokimova, E. and Lam, M. and Oatway, C. and Cuff, M. E. and Osipiuk, J. and Michalska, K. and Nocek, B. P. and Taipale, M. and Savchenko, A. and Ensminger, A. W.},
    title = {Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila},
    journal = {Molecular Systems Biology},
    volume = {12},
    number = {12},
    ISSN = {17444292 (ISSN)},
    DOI = {10.15252/msb.20167381},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85007453813&doi=10.15252%2fmsb.20167381&partnerID=40&md5=256149de1b283ef9e99382d44d43d1c2},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] T. V. Vuong, M. Foumani, B. MacCormick, R. Kwan, and E. R. Master, “Direct comparison of gluco-oligosaccharide oxidase variants and glucose oxidase: substrate range and h2o2 stability,” Scientific reports, vol. 6, 2016.
    [Bibtex]
    @article{RN317_2016,
    author = {Vuong, T. V. and Foumani, M. and MacCormick, B. and Kwan, R. and Master, E. R.},
    title = {Direct comparison of gluco-oligosaccharide oxidase variants and glucose oxidase: Substrate range and H2O2 stability},
    journal = {Scientific Reports},
    volume = {6},
    ISSN = {20452322 (ISSN)},
    DOI = {10.1038/srep37356},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84996486454&doi=10.1038%2fsrep37356&partnerID=40&md5=a9763bb162deada8af5cf375412f64bd},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] P. H. Wang, S. Tang, K. Nemr, R. Flick, J. Yan, R. Mahadevan, A. F Yakunin, F. E. Löffler, and E. A. Edwards, “Refined experimental annotation reveals conserved corrinoid autotrophy in chloroform-respiring dehalobacter isolates,” Isme journal, vol. 11, iss. 3, pp. 626-640, 2016.
    [Bibtex]
    @article{RN189_2016,
    author = {Wang, P. H. and Tang, S. and Nemr, K. and Flick, R. and Yan, J. and Mahadevan, R. and F Yakunin, A. and Löffler, F. E. and Edwards, E. A.},
    title = {Refined experimental annotation reveals conserved corrinoid autotrophy in chloroform-respiring Dehalobacter isolates},
    journal = {ISME Journal},
    volume = {11},
    number = {3},
    pages = {626-640},
    ISSN = {17517362 (ISSN)},
    DOI = {10.1038/ismej.2016.158},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85000542418&doi=10.1038%2fismej.2016.158&partnerID=40&md5=c734f35aee9ec504495cbfc8b7aa7417},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] W. Wang, R. Yan, B. P. Nocek, T. V. Vuong, R. D. Leo, X. Xu, H. Cui, P. Gatenholm, G. Toriz, M. Tenkanen, A. Savchenko, and E. R. Master, “Biochemical and structural characterization of a five-domain gh115 α-glucuronidase from the marine bacterium saccharophagus degradans 2-40t,” Journal of biological chemistry, vol. 291, iss. 27, pp. 14120-14133, 2016.
    [Bibtex]
    @article{RN318_2016,
    author = {Wang, W. and Yan, R. and Nocek, B. P. and Vuong, T. V. and Leo, R. D. and Xu, X. and Cui, H. and Gatenholm, P. and Toriz, G. and Tenkanen, M. and Savchenko, A. and Master, E. R.},
    title = {Biochemical and structural characterization of a five-domain GH115 α-Glucuronidase from the marine bacterium Saccharophagus degradans 2-40T},
    journal = {Journal of Biological Chemistry},
    volume = {291},
    number = {27},
    pages = {14120-14133},
    ISSN = {00219258 (ISSN)},
    DOI = {10.1074/jbc.M115.702944},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84976872257&doi=10.1074%2fjbc.M115.702944&partnerID=40&md5=68198c38d4525df0b56f4feda325de37},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] K. Wei, A. Grostern, W. W. M. Chan, R. E. Richardson, and E. A. Edwards, “Electron acceptor interactions between organohalide-respiring bacteria: cross-feeding, competition, and inhibition,” in Organohalide-respiring bacteria, Springer Berlin Heidelberg, 2016, pp. 283-308.
    [Bibtex]
    @incollection{RN198,
    author = {Wei, K. and Grostern, A. and Chan, W. W. M. and Richardson, R. E. and Edwards, E. A.},
    title = {Electron acceptor interactions between organohalide-respiring bacteria: Cross-feeding, competition, and inhibition},
    booktitle = {Organohalide-Respiring Bacteria},
    publisher = {Springer Berlin Heidelberg},
    pages = {283-308},
    ISBN = {9783662498750 (ISBN); 9783662498736 (ISBN)},
    DOI = {10.1007/978-3-662-49875-0_13},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-85006826674&doi=10.1007%2f978-3-662-49875-0_13&partnerID=40&md5=fdbceeb479714dfe124d75763ce45141},
    year = {2016},
    type = {Book Section}
    }
  • [DOI] M. T. Wong, W. Wang, M. Lacourt, M. Couturier, E. A. Edwards, and E. R. Master, “Substrate-driven convergence of the microbial community in lignocellulose-amended enrichments of gut microflora from the canadian beaver (castor canadensis) and north american moose (alces americanus),” Frontiers in microbiology, vol. 7, iss. JUN, 2016.
    [Bibtex]
    @article{RN200_2016,
    author = {Wong, M. T. and Wang, W. and Lacourt, M. and Couturier, M. and Edwards, E. A. and Master, E. R.},
    title = {Substrate-driven convergence of the microbial community in lignocellulose-amended enrichments of gut microflora from the Canadian beaver (Castor canadensis) and North American moose (Alces americanus)},
    journal = {Frontiers in Microbiology},
    volume = {7},
    number = {JUN},
    ISSN = {1664302X (ISSN)},
    DOI = {10.3389/fmicb.2016.00961},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84979998413&doi=10.3389%2ffmicb.2016.00961&partnerID=40&md5=11da4d2e0d28aa7b9b40d4099b759dc4},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] Y. Xiao, L. A. Reis, N. Feric, E. J. Knee, J. Gu, S. Cao, C. Laschinger, C. Londono, J. Antolovich, A. P. McGuigan, and M. Radisic, “Diabetic wound regeneration using peptide-modified hydrogels to target re-epithelialization,” Proceedings of the national academy of sciences of the united states of america, vol. 113, iss. 40, p. E5792-E5801, 2016.
    [Bibtex]
    @article{RN478_2016,
    author = {Xiao, Y. and Reis, L. A. and Feric, N. and Knee, E. J. and Gu, J. and Cao, S. and Laschinger, C. and Londono, C. and Antolovich, J. and McGuigan, A. P. and Radisic, M.},
    title = {Diabetic wound regeneration using peptide-modified hydrogels to target re-epithelialization},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    volume = {113},
    number = {40},
    pages = {E5792-E5801},
    ISSN = {00278424 (ISSN)},
    DOI = {10.1073/pnas.1612277113},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84989829732&doi=10.1073%2fpnas.1612277113&partnerID=40&md5=29f4b1953416fd1e908f1cd26a4448ad},
    year = {2016},
    type = {Journal Article}
    }
  • [DOI] B. Xu, D. Rodenhizer, S. Lakhani, X. Zhang, J. P. Soleas, L. Ailles, and A. P. McGuigan, “Patterning cellular compartments within tracer cultures using sacrificial gelatin printing,” Biofabrication, vol. 8, iss. 3, 2016.
    [Bibtex]
    @article{RN479_2016,
    author = {Xu, B. and Rodenhizer, D. and Lakhani, S. and Zhang, X. and Soleas, J. P. and Ailles, L. and McGuigan, A. P.},
    title = {Patterning cellular compartments within TRACER cultures using sacrificial gelatin printing},
    journal = {Biofabrication},
    volume = {8},
    number = {3},
    ISSN = {17585082 (ISSN)},
    DOI = {10.1088/1758-5090/8/3/035018},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84992058697&doi=10.1088%2f1758-5090%2f8%2f3%2f035018&partnerID=40&md5=e24f8e510514b153c7cdde1a1bc71f3e},
    year = {2016},
    type = {Journal Article}
    }

2015

  • [DOI] M. Alcaide, P. J. Stogios, A. Lafraya, A. Tchigvintsev, R. Flick, R. Bargiela, T. N. Chernikova, O. N. Reva, T. Hai, C. C. Leggewie, N. Katzke, V. La Cono, R. Matesanz, M. Jebbar, K. E. Jaeger, M. M. Yakimov, A. F. Yakunin, P. N. Golyshin, O. V. Golyshina, A. Savchenko, and M. Ferrer, “Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats,” Environmental microbiology, vol. 17, iss. 2, pp. 332-345, 2015.
    [Bibtex]
    @article{RN792_2015,
    author = {Alcaide, M. and Stogios, P. J. and Lafraya, A. and Tchigvintsev, A. and Flick, R. and Bargiela, R. and Chernikova, T. N. and Reva, O. N. and Hai, T. and Leggewie, C. C. and Katzke, N. and La Cono, V. and Matesanz, R. and Jebbar, M. and Jaeger, K. E. and Yakimov, M. M. and Yakunin, A. F. and Golyshin, P. N. and Golyshina, O. V. and Savchenko, A. and Ferrer, M.},
    title = {Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats},
    journal = {Environmental Microbiology},
    volume = {17},
    number = {2},
    pages = {332-345},
    ISSN = {14622912 (ISSN)},
    DOI = {10.1111/1462-2920.12660},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84923648530&doi=10.1111%2f1462-2920.12660&partnerID=40&md5=557feff3aba3a4e4ba6f6006db5f02ad},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] M. Alcaide, A. Tchigvintsev, M. Martínez-Martínez, A. Popovic, O. N. Reva, Á. Lafraya, R. Bargiela, T. Y. Nechitaylo, R. Matesanz, M. A. Cambon-Bonavita, M. Jebbar, M. M. Yakimov, A. Savchenko, O. V. Golyshina, A. F. Yakunin, P. N. Golyshin, and M. Ferrer, “Identification and characterization of carboxyl esterases of gill chamber-associated microbiota in the deep-sea shrimp rimicaris exoculata by using functional metagenomics,” Applied and environmental microbiology, vol. 81, iss. 6, pp. 2125-2136, 2015.
    [Bibtex]
    @article{RN790_2015,
    author = {Alcaide, M. and Tchigvintsev, A. and Martínez-Martínez, M. and Popovic, A. and Reva, O. N. and Lafraya, Á and Bargiela, R. and Nechitaylo, T. Y. and Matesanz, R. and Cambon-Bonavita, M. A. and Jebbar, M. and Yakimov, M. M. and Savchenko, A. and Golyshina, O. V. and Yakunin, A. F. and Golyshin, P. N. and Ferrer, M.},
    title = {Identification and characterization of carboxyl esterases of gill chamber-associated microbiota in the deep-sea shrimp Rimicaris exoculata by using functional metagenomics},
    journal = {Applied and Environmental Microbiology},
    volume = {81},
    number = {6},
    pages = {2125-2136},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.03387-14},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84924692190&doi=10.1128%2fAEM.03387-14&partnerID=40&md5=37c5396c9df936684e4ff34e44f8e18a},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] N. Beloglazova, K. Kuznedelov, R. Flick, K. A. Datsenko, G. Brown, A. Popovic, S. Lemak, E. Semenova, K. Severinov, and A. F. Yakunin, “Crispr rna binding and dna target recognition by purified cascade complexes from escherichia coli,” Nucleic acids research, vol. 43, iss. 1, pp. 530-543, 2015.
    [Bibtex]
    @article{RN782_2015,
    author = {Beloglazova, N. and Kuznedelov, K. and Flick, R. and Datsenko, K. A. and Brown, G. and Popovic, A. and Lemak, S. and Semenova, E. and Severinov, K. and Yakunin, A. F.},
    title = {CRISPR RNA binding and DNA target recognition by purified Cascade complexes from Escherichia coli},
    journal = {Nucleic Acids Research},
    volume = {43},
    number = {1},
    pages = {530-543},
    ISSN = {03051048 (ISSN)},
    DOI = {10.1093/nar/gku1285},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84942079467&doi=10.1093%2fnar%2fgku1285&partnerID=40&md5=b91fe34d8d65e3fab3e14d1adee3ade6},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] S. Bonilla, H. Tran, and D. G. Allen, “Enhancing pulp and paper mill biosludge dewaterability using enzymes,” Water research, vol. 68, pp. 692-700, 2015.
    [Bibtex]
    @article{RN524_2015,
    author = {Bonilla, S. and Tran, H. and Allen, D. G.},
    title = {Enhancing pulp and paper mill biosludge dewaterability using enzymes},
    journal = {Water Research},
    volume = {68},
    pages = {692-700},
    ISSN = {00431354 (ISSN)},
    DOI = {10.1016/j.watres.2014.10.057},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84911420343&doi=10.1016%2fj.watres.2014.10.057&partnerID=40&md5=adf749639eb28e8b44d928b6d4862d39},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] M. Couturier, D. Navarro, D. Chevret, B. Henrissat, F. Piumi, F. J. Ruiz-Dueñas, A. T. Martinez, I. V. Grigoriev, R. Riley, A. Lipzen, J. G. Berrin, E. R. Master, and M. N. Rosso, “Enhanced degradation of softwood versus hardwood by the white-rot fungus pycnoporus coccineus,” Biotechnology for biofuels, vol. 8, iss. 1, 2015.
    [Bibtex]
    @article{RN324_2015,
    author = {Couturier, M. and Navarro, D. and Chevret, D. and Henrissat, B. and Piumi, F. and Ruiz-Dueñas, F. J. and Martinez, A. T. and Grigoriev, I. V. and Riley, R. and Lipzen, A. and Berrin, J. G. and Master, E. R. and Rosso, M. N.},
    title = {Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus},
    journal = {Biotechnology for Biofuels},
    volume = {8},
    number = {1},
    ISSN = {17546834 (ISSN)},
    DOI = {10.1186/s13068-015-0407-8},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84950310403&doi=10.1186%2fs13068-015-0407-8&partnerID=40&md5=18bce8045e5c75471cb6dd4456b82148},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] G. Cox, P. J. Stogios, A. Savchenko, and G. D. Wright, “Structural and molecular basis for resistance to aminoglycoside antibiotics by the adenylyltransferase ant(2″)-ia,” Mbio, vol. 6, iss. 1, 2015.
    [Bibtex]
    @article{RN905_2015,
    author = {Cox, G. and Stogios, P. J. and Savchenko, A. and Wright, G. D.},
    title = {Structural and molecular basis for resistance to aminoglycoside antibiotics by the adenylyltransferase ANT(2″)-Ia},
    journal = {mBio},
    volume = {6},
    number = {1},
    ISSN = {21612129 (ISSN)},
    DOI = {10.1128/mBio.02180-14},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84924108668&doi=10.1128%2fmBio.02180-14&partnerID=40&md5=9c815c2e75fa1914888963eb01ec8723},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] A. M. Crowe, P. J. Stogios, I. Casabon, E. Evdokimova, A. Savchenko, and L. D. Eltis, “Structural and functional characterization of a ketosteroid transcriptional regulator of mycobacterium tuberculosis,” Journal of biological chemistry, vol. 290, iss. 2, pp. 872-882, 2015.
    [Bibtex]
    @article{RN904_2015,
    author = {Crowe, A. M. and Stogios, P. J. and Casabon, I. and Evdokimova, E. and Savchenko, A. and Eltis, L. D.},
    title = {Structural and functional characterization of a ketosteroid transcriptional regulator of Mycobacterium tuberculosis},
    journal = {Journal of Biological Chemistry},
    volume = {290},
    number = {2},
    pages = {872-882},
    ISSN = {00219258 (ISSN)},
    DOI = {10.1074/jbc.M114.607481},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84920887665&doi=10.1074%2fjbc.M114.607481&partnerID=40&md5=28eae36ff2f7d0334454f8b025acdf82},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] E. D’Arcangelo and A. P. McGuigan, “Micropatterning strategies to engineer controlled cell and tissue architecture in vitro,” Biotechniques, vol. 58, iss. 1, pp. 13-23, 2015.
    [Bibtex]
    @article{RN485_2015,
    author = {D'Arcangelo, E. and McGuigan, A. P.},
    title = {Micropatterning strategies to engineer controlled cell and tissue architecture in vitro},
    journal = {BioTechniques},
    volume = {58},
    number = {1},
    pages = {13-23},
    ISSN = {07366205 (ISSN)},
    DOI = {10.2144/000114245},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84921780965&doi=10.2144%2f000114245&partnerID=40&md5=17edacccd1c6d2d24a48bb92b94cf386},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] A. Dumitrache, H. J. Eberl, D. G. Allen, and G. M. Wolfaardt, “Mathematical modeling to validate on-line co2 measurements as a metric for cellulolytic biofilm activity in continuous-flow bioreactors,” Biochemical engineering journal, vol. 101, pp. 55-67, 2015.
    [Bibtex]
    @article{RN595_2015,
    author = {Dumitrache, A. and Eberl, H. J. and Allen, D. G. and Wolfaardt, G. M.},
    title = {Mathematical modeling to validate on-line CO2 measurements as a metric for cellulolytic biofilm activity in continuous-flow bioreactors},
    journal = {Biochemical Engineering Journal},
    volume = {101},
    pages = {55-67},
    ISSN = {1369703X (ISSN)},
    DOI = {10.1016/j.bej.2015.04.022},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84929148938&doi=10.1016%2fj.bej.2015.04.022&partnerID=40&md5=16a89ce6d5feaf364530944283c95834},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] A. Ebrahim, E. Almaas, E. Bauer, A. Bordbar, A. P. Burgard, R. L. Chang, A. Dräger, I. Famili, A. M. Feist, R. M. T. Fleming, S. S. Fong, V. Hatzimanikatis, A. Holder, M. Hucka, D. Hyduke, N. Jamshidi, S. Y. Lee, N. Le Novère, J. A. Lerman, N. E. Lewis, D. Ma, R. Mahadevan, C. Maranas, H. Nagarajan, A. Navid, J. Nielsen, L. K. Nielsen, J. Nogales, A. Noronha, C. Pal, B. O. Palsson, J. A. Papin, K. R. Patil, N. D. Price, J. L. Reed, M. Saunders, R. S. Senger, N. Sonnenschein, Y. Sun, and I. Thiele, “Do genome-scale models need exact solvers or clearer standards?,” Molecular systems biology, vol. 11, iss. 10, p. 831, 2015.
    [Bibtex]
    @article{RN385_2015,
    author = {Ebrahim, A. and Almaas, E. and Bauer, E. and Bordbar, A. and Burgard, A. P. and Chang, R. L. and Dräger, A. and Famili, I. and Feist, A. M. and Fleming, R. M. T. and Fong, S. S. and Hatzimanikatis, V. and Holder, A. and Hucka, M. and Hyduke, D. and Jamshidi, N. and Lee, S. Y. and Le Novère, N. and Lerman, J. A. and Lewis, N. E. and Ma, D. and Mahadevan, R. and Maranas, C. and Nagarajan, H. and Navid, A. and Nielsen, J. and Nielsen, L. K. and Nogales, J. and Noronha, A. and Pal, C. and Palsson, B. O. and Papin, J. A. and Patil, K. R. and Price, N. D. and Reed, J. L. and Saunders, M. and Senger, R. S. and Sonnenschein, N. and Sun, Y. and Thiele, I.},
    title = {Do genome-scale models need exact solvers or clearer standards?},
    journal = {Molecular Systems Biology},
    volume = {11},
    number = {10},
    pages = {831},
    ISSN = {17444292 (ISSN)},
    DOI = {10.15252/msb.20156157},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84945933008&doi=10.15252%2fmsb.20156157&partnerID=40&md5=23e7773bebee383ff0f7f562b31394a8},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] M. Foumani, T. V. Vuong, B. MacCormick, and E. R. Master, “Enhanced polysaccharide binding and activity on linear β-glucans through addition of carbohydrate-binding modules to either terminus of a glucooligosaccharide oxidase,” Plos one, vol. 10, iss. 5, 2015.
    [Bibtex]
    @article{RN329_2015,
    author = {Foumani, M. and Vuong, T. V. and MacCormick, B. and Master, E. R.},
    title = {Enhanced polysaccharide binding and activity on linear β-glucans through addition of carbohydrate-binding modules to either terminus of a glucooligosaccharide oxidase},
    journal = {PLoS ONE},
    volume = {10},
    number = {5},
    ISSN = {19326203 (ISSN)},
    DOI = {10.1371/journal.pone.0125398},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84928799208&doi=10.1371%2fjournal.pone.0125398&partnerID=40&md5=bd4836b8ba0e308d032991973d0c49d8},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] M. L. Gandla, M. Derba-Maceluch, X. Liu, L. Gerber, E. R. Master, E. J. Mellerowicz, and L. J. Jönsson, “Expression of a fungal glucuronoyl esterase in populus: effects on wood properties and saccharification efficiency,” Phytochemistry, vol. 112, iss. 1, pp. 210-220, 2015.
    [Bibtex]
    @article{RN335_2015,
    author = {Gandla, M. L. and Derba-Maceluch, M. and Liu, X. and Gerber, L. and Master, E. R. and Mellerowicz, E. J. and Jönsson, L. J.},
    title = {Expression of a fungal glucuronoyl esterase in Populus: Effects on wood properties and saccharification efficiency},
    journal = {Phytochemistry},
    volume = {112},
    number = {1},
    pages = {210-220},
    ISSN = {00319422 (ISSN)},
    DOI = {10.1016/j.phytochem.2014.06.002},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84935897099&doi=10.1016%2fj.phytochem.2014.06.002&partnerID=40&md5=d8a9e2dd94957d0881547d1ab1611ebb},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] A. Gaona, Y. Lawryshyn, and B. Saville, “The effect of fed-batch operation and rotational speed on high-solids enzymatic hydrolysis of hardwood substrates,” Industrial biotechnology, vol. 11, iss. 5, pp. 277-283, 2015.
    [Bibtex]
    @article{RN639_2015,
    author = {Gaona, A. and Lawryshyn, Y. and Saville, B.},
    title = {The effect of fed-batch operation and rotational speed on high-solids enzymatic hydrolysis of hardwood substrates},
    journal = {Industrial Biotechnology},
    volume = {11},
    number = {5},
    pages = {277-283},
    ISSN = {15509087 (ISSN)},
    DOI = {10.1089/ind.2014.0031},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84945394171&doi=10.1089%2find.2014.0031&partnerID=40&md5=70c17278a6eaf1564c8ad53d0d10d9b8},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] P. Gawand, F. Said Abukar, N. Venayak, S. Partow, A. E. Motter, and R. Mahadevan, “Sub-optimal phenotypes of double-knockout mutants of escherichia coli depend on the order of gene deletions,” Integrative biology : quantitative biosciences from nano to macro, vol. 7, iss. 8, pp. 930-939, 2015.
    [Bibtex]
    @article{RN395_2015,
    author = {Gawand, P. and Said Abukar, F. and Venayak, N. and Partow, S. and Motter, A. E. and Mahadevan, R.},
    title = {Sub-optimal phenotypes of double-knockout mutants of Escherichia coli depend on the order of gene deletions},
    journal = {Integrative biology : quantitative biosciences from nano to macro},
    volume = {7},
    number = {8},
    pages = {930-939},
    ISSN = {17579694 (ISSN)},
    DOI = {10.1039/c5ib00096c},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84938679149&doi=10.1039%2fc5ib00096c&partnerID=40&md5=0d13297e805ab304c652952bf1e9206b},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] S. N. Genin, J. S. Aitchison, and D. G. Allen, “Novel waveguide reactor design for enhancing algal biofilm growth,” Algal research, vol. 12, pp. 529-538, 2015.
    [Bibtex]
    @article{RN520_2015,
    author = {Genin, S. N. and Aitchison, J. S. and Allen, D. G.},
    title = {Novel waveguide reactor design for enhancing algal biofilm growth},
    journal = {Algal Research},
    volume = {12},
    pages = {529-538},
    ISSN = {22119264 (ISSN)},
    DOI = {10.1016/j.algal.2015.10.013},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84947921761&doi=10.1016%2fj.algal.2015.10.013&partnerID=40&md5=6f595f9a7098d3cbb24f9acc055aff6e},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] N. D. Gold, C. M. Gowen, F. X. Lussier, S. C. Cautha, R. Mahadevan, and V. J. J. Martin, “Metabolic engineering of a tyrosine-overproducing yeast platform using targeted metabolomics,” Microbial cell factories, vol. 14, iss. 1, 2015.
    [Bibtex]
    @article{RN389_2015,
    author = {Gold, N. D. and Gowen, C. M. and Lussier, F. X. and Cautha, S. C. and Mahadevan, R. and Martin, V. J. J.},
    title = {Metabolic engineering of a tyrosine-overproducing yeast platform using targeted metabolomics},
    journal = {Microbial Cell Factories},
    volume = {14},
    number = {1},
    ISSN = {14752859 (ISSN)},
    DOI = {10.1186/s12934-015-0252-2},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84931041879&doi=10.1186%2fs12934-015-0252-2&partnerID=40&md5=f250e9994abb1c36e5320c499fde1b9f},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] A. S. Halavaty, R. L. Rich, C. Chen, J. C. Joo, G. Minasov, I. Dubrovska, J. R. Winsor, D. G. Myszka, M. Duban, L. Shuvalova, A. F. Yakunin, and W. F. Anderson, “Structural and functional analysis of betaine aldehyde dehydrogenase from staphylococcus aureus,” Acta crystallographica section d: biological crystallography, vol. 71, pp. 1159-1175, 2015.
    [Bibtex]
    @article{RN788_2015,
    author = {Halavaty, A. S. and Rich, R. L. and Chen, C. and Joo, J. C. and Minasov, G. and Dubrovska, I. and Winsor, J. R. and Myszka, D. G. and Duban, M. and Shuvalova, L. and Yakunin, A. F. and Anderson, W. F.},
    title = {Structural and functional analysis of betaine aldehyde dehydrogenase from Staphylococcus aureus},
    journal = {Acta Crystallographica Section D: Biological Crystallography},
    volume = {71},
    pages = {1159-1175},
    ISSN = {09074449 (ISSN)},
    DOI = {10.1107/S1399004715004228},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84929233023&doi=10.1107%2fS1399004715004228&partnerID=40&md5=8b2a568d26fa65e5794e19f9ca797ab1},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] L. A. Hug and E. A. Edwards, “Corrigendum to diversity of reductive dehalogenase genes from environmental samples and enrichment cultures identified with degenerate primer pcr screens,” Frontiers in microbiology, vol. 6, iss. 30, 2015.
    [Bibtex]
    @article{RN205_2015,
    author = {Hug, L. A. and Edwards, E. A.},
    title = {Corrigendum to Diversity of reductive dehalogenase genes from environmental samples and enrichment cultures identified with degenerate primer PCR screens},
    journal = {Frontiers in Microbiology},
    volume = {6},
    number = {30},
    ISSN = {1664302X (ISSN)},
    DOI = {10.3389/fmicb.2015.00030},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84927512244&doi=10.3389%2ffmicb.2015.00030&partnerID=40&md5=400aad7c88179281ed58a538a5608501},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] E. Huynh, B. Y. C. Leung, B. L. Helfield, M. Shakiba, J. A. Gandier, C. S. Jin, E. R. Master, B. C. Wilson, D. E. Goertz, and G. Zheng, “In situ conversion of porphyrin microbubbles to nanoparticles for multimodality imaging,” Nature nanotechnology, vol. 10, iss. 4, pp. 325-332, 2015.
    [Bibtex]
    @article{RN332_2015,
    author = {Huynh, E. and Leung, B. Y. C. and Helfield, B. L. and Shakiba, M. and Gandier, J. A. and Jin, C. S. and Master, E. R. and Wilson, B. C. and Goertz, D. E. and Zheng, G.},
    title = {In situ conversion of porphyrin microbubbles to nanoparticles for multimodality imaging},
    journal = {Nature Nanotechnology},
    volume = {10},
    number = {4},
    pages = {325-332},
    ISSN = {17483387 (ISSN)},
    DOI = {10.1038/nnano.2015.25},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84927176348&doi=10.1038%2fnnano.2015.25&partnerID=40&md5=ed30d58154b4f2a2081e2e4359157f06},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] M. A. Islam, K. Zengler, E. A. Edwards, R. Mahadevan, and G. Stephanopoulos, “Investigating moorella thermoacetica metabolism with a genome-scale constraint-based metabolic model,” Integrative biology : quantitative biosciences from nano to macro, vol. 7, iss. 8, pp. 869-882, 2015.
    [Bibtex]
    @article{RN202_2015,
    author = {Islam, M. A. and Zengler, K. and Edwards, E. A. and Mahadevan, R. and Stephanopoulos, G.},
    title = {Investigating Moorella thermoacetica metabolism with a genome-scale constraint-based metabolic model},
    journal = {Integrative biology : quantitative biosciences from nano to macro},
    volume = {7},
    number = {8},
    pages = {869-882},
    ISSN = {17579708 (ISSN)},
    DOI = {10.1039/c5ib00095e},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84979823459&doi=10.1039%2fc5ib00095e&partnerID=40&md5=54574cbb1d82236c8c5245465ef13a29},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] S. Javaherian, E. D’Arcangelo, B. Slater, T. Zulueta-Coarasa, R. Fernandez-Gonzalez, and A. P. McGuigan, “An in vitro model of tissue boundary formation for dissecting the contribution of different boundary forming mechanisms,” Integrative biology : quantitative biosciences from nano to macro, vol. 7, iss. 3, pp. 298-312, 2015.
    [Bibtex]
    @article{RN484_2015,
    author = {Javaherian, S. and D'Arcangelo, E. and Slater, B. and Zulueta-Coarasa, T. and Fernandez-Gonzalez, R. and McGuigan, A. P.},
    title = {An in vitro model of tissue boundary formation for dissecting the contribution of different boundary forming mechanisms},
    journal = {Integrative biology : quantitative biosciences from nano to macro},
    volume = {7},
    number = {3},
    pages = {298-312},
    ISSN = {17579708 (ISSN)},
    DOI = {10.1039/c4ib00272e},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84952716174&doi=10.1039%2fc4ib00272e&partnerID=40&md5=cb9b7b168f96ae57fa8a25fe3dfc156d},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] A. P. Kaur, B. P. Nocek, X. Xu, M. J. Lowden, J. F. Leyva, P. J. Stogios, H. Cui, R. Di Leo, J. Powlowski, A. Tsang, and A. Savchenko, “Functional and structural diversity in gh62 α-l-arabinofuranosidases from the thermophilic fungus scytalidium thermophilum,” Microbial biotechnology, vol. 8, iss. 3, pp. 419-433, 2015.
    [Bibtex]
    @article{RN907_2015,
    author = {Kaur, A. P. and Nocek, B. P. and Xu, X. and Lowden, M. J. and Leyva, J. F. and Stogios, P. J. and Cui, H. and Di Leo, R. and Powlowski, J. and Tsang, A. and Savchenko, A.},
    title = {Functional and structural diversity in GH62 α-L-arabinofuranosidases from the thermophilic fungus Scytalidium thermophilum},
    journal = {Microbial Biotechnology},
    volume = {8},
    number = {3},
    pages = {419-433},
    ISSN = {17517907 (ISSN)},
    DOI = {10.1111/1751-7915.12168},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84928052016&doi=10.1111%2f1751-7915.12168&partnerID=40&md5=2836d610f1ea67862cd119297782dbaa},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] S. Klamt and R. Mahadevan, “On the feasibility of growth-coupled product synthesis in microbial strains,” Metabolic engineering, vol. 30, pp. 166-178, 2015.
    [Bibtex]
    @article{RN388_2015,
    author = {Klamt, S. and Mahadevan, R.},
    title = {On the feasibility of growth-coupled product synthesis in microbial strains},
    journal = {Metabolic Engineering},
    volume = {30},
    pages = {166-178},
    ISSN = {10967176 (ISSN)},
    DOI = {10.1016/j.ymben.2015.05.006},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84935478514&doi=10.1016%2fj.ymben.2015.05.006&partnerID=40&md5=7f7f47842fa6c78b28a5e9db27f06e81},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] C. M. D. Kocur, L. Lomheim, H. K. Boparai, A. I. A. Chowdhury, K. P. Weber, L. M. Austrins, E. A. Edwards, B. E. Sleep, and D. M. O’Carroll, “Contributions of abiotic and biotic dechlorination following carboxymethyl cellulose stabilized nanoscale zero valent iron injection,” Environmental science and technology, vol. 49, iss. 14, pp. 8648-8656, 2015.
    [Bibtex]
    @article{RN203_2015,
    author = {Kocur, C. M. D. and Lomheim, L. and Boparai, H. K. and Chowdhury, A. I. A. and Weber, K. P. and Austrins, L. M. and Edwards, E. A. and Sleep, B. E. and O'Carroll, D. M.},
    title = {Contributions of abiotic and biotic dechlorination following carboxymethyl cellulose stabilized nanoscale zero valent iron injection},
    journal = {Environmental Science and Technology},
    volume = {49},
    number = {14},
    pages = {8648-8656},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/acs.est.5b00719},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84937459540&doi=10.1021%2facs.est.5b00719&partnerID=40&md5=3265a180f15acc2af7d2e8eb08f65be9},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] E. Kuznetsova, B. Nocek, G. Brown, K. S. Makarova, R. Flick, Y. I. Wolf, A. Khusnutdinova, E. Evdokimova, K. Jin, K. Tan, A. D. Hanson, G. Hasnain, R. Zallot, V. De Crécy-Lagard, M. Babu, A. Savchenko, A. Joachimiak, A. M. Edwards, E. V. Koonin, and A. F. Yakunin, “Functional diversity of haloacid dehalogenase superfamily phosphatases from saccharomyces cerevisiae: biochemical, structural, and evolutionary insights,” Journal of biological chemistry, vol. 290, iss. 30, pp. 18678-18698, 2015.
    [Bibtex]
    @article{RN783_2015,
    author = {Kuznetsova, E. and Nocek, B. and Brown, G. and Makarova, K. S. and Flick, R. and Wolf, Y. I. and Khusnutdinova, A. and Evdokimova, E. and Jin, K. and Tan, K. and Hanson, A. D. and Hasnain, G. and Zallot, R. and De Crécy-Lagard, V. and Babu, M. and Savchenko, A. and Joachimiak, A. and Edwards, A. M. and Koonin, E. V. and Yakunin, A. F.},
    title = {Functional diversity of haloacid dehalogenase superfamily phosphatases from Saccharomyces cerevisiae: Biochemical, structural, and evolutionary insights},
    journal = {Journal of Biological Chemistry},
    volume = {290},
    number = {30},
    pages = {18678-18698},
    ISSN = {00219258 (ISSN)},
    DOI = {10.1074/jbc.M115.657916},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84937939003&doi=10.1074%2fjbc.M115.657916&partnerID=40&md5=d040fccecb27c5b753406c9fd37b61a0},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] X. Liang, O. Molenda, S. Tang, and E. A. Edwards, “Identity and substrate specificity of reductive dehalogenases expressed in dehalococcoides-containing enrichment cultures maintained on different chlorinated ethenes,” Applied and environmental microbiology, vol. 81, iss. 14, pp. 4626-4633, 2015.
    [Bibtex]
    @article{RN206_2015,
    author = {Liang, X. and Molenda, O. and Tang, S. and Edwards, E. A.},
    title = {Identity and substrate specificity of reductive dehalogenases expressed in Dehalococcoides-containing enrichment cultures maintained on different chlorinated ethenes},
    journal = {Applied and Environmental Microbiology},
    volume = {81},
    number = {14},
    pages = {4626-4633},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.00536-15},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84931436320&doi=10.1128%2fAEM.00536-15&partnerID=40&md5=d9f7711c226728333a71ae060f61a950},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] K. Littunen, P. Kilpeläinen, K. Junka, M. Sipponen, E. R. Master, and J. Seppälä, “Effect of xylan structure on reactivity in graft copolymerization and subsequent binding to cellulose,” Biomacromolecules, vol. 16, iss. 4, pp. 1102-1111, 2015.
    [Bibtex]
    @article{RN331_2015,
    author = {Littunen, K. and Kilpeläinen, P. and Junka, K. and Sipponen, M. and Master, E. R. and Seppälä, J.},
    title = {Effect of xylan structure on reactivity in graft copolymerization and subsequent binding to cellulose},
    journal = {Biomacromolecules},
    volume = {16},
    number = {4},
    pages = {1102-1111},
    ISSN = {15257797 (ISSN)},
    DOI = {10.1021/bm501732b},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84927914358&doi=10.1021%2fbm501732b&partnerID=40&md5=0223faff9d92fe233fadfcf526e9f59f},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] J. M. Luk, B. A. Saville, and H. L. MacLean, “Life cycle air emissions impacts and ownership costs of light-duty vehicles using natural gas as a primary energy source,” Environmental science and technology, vol. 49, iss. 8, pp. 5151-5160, 2015.
    [Bibtex]
    @article{RN640_2015,
    author = {Luk, J. M. and Saville, B. A. and MacLean, H. L.},
    title = {Life cycle air emissions impacts and ownership costs of light-duty vehicles using natural gas as a primary energy source},
    journal = {Environmental Science and Technology},
    volume = {49},
    number = {8},
    pages = {5151-5160},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/es5045387},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84928380963&doi=10.1021%2fes5045387&partnerID=40&md5=0bc80da67208681794203cf7660b4c90},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] R. Mahadevan, A. Von Kamp, and S. Klamt, “Genome-scale strain designs based on regulatory minimal cut sets,” Bioinformatics, vol. 31, iss. 17, pp. 2844-2851, 2015.
    [Bibtex]
    @article{RN392_2015,
    author = {Mahadevan, R. and Von Kamp, A. and Klamt, S.},
    title = {Genome-scale strain designs based on regulatory minimal cut sets},
    journal = {Bioinformatics},
    volume = {31},
    number = {17},
    pages = {2844-2851},
    ISSN = {13674803 (ISSN)},
    DOI = {10.1093/bioinformatics/btv217},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84940738929&doi=10.1093%2fbioinformatics%2fbtv217&partnerID=40&md5=14ec122c3aee5f9127fe5dc76942a058},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] G. Mai-Gisondi, O. Turunen, O. Pastinen, N. Pahimanolis, and E. R. Master, “Enhancement of acetyl xylan esterase activity on cellulose acetate through fusion to a family 3 cellulose binding module,” Enzyme and microbial technology, vol. 79-80, pp. 27-33, 2015.
    [Bibtex]
    @article{RN326_2015,
    author = {Mai-Gisondi, G. and Turunen, O. and Pastinen, O. and Pahimanolis, N. and Master, E. R.},
    title = {Enhancement of acetyl xylan esterase activity on cellulose acetate through fusion to a family 3 cellulose binding module},
    journal = {Enzyme and Microbial Technology},
    volume = {79-80},
    pages = {27-33},
    ISSN = {01410229 (ISSN)},
    DOI = {10.1016/j.enzmictec.2015.07.001},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84937433255&doi=10.1016%2fj.enzmictec.2015.07.001&partnerID=40&md5=83118120d5b77c6402e85907021663bd},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] K. S. Makarova, Y. I. Wolf, O. S. Alkhnbashi, F. Costa, S. A. Shah, S. J. Saunders, R. Barrangou, S. J. J. Brouns, E. Charpentier, D. H. Haft, P. Horvath, S. Moineau, F. J. M. Mojica, R. M. Terns, M. P. Terns, M. F. White, A. F. Yakunin, R. A. Garrett, J. Van Der Oost, R. Backofen, and E. V. Koonin, “An updated evolutionary classification of crispr-cas systems,” Nature reviews microbiology, vol. 13, iss. 11, pp. 722-736, 2015.
    [Bibtex]
    @article{RN791_2015,
    author = {Makarova, K. S. and Wolf, Y. I. and Alkhnbashi, O. S. and Costa, F. and Shah, S. A. and Saunders, S. J. and Barrangou, R. and Brouns, S. J. J. and Charpentier, E. and Haft, D. H. and Horvath, P. and Moineau, S. and Mojica, F. J. M. and Terns, R. M. and Terns, M. P. and White, M. F. and Yakunin, A. F. and Garrett, R. A. and Van Der Oost, J. and Backofen, R. and Koonin, E. V.},
    title = {An updated evolutionary classification of CRISPR-Cas systems},
    journal = {Nature Reviews Microbiology},
    volume = {13},
    number = {11},
    pages = {722-736},
    ISSN = {17401526 (ISSN)},
    DOI = {10.1038/nrmicro3569},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84944449180&doi=10.1038%2fnrmicro3569&partnerID=40&md5=08412e544c4af33665caef4214a21622},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] J. McKechnie, M. Pourbafrani, B. A. Saville, and H. L. MacLean, “Environmental and financial implications of ethanol as a bioethylene feedstock versus as a transportation fuel,” Environmental research letters, vol. 10, iss. 12, 2015.
    [Bibtex]
    @article{RN637_2015,
    author = {McKechnie, J. and Pourbafrani, M. and Saville, B. A. and MacLean, H. L.},
    title = {Environmental and financial implications of ethanol as a bioethylene feedstock versus as a transportation fuel},
    journal = {Environmental Research Letters},
    volume = {10},
    number = {12},
    ISSN = {17489318 (ISSN)},
    DOI = {10.1088/1748-9326/10/12/124018},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84952894873&doi=10.1088%2f1748-9326%2f10%2f12%2f124018&partnerID=40&md5=f77e43ebf00d5863476f02fbddaf4ac3},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] J. McKechnie, M. Pourbafrani, B. A. Saville, and H. L. MacLean, “Exploring impacts of process technology development and regional factors on life cycle greenhouse gas emissions of corn stover ethanol,” Renewable energy, vol. 76, pp. 726-734, 2015.
    [Bibtex]
    @article{RN638_2015,
    author = {McKechnie, J. and Pourbafrani, M. and Saville, B. A. and MacLean, H. L.},
    title = {Exploring impacts of process technology development and regional factors on life cycle greenhouse gas emissions of corn stover ethanol},
    journal = {Renewable Energy},
    volume = {76},
    pages = {726-734},
    ISSN = {09601481 (ISSN)},
    DOI = {10.1016/j.renene.2014.11.088},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84919663630&doi=10.1016%2fj.renene.2014.11.088&partnerID=40&md5=959b08108a36c5f19a530e873d61c2d9},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] T. Meyer and E. A. Edwards, “Corrigendum to “anaerobic digestion of pulp and paper mill wastewater and sludge”,” Water research, vol. 68, p. 849, 2015.
    [Bibtex]
    @article{RN204_2015,
    author = {Meyer, T. and Edwards, E. A.},
    title = {Corrigendum to "Anaerobic digestion of pulp and paper mill wastewater and sludge"},
    journal = {Water Research},
    volume = {68},
    pages = {849},
    ISSN = {00431354 (ISSN)},
    DOI = {10.1016/j.watres.2014.10.059},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84922318993&doi=10.1016%2fj.watres.2014.10.059&partnerID=40&md5=55246133dc7995cb175c38c4c5fac499},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] D. Meziane-Cherif, P. J. Stogios, E. Evdokimova, O. Egorova, A. Savchenko, and P. Courvalin, “Structural and functional adaptation of vancomycin resistance vant serine racemases,” Mbio, vol. 6, iss. 4, 2015.
    [Bibtex]
    @article{RN899_2015,
    author = {Meziane-Cherif, D. and Stogios, P. J. and Evdokimova, E. and Egorova, O. and Savchenko, A. and Courvalin, P.},
    title = {Structural and functional adaptation of vancomycin resistance vant serine racemases},
    journal = {mBio},
    volume = {6},
    number = {4},
    ISSN = {21612129 (ISSN)},
    DOI = {10.1128/mBio.00806-15},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84940839113&doi=10.1128%2fmBio.00806-15&partnerID=40&md5=8c4b76a8d3b826a1816e0571b002a59b},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] M. Morar, E. Evdokimova, C. Chang, A. W. Ensminger, and A. Savchenko, “Crystal structure of the legionella pneumophila lem 10 effector reveals a new member of the hd protein superfamily,” Proteins: structure, function and bioinformatics, vol. 83, iss. 12, pp. 2319-2325, 2015.
    [Bibtex]
    @article{RN897_2015,
    author = {Morar, M. and Evdokimova, E. and Chang, C. and Ensminger, A. W. and Savchenko, A.},
    title = {Crystal structure of the Legionella pneumophila lem 10 effector reveals a new member of the HD protein superfamily},
    journal = {Proteins: Structure, Function and Bioinformatics},
    volume = {83},
    number = {12},
    pages = {2319-2325},
    ISSN = {08873585 (ISSN)},
    DOI = {10.1002/prot.24933},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84954387672&doi=10.1002%2fprot.24933&partnerID=40&md5=2a0ae44dbfcd466091aba9c4df5f3250},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] D. T. Mulder, J. B. McPhee, S. A. Reid-Yu, P. J. Stogios, A. Savchenko, and B. K. Coombes, “Multiple histidines in the periplasmic domain of the salmonella enterica sensor kinase ssra enhance signaling in response to extracellular acidification,” Molecular microbiology, vol. 95, iss. 4, pp. 678-691, 2015.
    [Bibtex]
    @article{RN906_2015,
    author = {Mulder, D. T. and McPhee, J. B. and Reid-Yu, S. A. and Stogios, P. J. and Savchenko, A. and Coombes, B. K.},
    title = {Multiple histidines in the periplasmic domain of the Salmonella enterica sensor kinase SsrA enhance signaling in response to extracellular acidification},
    journal = {Molecular Microbiology},
    volume = {95},
    number = {4},
    pages = {678-691},
    ISSN = {0950382X (ISSN)},
    DOI = {10.1111/mmi.12895},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84922511774&doi=10.1111%2fmmi.12895&partnerID=40&md5=6549ecfe0e526830154048ba4d77062a},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] E. S. Nakayasu, M. A. Sydor, R. N. Brown, R. L. Sontag, T. J. P. Sobreira, G. W. Slysz, D. R. Humphrys, T. Skarina, O. Onoprienko, R. Di Leo, B. L. Deatherage Kaiser, J. Li, C. Ansong, E. D. Cambronne, R. D. Smith, A. Savchenko, and J. N. Adkins, “Identification of salmonella typhimurium deubiquitinase ssel substrates by immunoaffinity enrichment and quantitative proteomic analysis,” Journal of proteome research, vol. 14, iss. 9, pp. 4029-4038, 2015.
    [Bibtex]
    @article{RN908_2015,
    author = {Nakayasu, E. S. and Sydor, M. A. and Brown, R. N. and Sontag, R. L. and Sobreira, T. J. P. and Slysz, G. W. and Humphrys, D. R. and Skarina, T. and Onoprienko, O. and Di Leo, R. and Deatherage Kaiser, B. L. and Li, J. and Ansong, C. and Cambronne, E. D. and Smith, R. D. and Savchenko, A. and Adkins, J. N.},
    title = {Identification of Salmonella typhimurium deubiquitinase SseL substrates by immunoaffinity enrichment and quantitative proteomic analysis},
    journal = {Journal of Proteome Research},
    volume = {14},
    number = {9},
    pages = {4029-4038},
    ISSN = {15353893 (ISSN)},
    DOI = {10.1021/acs.jproteome.5b00574},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84941122119&doi=10.1021%2facs.jproteome.5b00574&partnerID=40&md5=1ec3fccebdf84ce9243609d199833f8e},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] A. B. Namazi, D. G. Allen, and C. Q. Jia, “Effect of chemical components in white liquor on carbon activation,” Canadian journal of chemical engineering, vol. 93, iss. 10, pp. 1705-1712, 2015.
    [Bibtex]
    @article{RN523_2015,
    author = {Namazi, A. B. and Allen, D. G. and Jia, C. Q.},
    title = {Effect of chemical components in white liquor on carbon activation},
    journal = {Canadian Journal of Chemical Engineering},
    volume = {93},
    number = {10},
    pages = {1705-1712},
    ISSN = {00084034 (ISSN)},
    DOI = {10.1002/cjce.22281},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84942366267&doi=10.1002%2fcjce.22281&partnerID=40&md5=7b2d40e06754621fa0034349402ae403},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] A. B. Namazi, D. G. Allen, and C. Q. Jia, “Microwave-assisted pyrolysis and activation of pulp mill sludge,” Biomass and bioenergy, vol. 73, pp. 217-224, 2015.
    [Bibtex]
    @article{RN522_2015,
    author = {Namazi, A. B. and Allen, D. G. and Jia, C. Q.},
    title = {Microwave-assisted pyrolysis and activation of pulp mill sludge},
    journal = {Biomass and Bioenergy},
    volume = {73},
    pages = {217-224},
    ISSN = {09619534 (ISSN)},
    DOI = {10.1016/j.biombioe.2014.12.023},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84920997233&doi=10.1016%2fj.biombioe.2014.12.023&partnerID=40&md5=6e020f0cc4c35e97eba093d8c15b8fec},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] A. B. Namazi, D. G. Allen, and C. Q. Jia, “Probing microwave heating of lignocellulosic biomasses,” Journal of analytical and applied pyrolysis, vol. 112, pp. 121-128, 2015.
    [Bibtex]
    @article{RN596_2015,
    author = {Namazi, A. B. and Allen, D. G. and Jia, C. Q.},
    title = {Probing microwave heating of lignocellulosic biomasses},
    journal = {Journal of Analytical and Applied Pyrolysis},
    volume = {112},
    pages = {121-128},
    ISSN = {01652370 (ISSN)},
    DOI = {10.1016/j.jaap.2015.02.009},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84925357177&doi=10.1016%2fj.jaap.2015.02.009&partnerID=40&md5=37e42cbfb611682785bcc911eca5d57c},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] N. Pahimanolis, P. Kilpeläinen, E. Master, H. Ilvesniemi, and J. Seppälä, “Novel thiol- amine- and amino acid functional xylan derivatives synthesized by thiol-ene reaction,” Carbohydrate polymers, vol. 131, pp. 392-398, 2015.
    [Bibtex]
    @article{RN328_2015,
    author = {Pahimanolis, N. and Kilpeläinen, P. and Master, E. and Ilvesniemi, H. and Seppälä, J.},
    title = {Novel thiol- amine- and amino acid functional xylan derivatives synthesized by thiol-ene reaction},
    journal = {Carbohydrate Polymers},
    volume = {131},
    pages = {392-398},
    ISSN = {01448617 (ISSN)},
    DOI = {10.1016/j.carbpol.2015.06.007},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84933040299&doi=10.1016%2fj.carbpol.2015.06.007&partnerID=40&md5=4161f206da382fdbc93d035a089e2de2},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] K. Parikka, E. Master, and M. Tenkanen, “Oxidation with galactose oxidase: multifunctional enzymatic catalysis,” Journal of molecular catalysis b: enzymatic, vol. 120, pp. 47-59, 2015.
    [Bibtex]
    @article{RN327_2015,
    author = {Parikka, K. and Master, E. and Tenkanen, M.},
    title = {Oxidation with galactose oxidase: Multifunctional enzymatic catalysis},
    journal = {Journal of Molecular Catalysis B: Enzymatic},
    volume = {120},
    pages = {47-59},
    ISSN = {13811177 (ISSN)},
    DOI = {10.1016/j.molcatb.2015.06.006},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84937214091&doi=10.1016%2fj.molcatb.2015.06.006&partnerID=40&md5=0884d3baa8c50eb5c7185f66763ac140},
    year = {2015},
    type = {Journal Article}
    }
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    [Bibtex]
    @article{RN781_2015,
    author = {Placido, A. and Hai, T. and Ferrer, M. and Chernikova, T. N. and Distaso, M. and Armstrong, D. and Yakunin, A. F. and Toshchakov, S. V. and Yakimov, M. M. and Kublanov, I. V. and Golyshina, O. V. and Pesole, G. and Ceci, L. R. and Golyshin, P. N.},
    title = {Diversity of hydrolases from hydrothermal vent sediments of the Levante Bay, Vulcano Island (Aeolian archipelago) identified by activity-based metagenomics and biochemical characterization of new esterases and an arabinopyranosidase},
    journal = {Applied Microbiology and Biotechnology},
    volume = {99},
    number = {23},
    pages = {10031-10046},
    ISSN = {01757598 (ISSN)},
    DOI = {10.1007/s00253-015-6873-x},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84947029800&doi=10.1007%2fs00253-015-6873-x&partnerID=40&md5=e89cc6b808978374501e6356712bfdc6},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] A. T. Quaile, M. L. Urbanus, P. J. Stogios, B. Nocek, T. Skarina, A. W. Ensminger, and A. Savchenko, “Molecular characterization of lubx: functional divergence of the u-box fold by legionella pneumophila,” Structure, vol. 23, iss. 8, pp. 1459-1469, 2015.
    [Bibtex]
    @article{RN902_2015,
    author = {Quaile, A. T. and Urbanus, M. L. and Stogios, P. J. and Nocek, B. and Skarina, T. and Ensminger, A. W. and Savchenko, A.},
    title = {Molecular Characterization of LubX: Functional Divergence of the U-Box Fold by Legionella pneumophila},
    journal = {Structure},
    volume = {23},
    number = {8},
    pages = {1459-1469},
    ISSN = {09692126 (ISSN)},
    DOI = {10.1016/j.str.2015.05.020},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84938750845&doi=10.1016%2fj.str.2015.05.020&partnerID=40&md5=ba093c70a8a8695c2c46446f6af039c5},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] D. Rodenhizer, E. Gaude, D. Cojocari, R. Mahadevan, C. Frezza, B. G. Wouters, and A. P. McGuigan, “Erratum: a three-dimensional engineered tumour for spatial snapshot analysis of cell metabolism and phenotype in hypoxic gradients,” Nature materials, vol. 15, iss. 2, 2015.
    [Bibtex]
    @article{RN482_2015,
    author = {Rodenhizer, D. and Gaude, E. and Cojocari, D. and Mahadevan, R. and Frezza, C. and Wouters, B. G. and McGuigan, A. P.},
    title = {Erratum: A three-dimensional engineered tumour for spatial snapshot analysis of cell metabolism and phenotype in hypoxic gradients},
    journal = {Nature Materials},
    volume = {15},
    number = {2},
    ISSN = {14761122 (ISSN)},
    DOI = {10.1038/nmat4515},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84955459965&doi=10.1038%2fnmat4515&partnerID=40&md5=21dbce64d4816a4689cafcb56111e10e},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] N. Samadifard, C. E. Devine, E. Edwards, K. Mahadevan, and V. G. Papangelakis, “Ferric sulfate leaching of pyrrhotite tailings between 30 to 55 °c,” Minerals, vol. 5, iss. 4, pp. 801-814, 2015.
    [Bibtex]
    @article{RN201_2015,
    author = {Samadifard, N. and Devine, C. E. and Edwards, E. and Mahadevan, K. and Papangelakis, V. G.},
    title = {Ferric sulfate leaching of pyrrhotite tailings between 30 to 55 °C},
    journal = {Minerals},
    volume = {5},
    number = {4},
    pages = {801-814},
    ISSN = {2075163X (ISSN)},
    DOI = {10.3390/min5040526},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84948970345&doi=10.3390%2fmin5040526&partnerID=40&md5=614feb38753da65d39e607adf02e31cd},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] P. J. Schnurr and D. G. Allen, “Factors affecting algae biofilm growth and lipid production: a review,” Renewable and sustainable energy reviews, vol. 52, pp. 418-429, 2015.
    [Bibtex]
    @article{RN521_2015,
    author = {Schnurr, P. J. and Allen, D. G.},
    title = {Factors affecting algae biofilm growth and lipid production: A review},
    journal = {Renewable and Sustainable Energy Reviews},
    volume = {52},
    pages = {418-429},
    ISSN = {13640321 (ISSN)},
    DOI = {10.1016/j.rser.2015.07.090},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84939154070&doi=10.1016%2fj.rser.2015.07.090&partnerID=40&md5=d34e01284a9d151a64a02fa22add4b52},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] M. J. Selig, L. G. Thygesen, C. Felby, and E. R. Master, “Debranching of soluble wheat arabinoxylan dramatically enhances recalcitrant binding to cellulose,” Biotechnology letters, vol. 37, iss. 3, pp. 633-641, 2015.
    [Bibtex]
    @article{RN333_2015,
    author = {Selig, M. J. and Thygesen, L. G. and Felby, C. and Master, E. R.},
    title = {Debranching of soluble wheat arabinoxylan dramatically enhances recalcitrant binding to cellulose},
    journal = {Biotechnology Letters},
    volume = {37},
    number = {3},
    pages = {633-641},
    ISSN = {01415492 (ISSN)},
    DOI = {10.1007/s10529-014-1705-0},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84925543688&doi=10.1007%2fs10529-014-1705-0&partnerID=40&md5=205e2a3e6a21bdec5723b1ff91ccbec7},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] M. J. Selig, T. V. Vuong, M. Gudmundsson, Z. Forsberg, B. Westereng, C. Felby, and E. R. Master, “Modified cellobiohydrolase–cellulose interactions following treatment with lytic polysaccharide monooxygenase cels2 (sclpmo10c) observed by qcm-d,” Cellulose, vol. 22, iss. 4, pp. 2263-2270, 2015.
    [Bibtex]
    @article{RN330_2015,
    author = {Selig, M. J. and Vuong, T. V. and Gudmundsson, M. and Forsberg, Z. and Westereng, B. and Felby, C. and Master, E. R.},
    title = {Modified cellobiohydrolase–cellulose interactions following treatment with lytic polysaccharide monooxygenase CelS2 (ScLPMO10C) observed by QCM-D},
    journal = {Cellulose},
    volume = {22},
    number = {4},
    pages = {2263-2270},
    ISSN = {09690239 (ISSN)},
    DOI = {10.1007/s10570-015-0635-x},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84937970292&doi=10.1007%2fs10570-015-0635-x&partnerID=40&md5=b23d416d01c7cc5832f385003a9bbfd9},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] E. Semenova, K. Kuznedelov, K. A. Datsenko, P. M. Boudry, E. E. Savitskaya, S. Medvedeva, N. Beloglazova, M. Logacheva, A. F. Yakunin, and K. Severinov, “The cas6e ribonuclease is not required for interference and adaptation by the e. coli type i-e crispr-cas system,” Nucleic acids research, vol. 43, iss. 12, pp. 6049-6061, 2015.
    [Bibtex]
    @article{RN785_2015,
    author = {Semenova, E. and Kuznedelov, K. and Datsenko, K. A. and Boudry, P. M. and Savitskaya, E. E. and Medvedeva, S. and Beloglazova, N. and Logacheva, M. and Yakunin, A. F. and Severinov, K.},
    title = {The Cas6e ribonuclease is not required for interference and adaptation by the E. Coli type I-E CRISPR-Cas system},
    journal = {Nucleic Acids Research},
    volume = {43},
    number = {12},
    pages = {6049-6061},
    ISSN = {03051048 (ISSN)},
    DOI = {10.1093/nar/gkv546},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84942156327&doi=10.1093%2fnar%2fgkv546&partnerID=40&md5=9911622085ba4449b36369ef975008ba},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] M. A. Serbanescu, M. Cordova, K. Krastel, R. Flick, N. Beloglazova, A. Latos, A. F. Yakunin, D. B. Senadheera, and D. G. Cvitkovitch, “Role of the streptococcus mutans crispr-cas systems in immunity and cell physiology,” Journal of bacteriology, vol. 197, iss. 4, pp. 749-761, 2015.
    [Bibtex]
    @article{RN787_2015,
    author = {Serbanescu, M. A. and Cordova, M. and Krastel, K. and Flick, R. and Beloglazova, N. and Latos, A. and Yakunin, A. F. and Senadheera, D. B. and Cvitkovitch, D. G.},
    title = {Role of the Streptococcus mutans CRISPR-Cas systems in immunity and cell physiology},
    journal = {Journal of Bacteriology},
    volume = {197},
    number = {4},
    pages = {749-761},
    ISSN = {00219193 (ISSN)},
    DOI = {10.1128/JB.02333-14},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84921739341&doi=10.1128%2fJB.02333-14&partnerID=40&md5=14351483d89fa7bc4b5fc0c5e6f1de2d},
    year = {2015},
    type = {Journal Article}
    }
  • S. Sinichi and L. L. Diosady, “Isopropyl alcohol extraction of mustard oil,” International news on fats, oils and related materials, vol. 26, iss. 3, pp. 179-182, 2015.
    [Bibtex]
    @article{RN682_2015,
    author = {Sinichi, S. and Diosady, L. L.},
    title = {Isopropyl alcohol extraction of mustard oil},
    journal = {International News on Fats, Oils and Related Materials},
    volume = {26},
    number = {3},
    pages = {179-182},
    ISSN = {08978026 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84928474573&partnerID=40&md5=3f3ed976b5b05b71e3581799b2af9dbb},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] J. P. Soleas, T. K. Waddell, and A. P. McGuigan, “Topographically grooved gel inserts for aligning epithelial cells during air-liquid-interface culture,” Biomaterials science, vol. 3, iss. 1, pp. 121-133, 2015.
    [Bibtex]
    @article{RN486_2015,
    author = {Soleas, J. P. and Waddell, T. K. and McGuigan, A. P.},
    title = {Topographically grooved gel inserts for aligning epithelial cells during air-liquid-interface culture},
    journal = {Biomaterials Science},
    volume = {3},
    number = {1},
    pages = {121-133},
    ISSN = {20474830 (ISSN)},
    DOI = {10.1039/c4bm00237g},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84914147134&doi=10.1039%2fc4bm00237g&partnerID=40&md5=2f412efd5893246755f97e280a81dffe},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] R. L. Sontag, C. Mihai, G. Orr, A. Savchenko, T. Skarina, H. Cui, J. R. Cort, J. N. Adkins, and R. N. Brown, “Electroporation of functional bacterial effectors into mammalian cells,” Journal of visualized experiments, iss. 95, 2015.
    [Bibtex]
    @article{RN903_2015,
    author = {Sontag, R. L. and Mihai, C. and Orr, G. and Savchenko, A. and Skarina, T. and Cui, H. and Cort, J. R. and Adkins, J. N. and Brown, R. N.},
    title = {Electroporation of functional bacterial effectors into mammalian cells},
    journal = {Journal of Visualized Experiments},
    number = {95},
    ISSN = {1940087X (ISSN)},
    DOI = {10.3791/52296},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84921652879&doi=10.3791%2f52296&partnerID=40&md5=a500e4b2531e752db0f4317885f06b55},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] S. Srinivasan, W. R. Cluett, and R. Mahadevan, “Constructing kinetic models of metabolism at genome-scales: a review,” Biotechnology journal, vol. 10, iss. 9, pp. 1345-1359, 2015.
    [Bibtex]
    @article{RN393_2015,
    author = {Srinivasan, S. and Cluett, W. R. and Mahadevan, R.},
    title = {Constructing kinetic models of metabolism at genome-scales: A review},
    journal = {Biotechnology Journal},
    volume = {10},
    number = {9},
    pages = {1345-1359},
    ISSN = {18606768 (ISSN)},
    DOI = {10.1002/biot.201400522},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84940557767&doi=10.1002%2fbiot.201400522&partnerID=40&md5=272df642669276a8914ec718bd5dce4a},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] P. J. Stogios, E. Evdokimova, M. Morar, K. Koteva, G. D. Wright, P. Courvalin, and A. Savchenko, “Structural and functional plasticity of antibiotic resistance nucleotidylyltransferases revealed by molecular characterization of lincosamide nucleotidylyltransferases lnu(a) and lnu(d),” Journal of molecular biology, vol. 427, iss. 12, pp. 2229-2243, 2015.
    [Bibtex]
    @article{RN901_2015,
    author = {Stogios, P. J. and Evdokimova, E. and Morar, M. and Koteva, K. and Wright, G. D. and Courvalin, P. and Savchenko, A.},
    title = {Structural and functional plasticity of antibiotic resistance nucleotidylyltransferases revealed by molecular characterization of lincosamide nucleotidylyltransferases Lnu(A) and Lnu(D)},
    journal = {Journal of Molecular Biology},
    volume = {427},
    number = {12},
    pages = {2229-2243},
    ISSN = {00222836 (ISSN)},
    DOI = {10.1016/j.jmb.2015.04.008},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84937763868&doi=10.1016%2fj.jmb.2015.04.008&partnerID=40&md5=2a565c7a563770be3ef53d0a1bc2f336},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] S. Tabtabaei, D. G. B. Boocock, and L. L. Diosady, “Biodiesel production from mustard emulsion by a combined destabilization/adsorption process,” Jaocs, journal of the american oil chemists’ society, vol. 92, iss. 8, pp. 1205-1217, 2015.
    [Bibtex]
    @article{RN681_2015,
    author = {Tabtabaei, S. and Boocock, D. G. B. and Diosady, L. L.},
    title = {Biodiesel production from mustard emulsion by a combined destabilization/adsorption process},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    volume = {92},
    number = {8},
    pages = {1205-1217},
    ISSN = {0003021X (ISSN)},
    DOI = {10.1007/s11746-015-2677-5},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84938555826&doi=10.1007%2fs11746-015-2677-5&partnerID=40&md5=431f5bcd90d2903dcaffad9e98358b31},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] A. Tchigvintsev, H. Tran, A. Popovic, F. Kovacic, G. Brown, R. Flick, M. Hajighasemi, O. Egorova, J. C. Somody, D. Tchigvintsev, A. Khusnutdinova, T. N. Chernikova, O. V. Golyshina, M. M. Yakimov, A. Savchenko, P. N. Golyshin, K. E. Jaeger, and A. F. Yakunin, “The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes,” Applied microbiology and biotechnology, vol. 99, iss. 5, pp. 2165-2178, 2015.
    [Bibtex]
    @article{RN789_2015,
    author = {Tchigvintsev, A. and Tran, H. and Popovic, A. and Kovacic, F. and Brown, G. and Flick, R. and Hajighasemi, M. and Egorova, O. and Somody, J. C. and Tchigvintsev, D. and Khusnutdinova, A. and Chernikova, T. N. and Golyshina, O. V. and Yakimov, M. M. and Savchenko, A. and Golyshin, P. N. and Jaeger, K. E. and Yakunin, A. F.},
    title = {The environment shapes microbial enzymes: Five cold-active and salt-resistant carboxylesterases from marine metagenomes},
    journal = {Applied Microbiology and Biotechnology},
    volume = {99},
    number = {5},
    pages = {2165-2178},
    ISSN = {01757598 (ISSN)},
    DOI = {10.1007/s00253-014-6038-3},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84923261245&doi=10.1007%2fs00253-014-6038-3&partnerID=40&md5=e167e38b85ce4a60394284dd820bc3de},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] S. Toh, D. Holbrook-Smith, P. J. Stogios, O. Onopriyenko, S. Lumba, Y. Tsuchiya, A. Savchenko, and P. McCourt, “Structure-function analysis identifies highly sensitive strigolactone receptors in striga,” Science, vol. 350, iss. 6257, pp. 203-207, 2015.
    [Bibtex]
    @article{RN898_2015,
    author = {Toh, S. and Holbrook-Smith, D. and Stogios, P. J. and Onopriyenko, O. and Lumba, S. and Tsuchiya, Y. and Savchenko, A. and McCourt, P.},
    title = {Structure-function analysis identifies highly sensitive strigolactone receptors in Striga},
    journal = {Science},
    volume = {350},
    number = {6257},
    pages = {203-207},
    ISSN = {00368075 (ISSN)},
    DOI = {10.1126/science.aac9476},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84943534072&doi=10.1126%2fscience.aac9476&partnerID=40&md5=3ae8921722197862082f36d02a07c523},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] A. Y. L. Tsai, R. E. Goacher, and E. R. Master, “Detecting changes in arabidopsis cell wall composition using time-of-flight secondary ion mass spectrometry,” Surface and interface analysis, vol. 47, iss. 5, pp. 626-631, 2015.
    [Bibtex]
    @article{RN334_2015,
    author = {Tsai, A. Y. L. and Goacher, R. E. and Master, E. R.},
    title = {Detecting changes in Arabidopsis cell wall composition using time-of-flight secondary ion mass spectrometry},
    journal = {Surface and Interface Analysis},
    volume = {47},
    number = {5},
    pages = {626-631},
    ISSN = {01422421 (ISSN)},
    DOI = {10.1002/sia.5756},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84927910963&doi=10.1002%2fsia.5756&partnerID=40&md5=0bf54c911e46fbe3139ffc204719fbc7},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] N. Venayak, N. Anesiadis, W. R. Cluett, and R. Mahadevan, “Engineering metabolism through dynamic control,” Current opinion in biotechnology, vol. 34, pp. 142-152, 2015.
    [Bibtex]
    @article{RN386_2015,
    author = {Venayak, N. and Anesiadis, N. and Cluett, W. R. and Mahadevan, R.},
    title = {Engineering metabolism through dynamic control},
    journal = {Current Opinion in Biotechnology},
    volume = {34},
    pages = {142-152},
    ISSN = {09581669 (ISSN)},
    DOI = {10.1016/j.copbio.2014.12.022},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84921479351&doi=10.1016%2fj.copbio.2014.12.022&partnerID=40&md5=e5e133361b673480ee97b88d7da10f9a},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] J. Wallenius, N. Pahimanolis, J. Zoppe, P. Kilpeläinen, E. Master, H. Ilvesniemi, J. Seppälä, T. Eerikäinen, and H. Ojamo, “Continuous propionic acid production with propionibacterium acidipropionici immobilized in a novel xylan hydrogel matrix,” Bioresource technology, vol. 197, pp. 1-6, 2015.
    [Bibtex]
    @article{RN325_2015,
    author = {Wallenius, J. and Pahimanolis, N. and Zoppe, J. and Kilpeläinen, P. and Master, E. and Ilvesniemi, H. and Seppälä, J. and Eerikäinen, T. and Ojamo, H.},
    title = {Continuous propionic acid production with Propionibacterium acidipropionici immobilized in a novel xylan hydrogel matrix},
    journal = {Bioresource Technology},
    volume = {197},
    pages = {1-6},
    ISSN = {09608524 (ISSN)},
    DOI = {10.1016/j.biortech.2015.08.037},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84939814212&doi=10.1016%2fj.biortech.2015.08.037&partnerID=40&md5=e720adc9f748cb20c17d4ac6ea3c5c0c},
    year = {2015},
    type = {Journal Article}
    }
  • [DOI] L. Yang, S. Srinivasan, R. Mahadevan, and W. R. Cluett, “Characterizing metabolic pathway diversification in the context of perturbation size,” Metabolic engineering, vol. 28, pp. 114-122, 2015.
    [Bibtex]
    @article{RN390_2015,
    author = {Yang, L. and Srinivasan, S. and Mahadevan, R. and Cluett, W. R.},
    title = {Characterizing metabolic pathway diversification in the context of perturbation size},
    journal = {Metabolic Engineering},
    volume = {28},
    pages = {114-122},
    ISSN = {10967176 (ISSN)},
    DOI = {10.1016/j.ymben.2014.11.013},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84921301913&doi=10.1016%2fj.ymben.2014.11.013&partnerID=40&md5=44ef76b4bebd8a5e82c86cba04376157},
    year = {2015},
    type = {Journal Article}
    }

2014

  • [DOI] Y. Azimi, D. G. Allen, and R. R. Farnood, “Enhancing disinfection by advanced oxidation under uv irradiation in polyphosphate-containing wastewater flocs,” Water research, vol. 54, pp. 179-187, 2014.
    [Bibtex]
    @article{RN598_2014,
    author = {Azimi, Y. and Allen, D. G. and Farnood, R. R.},
    title = {Enhancing disinfection by advanced oxidation under UV irradiation in polyphosphate-containing wastewater flocs},
    journal = {Water Research},
    volume = {54},
    pages = {179-187},
    ISSN = {00431354 (ISSN)},
    DOI = {10.1016/j.watres.2014.01.011},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84894386519&doi=10.1016%2fj.watres.2014.01.011&partnerID=40&md5=e83426f4ccd40b186626c7891ae8ade6},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] Y. Azimi, D. G. Allen, P. Seto, and R. Farnood, “Effect of activated sludge retention time, operating temperature, and influent phosphorus deficiency on floc physicochemical characteristics and uv disinfection,” Industrial and engineering chemistry research, vol. 53, iss. 31, pp. 12485-12493, 2014.
    [Bibtex]
    @article{RN597_2014,
    author = {Azimi, Y. and Allen, D. G. and Seto, P. and Farnood, R.},
    title = {Effect of activated sludge retention time, operating temperature, and influent phosphorus deficiency on floc physicochemical characteristics and UV disinfection},
    journal = {Industrial and Engineering Chemistry Research},
    volume = {53},
    number = {31},
    pages = {12485-12493},
    ISSN = {08885885 (ISSN)},
    DOI = {10.1021/ie5012068},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84905674377&doi=10.1021%2fie5012068&partnerID=40&md5=07895e5061edbe71e10069f15c20b8c9},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] J. Bajor, K. L. Tkaczuk, M. Chruszcz, H. Chapman, O. Kagan, A. Savchenko, and W. Minor, “The crystal structure of pyrimidine/thiamin biosynthesis precursor-like domain-containing protein cae31940 from proteobacterium bordetella bronchiseptica rb50, and evolutionary insight into the nmt1/thi5 family,” Journal of structural and functional genomics, vol. 15, iss. 2, pp. 73-81, 2014.
    [Bibtex]
    @article{RN919_2014,
    author = {Bajor, J. and Tkaczuk, K. L. and Chruszcz, M. and Chapman, H. and Kagan, O. and Savchenko, A. and Minor, W.},
    title = {The crystal structure of pyrimidine/thiamin biosynthesis precursor-like domain-containing protein CAE31940 from proteobacterium Bordetella bronchiseptica RB50, and evolutionary insight into the NMT1/THI5 family},
    journal = {Journal of Structural and Functional Genomics},
    volume = {15},
    number = {2},
    pages = {73-81},
    ISSN = {1345711X (ISSN)},
    DOI = {10.1007/s10969-014-9180-3},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84904063577&doi=10.1007%2fs10969-014-9180-3&partnerID=40&md5=61d99b8bb7bba53e983b219833c76e33},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] N. Bourdakos, E. Marsili, and R. Mahadevan, “A defined co-culture of geobacter sulfurreducens and escherichia coli in a membrane-less microbial fuel cell,” Biotechnology and bioengineering, vol. 111, iss. 4, pp. 709-718, 2014.
    [Bibtex]
    @article{RN399_2014,
    author = {Bourdakos, N. and Marsili, E. and Mahadevan, R.},
    title = {A defined co-culture of Geobacter sulfurreducens and Escherichia coli in a membrane-less microbial fuel cell},
    journal = {Biotechnology and Bioengineering},
    volume = {111},
    number = {4},
    pages = {709-718},
    ISSN = {00063592 (ISSN)},
    DOI = {10.1002/bit.25137},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84894282258&doi=10.1002%2fbit.25137&partnerID=40&md5=1ee2cd44fbfd26b5d4898aafe4afd0c5},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] N. Bourdakos, E. Marsili, and R. Mahadevan, “A defined co-culture of geobacter sulfurreducens and escherichia coli in a membrane-less microbial fuel cell,” Biotechnol bioeng, vol. 111, iss. 4, pp. 709-18, 2014.
    [Bibtex]
    @article{RN1077_2014,
    author = {Bourdakos, N. and Marsili, E. and Mahadevan, R.},
    title = {A defined co-culture of Geobacter sulfurreducens and Escherichia coli in a membrane-less microbial fuel cell},
    journal = {Biotechnol Bioeng},
    volume = {111},
    number = {4},
    pages = {709-18},
    ISSN = {1097-0290 (Electronic) 0006-3592 (Linking)},
    DOI = {10.1002/bit.25137},
    url = {http://www.ncbi.nlm.nih.gov/pubmed/24155100},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] C. Chen, J. C. Joo, G. Brown, E. Stolnikova, A. S. Halavaty, A. Savchenko, W. F. Anderson, and A. F. Yakunin, “Structure-based mutational studies of substrate inhibition of betaine aldehyde dehydrogenase betb from staphylococcus aureus,” Applied and environmental microbiology, vol. 80, iss. 13, pp. 3992-4002, 2014.
    [Bibtex]
    @article{RN794_2014,
    author = {Chen, C. and Joo, J. C. and Brown, G. and Stolnikova, E. and Halavaty, A. S. and Savchenko, A. and Anderson, W. F. and Yakunin, A. F.},
    title = {Structure-based mutational studies of substrate inhibition of betaine aldehyde dehydrogenase BetB from Staphylococcus aureus},
    journal = {Applied and Environmental Microbiology},
    volume = {80},
    number = {13},
    pages = {3992-4002},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.00215-14},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84902132974&doi=10.1128%2fAEM.00215-14&partnerID=40&md5=661067980e5a5006c0fa23ee2ccbcb91},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] E. A. Edwards, “Breathing the unbreathable,” Science, vol. 346, iss. 6208, pp. 424-425, 2014.
    [Bibtex]
    @article{RN209_2014,
    author = {Edwards, E. A.},
    title = {Breathing the unbreathable},
    journal = {Science},
    volume = {346},
    number = {6208},
    pages = {424-425},
    ISSN = {00368075 (ISSN)},
    DOI = {10.1126/science.1261194},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84908237145&doi=10.1126%2fscience.1261194&partnerID=40&md5=8c96b379a8eb696d42376096b1fcd8d7},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] A. Eletsky, K. Michalska, S. Houliston, Q. Zhang, M. D. Daily, X. Xu, H. Cui, A. Yee, A. Lemak, B. Wu, M. Garcia, M. C. Burnet, K. M. Meyer, U. K. Aryal, O. Sanchez, C. Ansong, R. Xiao, T. B. Acton, J. N. Adkins, G. T. Montelione, A. Joachimiak, C. H. Arrowsmith, A. Savchenko, T. Szyperski, and J. R. Cort, “Structural and functional characterization of duf1471 domains of salmonella proteins srfn, ydgh/sssb, and yaho,” Plos one, vol. 9, iss. 7, 2014.
    [Bibtex]
    @article{RN913_2014,
    author = {Eletsky, A. and Michalska, K. and Houliston, S. and Zhang, Q. and Daily, M. D. and Xu, X. and Cui, H. and Yee, A. and Lemak, A. and Wu, B. and Garcia, M. and Burnet, M. C. and Meyer, K. M. and Aryal, U. K. and Sanchez, O. and Ansong, C. and Xiao, R. and Acton, T. B. and Adkins, J. N. and Montelione, G. T. and Joachimiak, A. and Arrowsmith, C. H. and Savchenko, A. and Szyperski, T. and Cort, J. R.},
    title = {Structural and functional characterization of DUF1471 domains of Salmonella proteins SrfN, YdgH/SssB, and YahO},
    journal = {PLoS ONE},
    volume = {9},
    number = {7},
    ISSN = {19326203 (ISSN)},
    DOI = {10.1371/journal.pone.0101787},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84904258220&doi=10.1371%2fjournal.pone.0101787&partnerID=40&md5=62ac60b90e9c205225a8501118719d6e},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] A. Eshaghi, S. Shalhoub, P. Rosenfeld, A. Li, R. R. Higgins, P. J. Stogios, A. Savchenko, N. Bastien, Y. Li, C. Rotstein, and J. B. Gubbaya, “Multiple influenza a (h3n2) mutations conferring resistance to neuraminidase inhibitors in a bone marrow transplant recipient,” Antimicrobial agents and chemotherapy, vol. 58, iss. 12, pp. 7188-7197, 2014.
    [Bibtex]
    @article{RN1030_2014,
    author = {Eshaghi, A. and Shalhoub, S. and Rosenfeld, P. and Li, A. and Higgins, R. R. and Stogios, P. J. and Savchenko, A. and Bastien, N. and Li, Y. and Rotstein, C. and Gubbaya, J. B.},
    title = {Multiple influenza a (H3N2) mutations conferring resistance to neuraminidase inhibitors in a bone marrow transplant recipient},
    journal = {Antimicrobial Agents and Chemotherapy},
    volume = {58},
    number = {12},
    pages = {7188-7197},
    ISSN = {00664804 (ISSN)},
    DOI = {10.1128/AAC.03667-14},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84912058790&doi=10.1128%2fAAC.03667-14&partnerID=40&md5=5471385ea297a397dc9aaac3e0879a00},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] E. V. Filippova, K. L. Tkaczuk, M. Chruszcz, X. Xu, A. Savchenko, A. Edwards, and W. Minor, “Structural characterization of the putative abc-type 2 transporter from thermotoga maritima msb8,” Journal of structural and functional genomics, vol. 15, iss. 4, pp. 215-222, 2014.
    [Bibtex]
    @article{RN920_2014,
    author = {Filippova, E. V. and Tkaczuk, K. L. and Chruszcz, M. and Xu, X. and Savchenko, A. and Edwards, A. and Minor, W.},
    title = {Structural characterization of the putative ABC-type 2 transporter from Thermotoga maritima MSB8},
    journal = {Journal of Structural and Functional Genomics},
    volume = {15},
    number = {4},
    pages = {215-222},
    ISSN = {1345711X (ISSN)},
    DOI = {10.1007/s10969-014-9189-7},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84911959945&doi=10.1007%2fs10969-014-9189-7&partnerID=40&md5=4e95130c04637818b39f93eb0c787083},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] P. Gawand and R. Mahadevan, “Engineering escherichia coli for d-ribose production from glucose-xylose mixtures,” Industrial biotechnology, vol. 10, iss. 2, pp. 106-114, 2014.
    [Bibtex]
    @article{RN397_2014,
    author = {Gawand, P. and Mahadevan, R.},
    title = {Engineering Escherichia coli for D-ribose production from glucose-xylose mixtures},
    journal = {Industrial Biotechnology},
    volume = {10},
    number = {2},
    pages = {106-114},
    ISSN = {15509087 (ISSN)},
    DOI = {10.1089/ind.2013.0028},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84898909919&doi=10.1089%2find.2013.0028&partnerID=40&md5=15a3db6920cfb233f7fa232c58d88f90},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] R. E. Goacher, M. J. Selig, and E. R. Master, “Advancing lignocellulose bioconversion through direct assessment of enzyme action on insoluble substrates,” Current opinion in biotechnology, vol. 27, pp. 123-133, 2014.
    [Bibtex]
    @article{RN339_2014,
    author = {Goacher, R. E. and Selig, M. J. and Master, E. R.},
    title = {Advancing lignocellulose bioconversion through direct assessment of enzyme action on insoluble substrates},
    journal = {Current Opinion in Biotechnology},
    volume = {27},
    pages = {123-133},
    ISSN = {09581669 (ISSN)},
    DOI = {10.1016/j.copbio.2014.01.009},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84896722084&doi=10.1016%2fj.copbio.2014.01.009&partnerID=40&md5=3fa9d87ab1150fa4d1f2397d44238d3a},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] R. E. Goacher, M. J. Selig, and E. R. Master, “Advancing lignocellulose bioconversion through direct assessment of enzyme action on insoluble substrates,” Curr opin biotechnol, vol. 27, pp. 123-33, 2014.
    [Bibtex]
    @article{RN1079_2014,
    author = {Goacher, R. E. and Selig, M. J. and Master, E. R.},
    title = {Advancing lignocellulose bioconversion through direct assessment of enzyme action on insoluble substrates},
    journal = {Curr Opin Biotechnol},
    volume = {27},
    pages = {123-33},
    ISSN = {1879-0429 (Electronic) 0958-1669 (Linking)},
    DOI = {10.1016/j.copbio.2014.01.009},
    url = {http://www.ncbi.nlm.nih.gov/pubmed/24525082},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] A. S. Halavaty, S. M. Anderson, Z. Wawrzak, M. Kudritska, T. Skarina, W. F. Anderson, and A. Savchenko, “Type iii effector nleh2 from escherichia coli o157:h7 str. sakai features an atypical protein kinase domain,” Biochemistry, vol. 53, iss. 15, pp. 2433-2435, 2014.
    [Bibtex]
    @article{RN917_2014,
    author = {Halavaty, A. S. and Anderson, S. M. and Wawrzak, Z. and Kudritska, M. and Skarina, T. and Anderson, W. F. and Savchenko, A.},
    title = {Type III effector NleH2 from Escherichia coli O157:H7 str. Sakai features an atypical protein kinase domain},
    journal = {Biochemistry},
    volume = {53},
    number = {15},
    pages = {2433-2435},
    ISSN = {00062960 (ISSN)},
    DOI = {10.1021/bi500016j},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84899449471&doi=10.1021%2fbi500016j&partnerID=40&md5=9a67b28f07f6fd9140d8bc677698d869},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] C. Hori, T. Ishida, K. Igarashi, M. Samejima, H. Suzuki, E. Master, P. Ferreira, F. J. Ruiz-Dueñas, B. Held, P. Canessa, L. F. Larrondo, M. Schmoll, I. S. Druzhinina, C. P. Kubicek, J. A. Gaskell, P. Kersten, F. St. John, J. Glasner, G. Sabat, S. Splinter BonDurant, K. Syed, J. Yadav, A. C. Mgbeahuruike, A. Kovalchuk, F. O. Asiegbu, G. Lackner, D. Hoffmeister, J. Rencoret, A. Gutiérrez, H. Sun, E. Lindquist, K. Barry, R. Riley, I. V. Grigoriev, B. Henrissat, U. Kües, R. M. Berka, A. T. Martínez, S. F. Covert, R. A. Blanchette, and D. Cullen, “Analysis of the phlebiopsis gigantea genome, transcriptome and secretome provides insight into its pioneer colonization strategies of wood,” Plos genetics, vol. 10, iss. 12, 2014.
    [Bibtex]
    @article{RN343_2014,
    author = {Hori, C. and Ishida, T. and Igarashi, K. and Samejima, M. and Suzuki, H. and Master, E. and Ferreira, P. and Ruiz-Dueñas, F. J. and Held, B. and Canessa, P. and Larrondo, L. F. and Schmoll, M. and Druzhinina, I. S. and Kubicek, C. P. and Gaskell, J. A. and Kersten, P. and St. John, F. and Glasner, J. and Sabat, G. and Splinter BonDurant, S. and Syed, K. and Yadav, J. and Mgbeahuruike, A. C. and Kovalchuk, A. and Asiegbu, F. O. and Lackner, G. and Hoffmeister, D. and Rencoret, J. and Gutiérrez, A. and Sun, H. and Lindquist, E. and Barry, K. and Riley, R. and Grigoriev, I. V. and Henrissat, B. and Kües, U. and Berka, R. M. and Martínez, A. T. and Covert, S. F. and Blanchette, R. A. and Cullen, D.},
    title = {Analysis of the Phlebiopsis gigantea Genome, Transcriptome and Secretome Provides Insight into Its Pioneer Colonization Strategies of Wood},
    journal = {PLoS Genetics},
    volume = {10},
    number = {12},
    ISSN = {15537390 (ISSN)},
    DOI = {10.1371/journal.pgen.1004759},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84919682712&doi=10.1371%2fjournal.pgen.1004759&partnerID=40&md5=d82c7237315a966c2ef957c5d38dfcc4},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] C. N. Hoyland, C. Aldridge, R. M. Cleverley, M. C. Duchêne, G. Minasov, O. Onopriyenko, K. Sidiq, P. J. Stogios, W. F. Anderson, R. A. Daniel, A. Savchenko, W. Vollmer, and R. J. Lewis, “Structure of the ldcb ld-carboxypeptidase reveals the molecular basis of peptidoglycan recognition,” Structure, vol. 22, iss. 7, pp. 949-960, 2014.
    [Bibtex]
    @article{RN914_2014,
    author = {Hoyland, C. N. and Aldridge, C. and Cleverley, R. M. and Duchêne, M. C. and Minasov, G. and Onopriyenko, O. and Sidiq, K. and Stogios, P. J. and Anderson, W. F. and Daniel, R. A. and Savchenko, A. and Vollmer, W. and Lewis, R. J.},
    title = {Structure of the LdcB LD-carboxypeptidase reveals the molecular basis of peptidoglycan recognition},
    journal = {Structure},
    volume = {22},
    number = {7},
    pages = {949-960},
    ISSN = {09692126 (ISSN)},
    DOI = {10.1016/j.str.2014.04.015},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84904103328&doi=10.1016%2fj.str.2014.04.015&partnerID=40&md5=580eba134d85489ab4eab1987f406af3},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] M. A. Islam, A. S. Waller, L. A. Hug, N. J. Provart, E. A. Edwards, and R. Mahadevan, “New insights into dehalococcoides mccartyi metabolism from a reconstructed metabolic network-based systems-level analysis of d. mccartyi transcriptomes,” Plos one, vol. 9, iss. 4, 2014.
    [Bibtex]
    @article{RN211_2014,
    author = {Islam, M. A. and Waller, A. S. and Hug, L. A. and Provart, N. J. and Edwards, E. A. and Mahadevan, R.},
    title = {New insights into Dehalococcoides mccartyi metabolism from a reconstructed metabolic network-based systems-level analysis of D. mccartyi transcriptomes},
    journal = {PLoS ONE},
    volume = {9},
    number = {4},
    ISSN = {19326203 (ISSN)},
    DOI = {10.1371/journal.pone.0094808
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    [Bibtex]
    @article{RN398_2014,
    author = {Jayasinghe, N. and Franks, A. and Nevin, K. P. and Mahadevan, R.},
    title = {Metabolic modeling of spatial heterogeneity of biofilms in microbial fuel cells reveals substrate limitations in electrical current generation},
    journal = {Biotechnology Journal},
    volume = {9},
    number = {10},
    pages = {1350-1361},
    ISSN = {18606768 (ISSN)},
    DOI = {10.1002/biot.201400068},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84908465818&doi=10.1002%2fbiot.201400068&partnerID=40&md5=966df8e99b5a6ff38b869fee7d713768},
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    [Bibtex]
    @article{RN340_2014,
    author = {Jeremic, D. and Goacher, R. E. and Yan, R. and Karunakaran, C. and Master, E. R.},
    title = {Direct and up-close views of plant cell walls show a leading role for lignin-modifying enzymes on ensuing xylanases},
    journal = {Biotechnology for Biofuels},
    volume = {7},
    number = {1},
    ISSN = {17546834 (ISSN)},
    DOI = {10.1186/s13068-014-0176-9},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84924156036&doi=10.1186%2fs13068-014-0176-9&partnerID=40&md5=ef48ff3a325996cdb1c51f3d03c89517},
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    [Bibtex]
    @article{RN212_2014,
    author = {Justicia-Leon, S. D. and Higgins, S. and Mack, E. E. and Griffiths, D. R. and Tang, S. and Edwards, E. A. and Löffler, F. E.},
    title = {Bioaugmentation with distinct Dehalobacter strains achieves chloroform detoxification in microcosms},
    journal = {Environmental Science and Technology},
    volume = {48},
    number = {3},
    pages = {1851-1858},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/es403582f},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84893624362&doi=10.1021%2fes403582f&partnerID=40&md5=f149c0a2588d339fe026b07494ff0d03},
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    [Bibtex]
    @article{RN341_2014,
    author = {Karuna, N. and Zhang, L. and Walton, J. H. and Couturier, M. and Oztop, M. H. and Master, E. R. and McCarthy, M. J. and Jeoh, T.},
    title = {The impact of alkali pretreatment and post-pretreatment conditioning on the surface properties of rice straw affecting cellulose accessibility to cellulases},
    journal = {Bioresource Technology},
    volume = {167},
    pages = {232-240},
    ISSN = {09608524 (ISSN)},
    DOI = {10.1016/j.biortech.2014.05.122},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84903484247&doi=10.1016%2fj.biortech.2014.05.122&partnerID=40&md5=751bf845ccdf6dbec4ad75d70cc057f2},
    year = {2014},
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    [Bibtex]
    @article{RN1078_2014,
    author = {Kim, M. S. and Pinto, S. M. and Getnet, D. and Nirujogi, R. S. and Manda, S. S. and Chaerkady, R. and Madugundu, A. K. and Kelkar, D. S. and Isserlin, R. and Jain, S. and Thomas, J. K. and Muthusamy, B. and Leal-Rojas, P. and Kumar, P. and Sahasrabuddhe, N. A. and Balakrishnan, L. and Advani, J. and George, B. and Renuse, S. and Selvan, L. D. and Patil, A. H. and Nanjappa, V. and Radhakrishnan, A. and Prasad, S. and Subbannayya, T. and Raju, R. and Kumar, M. and Sreenivasamurthy, S. K. and Marimuthu, A. and Sathe, G. J. and Chavan, S. and Datta, K. K. and Subbannayya, Y. and Sahu, A. and Yelamanchi, S. D. and Jayaram, S. and Rajagopalan, P. and Sharma, J. and Murthy, K. R. and Syed, N. and Goel, R. and Khan, A. A. and Ahmad, S. and Dey, G. and Mudgal, K. and Chatterjee, A. and Huang, T. C. and Zhong, J. and Wu, X. and Shaw, P. G. and Freed, D. and Zahari, M. S. and Mukherjee, K. K. and Shankar, S. and Mahadevan, A. and Lam, H. and Mitchell, C. J. and Shankar, S. K. and Satishchandra, P. and Schroeder, J. T. and Sirdeshmukh, R. and Maitra, A. and Leach, S. D. and Drake, C. G. and Halushka, M. K. and Prasad, T. S. and Hruban, R. H. and Kerr, C. L. and Bader, G. D. and Iacobuzio-Donahue, C. A. and Gowda, H. and Pandey, A.},
    title = {A draft map of the human proteome},
    journal = {Nature},
    volume = {509},
    number = {7502},
    pages = {575-81},
    ISSN = {1476-4687 (Electronic) 0028-0836 (Linking)},
    DOI = {10.1038/nature13302},
    url = {http://www.ncbi.nlm.nih.gov/pubmed/24870542},
    year = {2014},
    type = {Journal Article}
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    [Bibtex]
    @article{RN337_2014,
    author = {Latha Gandla, M. and Derba-Maceluch, M. and Liu, X. and Gerber, L. and Master, E. R. and Mellerowicz, E. J. and Jönsson, L. J.},
    title = {Expression of a fungal glucuronoyl esterase in Populus: Effects on wood properties and saccharification efficiency},
    journal = {Phytochemistry},
    volume = {112},
    pages = {210-220},
    ISSN = {00319422 (ISSN)},
    DOI = {10.1016/j.phytochem.2014.06.002},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84903420130&doi=10.1016%2fj.phytochem.2014.06.002&partnerID=40&md5=04c961a00da01a092948bf22689c3611},
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    [Bibtex]
    @article{RN793_2014,
    author = {Lemak, S. and Nocek, B. and Beloglazova, N. and Skarina, T. and Flick, R. and Brown, G. and Joachimiak, A. and Savchenko, A. and Yakunin, A. F.},
    title = {The CRISPR-associated Cas4 protein Pcal 0546 from Pyrobaculum calidifontis contains a [2Fe-2S] cluster: Crystal structure and nuclease activity},
    journal = {Nucleic Acids Research},
    volume = {42},
    number = {17},
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    ISSN = {03051048 (ISSN)},
    DOI = {10.1093/nar/gku797},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84945540442&doi=10.1093%2fnar%2fgku797&partnerID=40&md5=f673db4e56f8bba22584c2b78326fb01},
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    [Bibtex]
    @article{RN490_2014,
    author = {Londono, C. and Loureiro, M. J. and Slater, B. and Lücker, P. B. and Soleas, J. and Sathananthan, S. and Aitchison, J. S. and Kabla, A. J. and McGuigan, A. P.},
    title = {Nonautonomous contact guidance signaling during collective cell migration},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    volume = {111},
    number = {5},
    pages = {1807-1812},
    ISSN = {00278424 (ISSN)},
    DOI = {10.1073/pnas.1321852111},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84893447129&doi=10.1073%2fpnas.1321852111&partnerID=40&md5=b6b358aca715d154b312fbe3dee66e94},
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    [Bibtex]
    @article{RN918_2014,
    author = {Loza-Correa, M. and Sahr, T. and Rolando, M. and Daniels, C. and Petit, P. and Skarina, T. and Gomez Valero, L. and Dervins-Ravault, D. and Honoré, N. and Savchenko, A. and Buchrieser, C.},
    title = {The Legionella pneumophila kai operon is implicated in stress response and confers fitness in competitive environments},
    journal = {Environmental Microbiology},
    volume = {16},
    number = {2},
    pages = {359-381},
    ISSN = {14622912 (ISSN)},
    DOI = {10.1111/1462-2920.12223},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84892958675&doi=10.1111%2f1462-2920.12223&partnerID=40&md5=7ed647c71583fa8c69fcc5c822e3ad75},
    year = {2014},
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    @article{RN487_2014,
    author = {Lücker, P. B. and Javaherian, S. and Soleas, J. P. and Halverson, D. and Zandstra, P. W. and McGuigan, A. P.},
    title = {A microgroove patterned multiwell cell culture plate for high-throughput studies of cell alignment},
    journal = {Biotechnology and Bioengineering},
    volume = {111},
    number = {12},
    pages = {2537-2548},
    ISSN = {00063592 (ISSN)},
    DOI = {10.1002/bit.25298},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84918789587&doi=10.1002%2fbit.25298&partnerID=40&md5=ea88e363933e1f59cd709a3444ac5cfd},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] F. Luo, R. Gitiafroz, C. E. Devine, Y. Gong, L. A. Hug, L. Raskin, and E. A. Edwards, “Metatranscriptome of an anaerobic benzene-degrading, nitrate-reducing enrichment culture reveals involvement of carboxylation in benzene ring activation,” Applied and environmental microbiology, vol. 80, iss. 14, pp. 4095-4107, 2014.
    [Bibtex]
    @article{RN213_2014,
    author = {Luo, F. and Gitiafroz, R. and Devine, C. E. and Gong, Y. and Hug, L. A. and Raskin, L. and Edwards, E. A.},
    title = {Metatranscriptome of an anaerobic benzene-degrading, nitrate-reducing enrichment culture reveals involvement of carboxylation in benzene ring activation},
    journal = {Applied and Environmental Microbiology},
    volume = {80},
    number = {14},
    pages = {4095-4107},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.00717-14},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84903134555&doi=10.1128%2fAEM.00717-14&partnerID=40&md5=d0ea02d53abb77523a58283d5618e5c9},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] T. Meyer and E. A. Edwards, “Anaerobic digestion of pulp and paper mill wastewater and sludge,” Water research, vol. 65, pp. 321-349, 2014.
    [Bibtex]
    @article{RN208_2014,
    author = {Meyer, T. and Edwards, E. A.},
    title = {Anaerobic digestion of pulp and paper mill wastewater and sludge},
    journal = {Water Research},
    volume = {65},
    pages = {321-349},
    ISSN = {00431354 (ISSN)},
    DOI = {10.1016/j.watres.2014.07.022},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84906270487&doi=10.1016%2fj.watres.2014.07.022&partnerID=40&md5=5f49473c7398f53c005c91ea3ba884ba},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] D. Meziane-Cherif, P. J. Stogios, E. Evdokimova, A. Savchenko, and P. Courvalin, “Structural basis for the evolution of vancomycin resistance d,d-peptidases,” Proceedings of the national academy of sciences of the united states of america, vol. 111, iss. 16, pp. 5872-5877, 2014.
    [Bibtex]
    @article{RN916_2014,
    author = {Meziane-Cherif, D. and Stogios, P. J. and Evdokimova, E. and Savchenko, A. and Courvalin, P.},
    title = {Structural basis for the evolution of vancomycin resistance D,D-peptidases},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    volume = {111},
    number = {16},
    pages = {5872-5877},
    ISSN = {00278424 (ISSN)},
    DOI = {10.1073/pnas.1402259111},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84899110665&doi=10.1073%2fpnas.1402259111&partnerID=40&md5=4e8091660ee4fbe2b6e17f07542c00d2},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] A. C. Paz, J. Soleas, J. C. H. Poon, D. Trieu, T. K. Waddell, and A. P. McGuigan, “Challenges and opportunities for tissue-engineering polarized epithelium,” Tissue engineering – part b: reviews, vol. 20, iss. 1, pp. 56-72, 2014.
    [Bibtex]
    @article{RN491_2014,
    author = {Paz, A. C. and Soleas, J. and Poon, J. C. H. and Trieu, D. and Waddell, T. K. and McGuigan, A. P.},
    title = {Challenges and opportunities for tissue-engineering polarized epithelium},
    journal = {Tissue Engineering - Part B: Reviews},
    volume = {20},
    number = {1},
    pages = {56-72},
    ISSN = {19373368 (ISSN)},
    DOI = {10.1089/ten.teb.2013.0144},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84893557502&doi=10.1089%2ften.teb.2013.0144&partnerID=40&md5=b6f3d0b4940c98989b6b5b90abbfad26},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] A. Pérez-De-Mora, A. Zila, M. L. McMaster, and E. A. Edwards, “Bioremediation of chlorinated ethenes in fractured bedrock and associated changes in dechlorinating and nondechlorinating microbial populations,” Environmental science and technology, vol. 48, iss. 10, pp. 5770-5779, 2014.
    [Bibtex]
    @article{RN210_2014,
    author = {Pérez-De-Mora, A. and Zila, A. and McMaster, M. L. and Edwards, E. A.},
    title = {Bioremediation of chlorinated ethenes in fractured bedrock and associated changes in dechlorinating and nondechlorinating microbial populations},
    journal = {Environmental Science and Technology},
    volume = {48},
    number = {10},
    pages = {5770-5779},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/es404122y},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84901020322&doi=10.1021%2fes404122y&partnerID=40&md5=dc76e3d6301420d14cba1472a6073af3},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] M. Pourbafrani, J. McKechnie, T. Shen, B. A. Saville, and H. L. Maclean, “Impacts of pre-treatment technologies and co-products on greenhouse gas emissions and energy use of lignocellulosic ethanol production,” Journal of cleaner production, vol. 78, pp. 104-111, 2014.
    [Bibtex]
    @article{RN641_2014,
    author = {Pourbafrani, M. and McKechnie, J. and Shen, T. and Saville, B. A. and Maclean, H. L.},
    title = {Impacts of pre-treatment technologies and co-products on greenhouse gas emissions and energy use of lignocellulosic ethanol production},
    journal = {Journal of Cleaner Production},
    volume = {78},
    pages = {104-111},
    ISSN = {09596526 (ISSN)},
    DOI = {10.1016/j.jclepro.2014.04.050},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84904249098&doi=10.1016%2fj.jclepro.2014.04.050&partnerID=40&md5=c60ad9367fb553747b5ea47358a33b2d},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] N. Prapakornwiriya and L. L. Diosady, “Recovery of sinapic acid from the waste effluent of mustard protein isolation by ion exchange chromatography,” Jaocs, journal of the american oil chemists’ society, vol. 91, iss. 2, pp. 357-362, 2014.
    [Bibtex]
    @article{RN684_2014,
    author = {Prapakornwiriya, N. and Diosady, L. L.},
    title = {Recovery of sinapic acid from the waste effluent of mustard protein isolation by ion exchange chromatography},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    volume = {91},
    number = {2},
    pages = {357-362},
    ISSN = {0003021X (ISSN)},
    DOI = {10.1007/s11746-013-2366-1},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84893874895&doi=10.1007%2fs11746-013-2366-1&partnerID=40&md5=db0bafb959cd6ecfce3a1f261ba622e0},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] P. J. Schnurr, G. S. Espie, and D. G. Allen, “The effect of light direction and suspended cell concentrations on algal biofilm growth rates,” Applied microbiology and biotechnology, vol. 98, iss. 20, pp. 8553-8562, 2014.
    [Bibtex]
    @article{RN526_2014,
    author = {Schnurr, P. J. and Espie, G. S. and Allen, D. G.},
    title = {The effect of light direction and suspended cell concentrations on algal biofilm growth rates},
    journal = {Applied Microbiology and Biotechnology},
    volume = {98},
    number = {20},
    pages = {8553-8562},
    ISSN = {01757598 (ISSN)},
    DOI = {10.1007/s00253-014-5964-4},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84919913856&doi=10.1007%2fs00253-014-5964-4&partnerID=40&md5=4663d3ed4533c329b4ac868ead4875a0},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] S. Sinichi and L. L. Diosady, “Isopropyl alcohol extraction of de-hulled tellow mustard flour,” Jaocs, journal of the american oil chemists’ society, vol. 91, iss. 12, pp. 2143-2153, 2014.
    [Bibtex]
    @article{RN683_2014,
    author = {Sinichi, S. and Diosady, L. L.},
    title = {Isopropyl alcohol extraction of de-hulled tellow mustard flour},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    volume = {91},
    number = {12},
    pages = {2143-2153},
    ISSN = {0003021X (ISSN)},
    DOI = {10.1007/s11746-014-2556-5},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84925488764&doi=10.1007%2fs11746-014-2556-5&partnerID=40&md5=9be08b7b6f4161bab357c1a9b281a320},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] P. J. Stogios, M. L. Kuhn, E. Evdokimova, P. Courvalin, W. F. Anderson, and A. Savchenko, “Potential for reduction of streptogramin a resistance revealed by structural analysis of acetyltransferase vata,” Antimicrobial agents and chemotherapy, vol. 58, iss. 12, pp. 7083-7092, 2014.
    [Bibtex]
    @article{RN912_2014,
    author = {Stogios, P. J. and Kuhn, M. L. and Evdokimova, E. and Courvalin, P. and Anderson, W. F. and Savchenko, A.},
    title = {Potential for reduction of streptogramin a resistance revealed by structural analysis of acetyltransferase VatA},
    journal = {Antimicrobial Agents and Chemotherapy},
    volume = {58},
    number = {12},
    pages = {7083-7092},
    ISSN = {00664804 (ISSN)},
    DOI = {10.1128/AAC.03743-14},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84912535991&doi=10.1128%2fAAC.03743-14&partnerID=40&md5=908d25f847104d80af3263acf98554df},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] H. Suzuki, T. V. Vuong, Y. Gong, K. Chan, C. Y. Ho, E. R. Master, and A. Kondo, “Sequence diversity and gene expression analyses of expansin-related proteins in the white-rot basidiomycete, phanerochaete carnosa,” Fungal genetics and biology, vol. 72, pp. 115-123, 2014.
    [Bibtex]
    @article{RN336_2014,
    author = {Suzuki, H. and Vuong, T. V. and Gong, Y. and Chan, K. and Ho, C. Y. and Master, E. R. and Kondo, A.},
    title = {Sequence diversity and gene expression analyses of expansin-related proteins in the white-rot basidiomycete, Phanerochaete carnosa},
    journal = {Fungal Genetics and Biology},
    volume = {72},
    pages = {115-123},
    ISSN = {10871845 (ISSN)},
    DOI = {10.1016/j.fgb.2014.05.008},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84908502901&doi=10.1016%2fj.fgb.2014.05.008&partnerID=40&md5=6aa518cbff54549bb47c68183b805f18},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] S. Tabtabaei, D. G. B. Boocock, and L. L. Diosady, “Biodiesel feedstock from emulsions produced by aqueous processing of yellow mustard,” Jaocs, journal of the american oil chemists’ society, vol. 91, iss. 7, pp. 1269-1282, 2014.
    [Bibtex]
    @article{RN685_2014,
    author = {Tabtabaei, S. and Boocock, D. G. B. and Diosady, L. L.},
    title = {Biodiesel feedstock from emulsions produced by aqueous processing of yellow mustard},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    volume = {91},
    number = {7},
    pages = {1269-1282},
    ISSN = {0003021X (ISSN)},
    DOI = {10.1007/s11746-014-2448-8},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84903760584&doi=10.1007%2fs11746-014-2448-8&partnerID=40&md5=af5045008ac89d2951dea8e53ad973aa},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] D. Trieu, T. K. Waddell, and A. P. McGuigan, “A microfluidic device to apply shear stresses to polarizing ciliated airway epithelium using air flow,” Biomicrofluidics, vol. 8, iss. 6, 2014.
    [Bibtex]
    @article{RN488_2014,
    author = {Trieu, D. and Waddell, T. K. and McGuigan, A. P.},
    title = {A microfluidic device to apply shear stresses to polarizing ciliated airway epithelium using air flow},
    journal = {Biomicrofluidics},
    volume = {8},
    number = {6},
    ISSN = {19321058 (ISSN)},
    DOI = {10.1063/1.4901930},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] T. V. Vuong and E. R. Master, “Fusion of a xylan-binding module to gluco- oligosaccharide oxidase increases activity and promotes stable immobilization,” Plos one, vol. 9, iss. 4, 2014.
    [Bibtex]
    @article{RN338_2014,
    author = {Vuong, T. V. and Master, E. R.},
    title = {Fusion of a xylan-binding module to gluco- oligosaccharide oxidase increases activity and promotes stable immobilization},
    journal = {PLoS ONE},
    volume = {9},
    number = {4},
    ISSN = {19326203 (ISSN)},
    DOI = {10.1371/journal.pone.0095170
    103109/104092382014889651},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84899671121&doi=10.1371%2fjournal.pone.0095170&partnerID=40&md5=4d5156ccf8b517ebf14e7042deb02f2c},
    year = {2014},
    type = {Journal Article}
    }
  • [DOI] W. Wang, G. Mai-Gisondi, P. J. Stogios, A. Kaur, X. Xu, H. Cui, O. Turunen, A. Savchenko, and E. R. Master, “Elucidation of the molecular basis for arabinoxylan-debranching activity of a thermostable family gh62 α-l-arabinofuranosidase from streptomyces thermoviolaceus,” Applied and environmental microbiology, vol. 80, iss. 17, pp. 5317-5329, 2014.
    [Bibtex]
    @article{RN342_2014,
    author = {Wang, W. and Mai-Gisondi, G. and Stogios, P. J. and Kaur, A. and Xu, X. and Cui, H. and Turunen, O. and Savchenko, A. and Master, E. R.},
    title = {Elucidation of the molecular basis for arabinoxylan-debranching activity of a thermostable family GH62 α-L-arabinofuranosidase from Streptomyces thermoviolaceus},
    journal = {Applied and Environmental Microbiology},
    volume = {80},
    number = {17},
    pages = {5317-5329},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.00685-14},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84905923793&doi=10.1128%2fAEM.00685-14&partnerID=40&md5=b70306542a1b029affb2ebc062eeb57e},
    year = {2014},
    type = {Journal Article}
    }

2013

  • [DOI] M. Alcaide, J. Tornés, P. J. Stogios, X. Xu, C. Gertler, R. D. I. Leo, R. Bargiela, A. Lafraya, M. E. Guazzaroni, N. López-Cortés, T. N. Chernikova, O. V. Golyshina, T. Y. Nechitaylo, I. Plumeier, D. H. Pieper, M. M. Yakimov, A. Savchenko, P. N. Golyshin, and M. Ferrer, “Single residues dictate the co-evolution of dual esterases: mcp hydrolases from the α/β hydrolase family,” Biochemical journal, vol. 454, iss. 1, pp. 157-166, 2013.
    [Bibtex]
    @article{RN927_2013,
    author = {Alcaide, M. and Tornés, J. and Stogios, P. J. and Xu, X. and Gertler, C. and Leo, R. D. I. and Bargiela, R. and Lafraya, A. and Guazzaroni, M. E. and López-Cortés, N. and Chernikova, T. N. and Golyshina, O. V. and Nechitaylo, T. Y. and Plumeier, I. and Pieper, D. H. and Yakimov, M. M. and Savchenko, A. and Golyshin, P. N. and Ferrer, M.},
    title = {Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the α/β hydrolase family},
    journal = {Biochemical Journal},
    volume = {454},
    number = {1},
    pages = {157-166},
    ISSN = {02646021 (ISSN)},
    DOI = {10.1042/BJ20130552},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84880858205&doi=10.1042%2fBJ20130552&partnerID=40&md5=56a787715315c477b77437b824d5f3e5},
    year = {2013},
    type = {Journal Article}
    }
  • [DOI] N. Anesiadis, H. Kobayashi, W. R. Cluett, and R. Mahadevan, “Analysis and design of a genetic circuit for dynamic metabolic engineering,” Acs synthetic biology, vol. 2, iss. 8, pp. 442-452, 2013.
    [Bibtex]
    @article{RN403_2013,
    author = {Anesiadis, N. and Kobayashi, H. and Cluett, W. R. and Mahadevan, R.},
    title = {Analysis and design of a genetic circuit for dynamic metabolic engineering},
    journal = {ACS Synthetic Biology},
    volume = {2},
    number = {8},
    pages = {442-452},
    ISSN = {21615063 (ISSN)},
    DOI = {10.1021/sb300129j},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84882603873&doi=10.1021%2fsb300129j&partnerID=40&md5=468c2b11d469b0001506841ca4d00b89},
    year = {2013},
    type = {Journal Article}
    }
  • [DOI] B. P. Anton, Y. C. Chang, P. Brown, H. P. Choi, L. L. Faller, J. Guleria, Z. Hu, N. Klitgord, A. Levy-Moonshine, A. Maksad, V. Mazumdar, M. McGettrick, L. Osmani, R. Pokrzywa, J. Rachlin, R. Swaminathan, B. Allen, G. Housman, C. Monahan, K. Rochussen, K. Tao, A. S. Bhagwat, S. E. Brenner, L. Columbus, V. de Crécy-Lagard, D. Ferguson, A. Fomenkov, G. Gadda, R. D. Morgan, A. L. Osterman, D. A. Rodionov, I. A. Rodionova, K. E. Rudd, D. Söll, J. Spain, S. y Xu, A. Bateman, R. M. Blumenthal, J. M. Bollinger, W. S. Chang, M. Ferrer, I. Friedberg, M. Y. Galperin, J. Gobeill, D. Haft, J. Hunt, P. Karp, W. Klimke, C. Krebs, D. Macelis, R. Madupu, M. J. Martin, J. H. Miller, C. O’Donovan, B. Palsson, P. Ruch, A. Setterdahl, G. Sutton, J. Tate, A. Yakunin, D. Tchigvintsev, G. Plata, J. Hu, R. Greiner, D. Horn, K. Sjölander, S. L. Salzberg, D. Vitkup, S. Letovsky, D. Segrè, C. DeLisi, R. J. Roberts, M. Steffen, and S. Kasif, “The combrex project: design, methodology, and initial results,” Plos biology, vol. 11, iss. 8, 2013.
    [Bibtex]
    @article{RN799_2013,
    author = {Anton, B. P. and Chang, Y. C. and Brown, P. and Choi, H. P. and Faller, L. L. and Guleria, J. and Hu, Z. and Klitgord, N. and Levy-Moonshine, A. and Maksad, A. and Mazumdar, V. and McGettrick, M. and Osmani, L. and Pokrzywa, R. and Rachlin, J. and Swaminathan, R. and Allen, B. and Housman, G. and Monahan, C. and Rochussen, K. and Tao, K. and Bhagwat, A. S. and Brenner, S. E. and Columbus, L. and de Crécy-Lagard, V. and Ferguson, D. and Fomenkov, A. and Gadda, G. and Morgan, R. D. and Osterman, A. L. and Rodionov, D. A. and Rodionova, I. A. and Rudd, K. E. and Söll, D. and Spain, J. and Xu, S. y and Bateman, A. and Blumenthal, R. M. and Bollinger, J. M. and Chang, W. S. and Ferrer, M. and Friedberg, I. and Galperin, M. Y. and Gobeill, J. and Haft, D. and Hunt, J. and Karp, P. and Klimke, W. and Krebs, C. and Macelis, D. and Madupu, R. and Martin, M. J. and Miller, J. H. and O'Donovan, C. and Palsson, B. and Ruch, P. and Setterdahl, A. and Sutton, G. and Tate, J. and Yakunin, A. and Tchigvintsev, D. and Plata, G. and Hu, J. and Greiner, R. and Horn, D. and Sjölander, K. and Salzberg, S. L. and Vitkup, D. and Letovsky, S. and Segrè, D. and DeLisi, C. and Roberts, R. J. and Steffen, M. and Kasif, S.},
    title = {The COMBREX Project: Design, Methodology, and Initial Results},
    journal = {PLoS Biology},
    volume = {11},
    number = {8},
    ISSN = {15449173 (ISSN)},
    DOI = {10.1371/journal.pbio.1001638
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84883152491&doi=10.1371%2fjournal.pbio.1001638&partnerID=40&md5=d2ed734e43d408813498f381ed173dbf},
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    [Bibtex]
    @article{RN599_2013,
    author = {Azimi, Y. and Chen, X. and Allen, D. G. and Pileggi, V. and Seto, P. and Droppo, I. G. and Farnood, R. R.},
    title = {UV disinfection of wastewater flocs: The effect of secondary treatment conditions},
    journal = {Water Science and Technology},
    volume = {67},
    number = {12},
    pages = {2719-2723},
    ISSN = {02731223 (ISSN)},
    DOI = {10.2166/wst.2013.148},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84880004058&doi=10.2166%2fwst.2013.148&partnerID=40&md5=16895f286a734d30664b1f993b1e0171},
    year = {2013},
    type = {Journal Article}
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    [Bibtex]
    @article{RN802_2013,
    author = {Beloglazova, N. and Flick, R. and Tchigvintsev, A. and Brown, G. and Popovic, A. and Nocek, B. and Yakunin, A. F.},
    title = {Nuclease activity of the human SAMHD1 protein implicated in the aicardi-goutières syndrome and HIV-1 restriction},
    journal = {Journal of Biological Chemistry},
    volume = {288},
    number = {12},
    pages = {8101-8110},
    ISSN = {00219258 (ISSN)},
    DOI = {10.1074/jbc.M112.431148},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84874959500&doi=10.1074%2fjbc.M112.431148&partnerID=40&md5=ba30dd363abf7d9b1a3b8e99b533873e},
    year = {2013},
    type = {Journal Article}
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    [Bibtex]
    @article{RN926_2013,
    author = {Domagalski, M. J. and Tkaczuk, K. L. and Chruszcz, M. and Skarina, T. and Onopriyenko, O. and Cymborowski, M. and Grabowski, M. and Savchenko, A. and Minor, W.},
    title = {Structure of isochorismate synthase DhbC from Bacillus anthracis},
    journal = {Acta Crystallographica Section F: Structural Biology and Crystallization Communications},
    volume = {69},
    number = {9},
    pages = {956-961},
    ISSN = {17443091 (ISSN)},
    DOI = {10.1107/S1744309113021246},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84883423921&doi=10.1107%2fS1744309113021246&partnerID=40&md5=aee3e67832182e071ecde40ad34f20fe},
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    [Bibtex]
    @article{RN627_2013,
    author = {Dumitrache, A. and Wolfaardt, G. and Allen, G. and Liss, S. N. and Lynd, L. R.},
    title = {Form and function of Clostridium thermocellum biofilms},
    journal = {Applied and Environmental Microbiology},
    volume = {79},
    number = {1},
    pages = {231-239},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.02563-12},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84871906709&doi=10.1128%2fAEM.02563-12&partnerID=40&md5=2028fbe03b04703ab2ba4b3fc1d08ad9},
    year = {2013},
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    [Bibtex]
    @article{RN528_2013,
    author = {Dumitrache, A. and Wolfaardt, G. M. and Allen, D. G. and Liss, S. N. and Lynd, L. R.},
    title = {Tracking the cellulolytic activity of Clostridium thermocellum biofilms},
    journal = {Biotechnology for Biofuels},
    volume = {6},
    number = {1},
    ISSN = {17546834 (ISSN)},
    DOI = {10.1186/1754-6834-6-175},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84888253787&doi=10.1186%2f1754-6834-6-175&partnerID=40&md5=03d16352787fc5b48453f90d609afcf3},
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    [Bibtex]
    @article{RN214_2013,
    author = {Engel, K. and Ashby, D. and Brady, S. F. and Cowan, D. A. and Doemer, J. and Edwards, E. A. and Fiebig, K. and Martens, E. C. and McCormac, D. and Mead, D. A. and Miyazaki, K. and Moreno-Hagelsieb, G. and O'Gara, F. and Reid, A. and Rose, D. R. and Simonet, P. and Sjöling, S. and Smalla, K. and Streit, W. R. and Tedman-Jones, J. and Valla, S. and Wellington, E. M. H. and Wu, C. C. and Liles, M. R. and Neufeld, J. D. and Sessitsch, A. and Charles, T. C.},
    title = {Meeting Report: 1st International Functional Metagenomics Workshop, May 7-8, 2012, St. Jacobs, Ontario, Canada},
    journal = {Standards in Genomic Sciences},
    volume = {8},
    number = {1},
    pages = {106-111},
    ISSN = {19443277 (ISSN)},
    DOI = {10.4056/sigs.3406845},
    year = {2013},
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    @article{RN411_2013,
    author = {Gawand, P. and Hyland, P. and Ekins, A. and Martin, V. J. J. and Mahadevan, R.},
    title = {Novel approach to engineer strains for simultaneous sugar utilization},
    journal = {Metabolic Engineering},
    volume = {20},
    pages = {63-72},
    ISSN = {10967176 (ISSN)},
    DOI = {10.1016/j.ymben.2013.08.003},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84884962157&doi=10.1016%2fj.ymben.2013.08.003&partnerID=40&md5=8d150b08f24e6515048720de2934b2e7},
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    [Bibtex]
    @article{RN345_2013,
    author = {Goacher, R. E. and Tsai, A. Y. L. and Master, E. R.},
    title = {Towards practical time-of-flight secondary ion mass spectrometry lignocellulolytic enzyme assays},
    journal = {Biotechnology for Biofuels},
    volume = {6},
    number = {1},
    ISSN = {17546834 (ISSN)},
    DOI = {10.1186/1754-6834-6-132},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84884327883&doi=10.1186%2f1754-6834-6-132&partnerID=40&md5=6447a51793d6643a6e91ce073bb38aa4},
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    [Bibtex]
    @article{RN407_2013,
    author = {Gosling, P. D. and Bridgens, B. N. and Albrecht, A. and Alpermann, H. and Angeleri, A. and Barnes, M. and Bartle, N. and Canobbio, R. and Dieringer, F. and Gellin, S. and Lewis, W. J. and Mageau, N. and Mahadevan, R. and Marion, J. M. and Marsden, P. and Milligan, E. and Phang, Y. P. and Sahlin, K. and Stimpfle, B. and Suire, O. and Uhlemann, J.},
    title = {Analysis and design of membrane structures: Results of a round robin exercise},
    journal = {Engineering Structures},
    volume = {48},
    pages = {313-328},
    ISSN = {01410296 (ISSN)},
    DOI = {10.1016/j.engstruct.2012.10.008},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84869879516&doi=10.1016%2fj.engstruct.2012.10.008&partnerID=40&md5=6c7765b637111c60396702c204d56d72},
    year = {2013},
    type = {Journal Article}
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    [Bibtex]
    @article{RN643_2013,
    author = {Hong, Y. and Nizami, A. S. and Pour Bafrani, M. and Saville, B. A. and Maclean, H. L.},
    title = {Impact of cellulase production on environmental and financial metrics for lignocellulosic ethanol},
    journal = {Biofuels, Bioproducts and Biorefining},
    volume = {7},
    number = {3},
    pages = {303-313},
    ISSN = {1932104X (ISSN)},
    DOI = {10.1002/bbb.1393},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84877657298&doi=10.1002%2fbbb.1393&partnerID=40&md5=a7fe604aa64d858daa55556acc00fd27},
    year = {2013},
    type = {Journal Article}
    }
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    journal = {Frontiers in Microbiology},
    volume = {4},
    number = {1},
    ISSN = {1664302X (ISSN)},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84890256236&doi=10.3389%2ffmicb.2013.00341&partnerID=40&md5=a394e27d0958ea0e0d1e1d896a9bf476},
    year = {2013},
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    [Bibtex]
    @article{RN217_2013,
    author = {Hug, L. A. and Maphosa, F. and Leys, D. and Löffler, F. E. and Smidt, H. and Edwards, E. A. and Adrian, L.},
    title = {Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases},
    journal = {Philosophical transactions of the Royal Society of London. Series B, Biological sciences},
    volume = {368},
    number = {1616},
    pages = {20120322},
    ISSN = {14712970 (ISSN)},
    DOI = {10.1098/rstb.2012.0322},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84881297512&doi=10.1098%2frstb.2012.0322&partnerID=40&md5=d1e81b3d9d26170c49c3b86108ff7521},
    year = {2013},
    type = {Journal Article}
    }
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    [Bibtex]
    @article{RN404_2013,
    author = {Hyland, P. B. and Mun, S. L. S. and Mahadevan, R.},
    title = {Prediction of weak acid toxicity in Saccharomyces cerevisiae using genome-scale metabolic models},
    journal = {Industrial Biotechnology},
    volume = {9},
    number = {4},
    pages = {229-235},
    ISSN = {15509087 (ISSN)},
    DOI = {10.1089/ind.2013.0004},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84881494538&doi=10.1089%2find.2013.0004&partnerID=40&md5=dbccdb1b7ac701063369147765265ba9},
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    [Bibtex]
    @article{RN495_2013,
    author = {Javaherian, S. and Anesiadis, N. and Mahadevan, R. and McGuigan, A. P.},
    title = {Design principles for generating robust gene expression patterns in dynamic engineered tissues},
    journal = {Integrative biology : quantitative biosciences from nano to macro},
    volume = {5},
    number = {3},
    pages = {578-589},
    ISSN = {17579694 (ISSN)},
    DOI = {10.1039/c3ib20274g},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84874790549&doi=10.1039%2fc3ib20274g&partnerID=40&md5=ff965477fdbcde6a36ea06da93c0ed5e},
    year = {2013},
    type = {Journal Article}
    }
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    [Bibtex]
    @article{RN494_2013,
    author = {Javaherian, S. and Li, K. J. and McGuigan, A. P.},
    title = {A simple and rapid method for generating patterned co-cultures with stable interfaces},
    journal = {BioTechniques},
    volume = {55},
    number = {1},
    pages = {21-26},
    ISSN = {07366205 (ISSN)},
    DOI = {10.2144/000114051},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84880047902&doi=10.2144%2f000114051&partnerID=40&md5=1354b3db8621d68a6b2030f4df6cdaef},
    year = {2013},
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    [Bibtex]
    @article{RN928_2013,
    author = {Kube, M. and Chernikova, T. N. and Al-Ramahi, Y. and Beloqui, A. and Lopez-Cortez, N. and Guazzaroni, M. E. and Heipieper, H. J. and Klages, S. and Kotsyurbenko, O. R. and Langer, I. and Nechitaylo, T. Y. and Lünsdorf, H. and Fernández, M. and Juárez, S. and Ciordia, S. and Singer, A. and Kagan, O. and Egorova, O. and Alain Petit, P. and Stogios, P. and Kim, Y. and Tchigvintsev, A. and Flick, R. and Denaro, R. and Genovese, M. and Albar, J. P. and Reva, O. N. and Martínez-Gomariz, M. and Tran, H. and Ferrer, M. and Savchenko, A. and Yakunin, A. F. and Yakimov, M. M. and Golyshina, O. V. and Reinhardt, R. and Golyshin, P. N.},
    title = {Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica},
    journal = {Nature Communications},
    volume = {4},
    pages = {2156},
    ISSN = {20411723 (ISSN)},
    DOI = {10.1038/ncomms3156},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84880845008&doi=10.1038%2fncomms3156&partnerID=40&md5=d9f02f78530c24f965cf45c0619b37eb},
    year = {2013},
    type = {Journal Article}
    }
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    [Bibtex]
    @article{RN796_2013,
    author = {Lemak, S. and Beloglazova, N. and Nocek, B. and Skarina, T. and Flick, R. and Brown, G. and Popovic, A. and Joachimiak, A. and Savchenko, A. and Yakunin, A. F.},
    title = {Toroidal structure and DNA cleavage by the CRISPR-associated [4Fe-4S] cluster containing Cas4 nuclease SSO0001 from Sulfolobus solfataricus},
    journal = {Journal of the American Chemical Society},
    volume = {135},
    number = {46},
    pages = {17476-17487},
    ISSN = {00027863 (ISSN)},
    DOI = {10.1021/ja408729b},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84888318075&doi=10.1021%2fja408729b&partnerID=40&md5=0996e85e1f4a329603c3407f4bb9da77},
    year = {2013},
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    [Bibtex]
    @article{RN219_2013,
    author = {Liang, X. and Devine, C. E. and Nelson, J. and Sherwood Lollar, B. and Zinder, S. and Edwards, E. A.},
    title = {Anaerobic conversion of chlorobenzene and benzene to CH4 and CO2 in bioaugmented microcosms},
    journal = {Environmental Science and Technology},
    volume = {47},
    number = {5},
    pages = {2378-2385},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/es3043092},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84874609060&doi=10.1021%2fes3043092&partnerID=40&md5=6fe281b867c33cd04cad66fb55e99283},
    year = {2013},
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    [Bibtex]
    @article{RN346_2013,
    author = {Lienemann, M. and Gandier, J. A. and Joensuu, J. J. and Iwanaga, A. and Takatsuji, Y. and Haruyama, T. and Master, E. and Tenkanen, M. and Lindera, M. B.},
    title = {Structure-function relationships in hydrophobins: Probing the role of charged side chains},
    journal = {Applied and Environmental Microbiology},
    volume = {79},
    number = {18},
    pages = {5533-5538},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.01493-13
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84884220390&doi=10.1128%2fAEM.01493-13&partnerID=40&md5=232e677ef4b3137b6c1d27055a006b91},
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  • [DOI] F. E. Löffler, J. Yan, K. M. Ritalahti, L. Adrian, E. A. Edwards, K. T. Konstantinidis, J. A. Müller, H. Fullerton, S. H. Zinder, and A. M. Spormann, “Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, dehalococcoidia classis nov., order dehalococcoidales ord. nov. and family dehalococcoidaceae fam. nov., within the phylum chloroflexi,” International journal of systematic and evolutionary microbiology, vol. 63, pp. 625-635, 2013.
    [Bibtex]
    @article{RN220_2013,
    author = {Löffler, F. E. and Yan, J. and Ritalahti, K. M. and Adrian, L. and Edwards, E. A. and Konstantinidis, K. T. and Müller, J. A. and Fullerton, H. and Zinder, S. H. and Spormann, A. M.},
    title = {Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi},
    journal = {International Journal of Systematic and Evolutionary Microbiology},
    volume = {63},
    pages = {625-635},
    ISSN = {14665026 (ISSN)},
    DOI = {10.1099/ijs.0.034926-0},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84874041126&doi=10.1099%2fijs.0.034926-0&partnerID=40&md5=984681177484fa8ca1af04bbb2d16b03},
    year = {2013},
    type = {Journal Article}
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    [Bibtex]
    @article{RN642_2013,
    author = {Luk, J. M. and Pourbafrani, M. and Saville, B. A. and Maclean, H. L.},
    title = {Ethanol or bioelectricity? Life cycle assessment of lignocellulosic bioenergy use in light-duty vehicles},
    journal = {Environmental Science and Technology},
    volume = {47},
    number = {18},
    pages = {10676-10684},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/es4006459},
    year = {2013},
    type = {Journal Article}
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    [Bibtex]
    @article{RN800_2013,
    author = {Martínez-Martínez, M. and Alcaide, M. and Tchigvintsev, A. and Reva, O. and Polaina, J. and Bargiela, R. and Guazzaroni, M. E. and Chicote, Á and Canet, A. and Valero, F. and Eguizabal, E. R. and Guerrero, M. C. and Yakunin, A. F. and Ferrer, M.},
    title = {Biochemical diversity of carboxyl esterases and lipases from Lake Arreo (Spain): A metagenomic approach},
    journal = {Applied and Environmental Microbiology},
    volume = {79},
    number = {12},
    pages = {3553-3562},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.00240-13},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84878605968&doi=10.1128%2fAEM.00240-13&partnerID=40&md5=282071e297ea7a2a9aa55139a28a53fd},
    year = {2013},
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    [Bibtex]
    @article{RN529_2013,
    author = {Mowla, D. and Tran, H. N. and Allen, D. G.},
    title = {A review of the properties of biosludge and its relevance to enhanced dewatering processes},
    journal = {Biomass and Bioenergy},
    volume = {58},
    pages = {365-378},
    ISSN = {09619534 (ISSN)},
    DOI = {10.1016/j.biombioe.2013.09.002},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84888848775&doi=10.1016%2fj.biombioe.2013.09.002&partnerID=40&md5=624b8ca8f6cb9b3df0ffd20a0a2cee7b},
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    [Bibtex]
    @incollection{RN644,
    author = {Nizami, A. S. and Saville, B. A. and Maclean, H. L.},
    title = {Anaerobic digesters: Perspectives and challenges},
    booktitle = {Bioenergy Production by Anaerobic Digestion: Using Agricultural Biomass and Organic Wastes},
    publisher = {Taylor and Francis},
    pages = {139-151},
    ISBN = {9780203137697 (ISBN)},
    DOI = {10.4324/9780203137697},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84918878881&doi=10.4324%2f9780203137697&partnerID=40&md5=8ab5c7ca13398581fdab54abdaeddeeb},
    year = {2013},
    type = {Book Section}
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    [Bibtex]
    @article{RN645_2013,
    author = {Pourbafrani, M. and McKechnie, J. and Maclean, H. L. and Saville, B. A.},
    title = {Life cycle greenhouse gas impacts of ethanol, biomethane and limonene production from citrus waste},
    journal = {Environmental Research Letters},
    volume = {8},
    number = {1},
    ISSN = {17489326 (ISSN)},
    DOI = {10.1088/1748-9326/8/1/015007},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84876191146&doi=10.1088%2f1748-9326%2f8%2f1%2f015007&partnerID=40&md5=6b994a60131721507f69d407f444c52e},
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    [Bibtex]
    @article{RN400_2013,
    author = {Salimi, F. and Mahadevan, R.},
    title = {Characterizing metabolic interactions in a clostridial co-culture for consolidated bioprocessing},
    journal = {BMC Biotechnology},
    volume = {13},
    ISSN = {14726750 (ISSN)},
    DOI = {10.1186/1472-6750-13-95},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84886741528&doi=10.1186%2f1472-6750-13-95&partnerID=40&md5=4cdc6251fed0a379aab16b2292de2e0d},
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    @article{RN531_2013,
    author = {Schnurr, P. J. and Espie, G. S. and Allen, D. G.},
    title = {Algae biofilm growth and the potential to stimulate lipid accumulation through nutrient starvation},
    journal = {Bioresource Technology},
    volume = {136},
    pages = {337-344},
    ISSN = {09608524 (ISSN)},
    DOI = {10.1016/j.biortech.2013.03.036},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84876327993&doi=10.1016%2fj.biortech.2013.03.036&partnerID=40&md5=793b4dd4e8e0f109add3a06bc38683b8},
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    [Bibtex]
    @article{RN797_2013,
    author = {Sherif, M. and Waung, D. and Korbeci, B. and Mavisakalyan, V. and Flick, R. and Brown, G. and Abou-Zaid, M. and Yakunin, A. F. and Master, E. R.},
    title = {Biochemical studies of the multicopper oxidase (small laccase) from Streptomyces coelicolor using bioactive phytochemicals and site-directed mutagenesis},
    journal = {Microbial Biotechnology},
    volume = {6},
    number = {5},
    pages = {588-597},
    ISSN = {17517907 (ISSN)},
    DOI = {10.1111/1751-7915.12068},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84882279061&doi=10.1111%2f1751-7915.12068&partnerID=40&md5=e9274d9c2f0a9f7061b6c73ab29e93fa},
    year = {2013},
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    }
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    [Bibtex]
    @article{RN931_2013,
    author = {Singer, A. U. and Schulze, S. and Skarina, T. and Xu, X. and Cui, H. and Eschen-Lippold, L. and Egler, M. and Srikumar, T. and Raught, B. and Lee, J. and Scheel, D. and Savchenko, A. and Bonas, U.},
    title = {A pathogen type III effector with a novel E3 ubiquitin ligase architecture},
    journal = {PLoS Pathogens},
    volume = {9},
    number = {1},
    ISSN = {15537366 (ISSN)},
    DOI = {10.1371/journal.ppat.1003121},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84875074459&doi=10.1371%2fjournal.ppat.1003121&partnerID=40&md5=82d819707ff313f69cbeca027a8e2adb},
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    @article{RN496_2013,
    author = {Slater, B. and Londono, C. and McGuigan, A. P.},
    title = {An algorithm to quantify correlated collective cell migration behavior},
    journal = {BioTechniques},
    volume = {54},
    number = {2},
    pages = {87-92},
    ISSN = {07366205 (ISSN)},
    DOI = {10.2144/000113990},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84876485509&doi=10.2144%2f000113990&partnerID=40&md5=d684c9a02708b1fbca5ad5595d92e455},
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    [Bibtex]
    @article{RN925_2013,
    author = {Stogios, P. J. and Spanogiannopoulos, P. and Evdokimova, E. and Egorova, O. and Shakya, T. and Todorovic, N. and Capretta, A. and Wright, G. D. and Savchenko, A.},
    title = {Structure-guided optimization of protein kinase inhibitors reverses aminoglycoside antibiotic resistance},
    journal = {Biochemical Journal},
    volume = {454},
    number = {2},
    pages = {191-200},
    ISSN = {02646021 (ISSN)},
    DOI = {10.1042/BJ20130317},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84881537568&doi=10.1042%2fBJ20130317&partnerID=40&md5=6074984141948a4fd84d6593cf4d6ee8},
    year = {2013},
    type = {Journal Article}
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    [Bibtex]
    @article{RN687_2013,
    author = {Tabtabaei, S. and Ataya Pulido, V. M. and Diosady, L. L.},
    title = {Destabilization of yellow mustard emulsion using organic solvents},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    volume = {90},
    number = {5},
    pages = {707-716},
    ISSN = {0003021X (ISSN)},
    DOI = {10.1007/s11746-013-2202-7},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84880700657&doi=10.1007%2fs11746-013-2202-7&partnerID=40&md5=228eaf34b115818b0f616b97ac1a1b18},
    year = {2013},
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    @article{RN686_2013,
    author = {Tabtabaei, S. and Diosady, L. L.},
    title = {Aqueous and enzymatic extraction processes for the production of food-grade proteins and industrial oil from dehulled yellow mustard flour},
    journal = {Food Research International},
    volume = {52},
    number = {2},
    pages = {547-556},
    ISSN = {09639969 (ISSN)},
    DOI = {10.1016/j.foodres.2013.03.005
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    @article{RN221_2013,
    author = {Tang, S. and Chan, W. W. M. and Fletcher, K. E. and Seifert, J. and Liang, X. and Löffler, F. E. and Edwards, E. A. and Adrian, L.},
    title = {Functional characterization of reductive dehalogenases by using blue native polyacrylamide gel electrophoresis},
    journal = {Applied and Environmental Microbiology},
    volume = {79},
    number = {3},
    pages = {974-981},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.01873-12
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    [Bibtex]
    @article{RN223_2013,
    author = {Tang, S. and Edwards, E. A.},
    title = {Complete genome sequence of Bacteroidales strain CF from a chloroform-dechlorinating enrichment culture},
    journal = {Genome Announcements},
    volume = {1},
    number = {6},
    ISSN = {21698287 (ISSN)},
    DOI = {10.1128/genomeA.01066-13},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84999750787&doi=10.1128%2fgenomeA.01066-13&partnerID=40&md5=07c5cdcc53c043824e3a599789013fc9},
    year = {2013},
    type = {Journal Article}
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  • [DOI] S. Tang and E. A. Edwards, “Identification of dehalobacter reductive dehalogenases that catalyse dechlorination of chloroform, 1,1,1-trichloroethane and 1,1-dichloroethane,” Philosophical transactions of the royal society of london. series b, biological sciences, vol. 368, iss. 1616, p. 20120318, 2013.
    [Bibtex]
    @article{RN215_2013,
    author = {Tang, S. and Edwards, E. A.},
    title = {Identification of Dehalobacter reductive dehalogenases that catalyse dechlorination of chloroform, 1,1,1-trichloroethane and 1,1-dichloroethane},
    journal = {Philosophical transactions of the Royal Society of London. Series B, Biological sciences},
    volume = {368},
    number = {1616},
    pages = {20120318},
    ISSN = {14712970 (ISSN)},
    DOI = {10.1098/rstb.2012.0318},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84884185468&doi=10.1098%2frstb.2012.0318&partnerID=40&md5=0ccc33f473be5628eae7fa1c62b7bc59},
    year = {2013},
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  • [DOI] G. D. Tartakovsky, A. M. Tartakovsky, T. D. Scheibe, Y. Fang, R. Mahadevan, and D. R. Lovley, “Pore-scale simulation of microbial growth using a genome-scale metabolic model: implications for darcy-scale reactive transport,” Advances in water resources, vol. 59, pp. 256-270, 2013.
    [Bibtex]
    @article{RN402_2013,
    author = {Tartakovsky, G. D. and Tartakovsky, A. M. and Scheibe, T. D. and Fang, Y. and Mahadevan, R. and Lovley, D. R.},
    title = {Pore-scale simulation of microbial growth using a genome-scale metabolic model: Implications for Darcy-scale reactive transport},
    journal = {Advances in Water Resources},
    volume = {59},
    pages = {256-270},
    ISSN = {03091708 (ISSN)},
    DOI = {10.1016/j.advwatres.2013.05.007},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84881525046&doi=10.1016%2fj.advwatres.2013.05.007&partnerID=40&md5=5a6f5bbfe1dfbaf12be58b4d0c154c2a},
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    [Bibtex]
    @article{RN795_2013,
    author = {Tchigvintsev, A. and Tchigvintsev, D. and Flick, R. and Popovic, A. and Dong, A. and Xu, X. and Brown, G. and Lu, W. and Wu, H. and Cui, H. and Dombrowski, L. and Joo, J. C. and Beloglazova, N. and Min, J. and Savchenko, A. and Caudy, A. A. and Rabinowitz, J. D. and Murzin, A. G. and Yakunin, A. F.},
    title = {Biochemical and structural studies of conserved Maf proteins revealed nucleotide pyrophosphatases with a preference for modified nucleotides},
    journal = {Chemistry and Biology},
    volume = {20},
    number = {11},
    pages = {1386-1398},
    ISSN = {10745521 (ISSN)},
    DOI = {10.1016/j.chembiol.2013.09.011},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84888296777&doi=10.1016%2fj.chembiol.2013.09.011&partnerID=40&md5=7240e157ed501e8f52825c2d0c0a4355},
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    @article{RN930_2013,
    author = {Tkaczuk, K. L. and Shumilin, A. I. and Chruszcz, M. and Evdokimova, E. and Savchenko, A. and Minor, W.},
    title = {Structural and functional insight into the universal stress protein family},
    journal = {Evolutionary Applications},
    volume = {6},
    number = {3},
    pages = {434-449},
    ISSN = {17524563 (ISSN)},
    DOI = {10.1111/eva.12057},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84875676199&doi=10.1111%2feva.12057&partnerID=40&md5=86fe259905cbfb09558ef023092468cf},
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    @article{RN344_2013,
    author = {Vuong, T. V. and Vesterinen, A. H. and Foumani, M. and Juvonen, M. and Seppälä, J. and Tenkanen, M. and Master, E. R.},
    title = {Xylo- and cello-oligosaccharide oxidation by gluco-oligosaccharide oxidase from Sarocladium strictum and variants with reduced substrate inhibition},
    journal = {Biotechnology for Biofuels},
    volume = {6},
    number = {1},
    ISSN = {17546834 (ISSN)},
    DOI = {10.1186/1754-6834-6-148},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84885363941&doi=10.1186%2f1754-6834-6-148&partnerID=40&md5=0f9f8fc0597f4c93052fbc5fde007173},
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  • [DOI] Y. F. Xu, F. Létisse, F. Absalan, W. Lu, E. Kuznetsova, G. Brown, A. A. Caudy, A. F. Yakunin, J. R. Broach, and J. D. Rabinowitz, “Nucleotide degradation and ribose salvage in yeast,” Molecular systems biology, vol. 9, iss. 1, 2013.
    [Bibtex]
    @article{RN803_2013,
    author = {Xu, Y. F. and Létisse, F. and Absalan, F. and Lu, W. and Kuznetsova, E. and Brown, G. and Caudy, A. A. and Yakunin, A. F. and Broach, J. R. and Rabinowitz, J. D.},
    title = {Nucleotide degradation and ribose salvage in yeast},
    journal = {Molecular Systems Biology},
    volume = {9},
    number = {1},
    ISSN = {17444292 (ISSN)},
    DOI = {10.1038/msb.2013.21},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84884188178&doi=10.1038%2fmsb.2013.21&partnerID=40&md5=b9a39d48fcd113065d399ac6f73c34ee},
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    [Bibtex]
    @article{RN401_2013,
    author = {Zhao, J. and Scheibe, T. D. and Mahadevan, R.},
    title = {Model-based analysis of mixed uranium(VI) reduction by biotic and abiotic pathways during in situ bioremediation},
    journal = {Chemical Geology},
    volume = {357},
    pages = {215-222},
    ISSN = {00092541 (ISSN)},
    DOI = {10.1016/j.chemgeo.2013.08.037},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84884722805&doi=10.1016%2fj.chemgeo.2013.08.037&partnerID=40&md5=caebac7d497f2468f2872c84e28fa19d},
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    [Bibtex]
    @article{RN405_2013,
    author = {Zheng, H. and Beliavsky, A. and Tchigvintsev, A. and Brunzelle, J. S. and Brown, G. and Flick, R. and Evdokimova, E. and Wawrzak, Z. and Mahadevan, R. and Anderson, W. F. and Savchenko, A. and Yakunin, A. F.},
    title = {Structure and activity of the NAD(P)+-dependent succinate semialdehyde dehydrogenase YneI from Salmonella typhimurium},
    journal = {Proteins: Structure, Function and Bioinformatics},
    volume = {81},
    number = {6},
    pages = {1031-1041},
    ISSN = {08873585 (ISSN)},
    DOI = {10.1002/prot.24227},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84878154249&doi=10.1002%2fprot.24227&partnerID=40&md5=0e8b3ae3e95ee46d1b2932b184087ad2},
    year = {2013},
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    [Bibtex]
    @article{RN408_2013,
    author = {Zhuang, K. and Yang, L. and Cluett, W. R. and Mahadevan, R.},
    title = {Dynamic strain scanning optimization: An efficient strain design strategy for balanced yield, titer, and productivity. DySScO strategy for strain design},
    journal = {BMC Biotechnology},
    volume = {13},
    ISSN = {14726750 (ISSN)},
    DOI = {10.1186/1472-6750-13-8},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84873258066&doi=10.1186%2f1472-6750-13-8&partnerID=40&md5=7c404984f146e1ca3f64229e51772878},
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2012

  • [DOI] Y. Azimi, D. G. Allen, and R. R. Farnood, “Kinetics of uv inactivation of wastewater bioflocs,” Water research, vol. 46, iss. 12, pp. 3827-3836, 2012.
    [Bibtex]
    @article{RN532_2012,
    author = {Azimi, Y. and Allen, D. G. and Farnood, R. R.},
    title = {Kinetics of UV inactivation of wastewater bioflocs},
    journal = {Water Research},
    volume = {46},
    number = {12},
    pages = {3827-3836},
    ISSN = {00431354 (ISSN)},
    DOI = {10.1016/j.watres.2012.04.019},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84861725091&doi=10.1016%2fj.watres.2012.04.019&partnerID=40&md5=afb3f8b643127e0549c43cb832a5a55a},
    year = {2012},
    type = {Journal Article}
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  • [DOI] M. Barlett, K. Zhuang, R. Mahadevan, and D. Lovley, “Integrative analysis of geobacter spp. and sulfate-reducing bacteria during uranium bioremediation,” Biogeosciences, vol. 9, iss. 3, pp. 1033-1040, 2012.
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    @article{RN413_2012,
    author = {Barlett, M. and Zhuang, K. and Mahadevan, R. and Lovley, D.},
    title = {Integrative analysis of Geobacter spp. and sulfate-reducing bacteria during uranium bioremediation},
    journal = {Biogeosciences},
    volume = {9},
    number = {3},
    pages = {1033-1040},
    ISSN = {17264170 (ISSN)},
    DOI = {10.5194/bg-9-1033-2012
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84865355487&doi=10.5194%2fbg-9-1033-2012&partnerID=40&md5=8722c51cb3d7ebc5c6068dcffdf5abef},
    year = {2012},
    type = {Journal Article}
    }
  • [DOI] C. C. H. Chan, S. O. C. Mundle, T. Eckert, X. Liang, S. Tang, G. Lacrampe-Couloume, E. A. Edwards, and B. Sherwood Lollar, “Large carbon isotope fractionation during biodegradation of chloroform by dehalobacter cultures,” Environmental science and technology, vol. 46, iss. 18, pp. 10154-10160, 2012.
    [Bibtex]
    @article{RN226_2012,
    author = {Chan, C. C. H. and Mundle, S. O. C. and Eckert, T. and Liang, X. and Tang, S. and Lacrampe-Couloume, G. and Edwards, E. A. and Sherwood Lollar, B.},
    title = {Large carbon isotope fractionation during biodegradation of chloroform by Dehalobacter cultures},
    journal = {Environmental Science and Technology},
    volume = {46},
    number = {18},
    pages = {10154-10160},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/es3010317},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84866425570&doi=10.1021%2fes3010317&partnerID=40&md5=57c2f747ca012a57b3f3889de9fc056e},
    year = {2012},
    type = {Journal Article}
    }
  • E. Edwards, “Bacteria for remediating groundwater,” Industrial bioprocessing, vol. 34, iss. 6, p. 6, 2012.
    [Bibtex]
    @article{RN225_2012,
    author = {Edwards, E.},
    title = {Bacteria for remediating groundwater},
    journal = {Industrial Bioprocessing},
    volume = {34},
    number = {6},
    pages = {6},
    ISSN = {10567194 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84891277699&partnerID=40&md5=2f102b5332c311d75225dcad83d4bc7f},
    year = {2012},
    type = {Journal Article}
    }
  • [DOI] P. J. Facchini, J. Bohlmann, P. S. Covello, V. De Luca, R. Mahadevan, J. E. Page, D. K. Ro, C. W. Sensen, R. Storms, and V. J. J. Martin, “Synthetic biosystems for the production of high-value plant metabolites,” Trends in biotechnology, vol. 30, iss. 3, pp. 127-131, 2012.
    [Bibtex]
    @article{RN417_2012,
    author = {Facchini, P. J. and Bohlmann, J. and Covello, P. S. and De Luca, V. and Mahadevan, R. and Page, J. E. and Ro, D. K. and Sensen, C. W. and Storms, R. and Martin, V. J. J.},
    title = {Synthetic biosystems for the production of high-value plant metabolites},
    journal = {Trends in Biotechnology},
    volume = {30},
    number = {3},
    pages = {127-131},
    ISSN = {01677799 (ISSN)},
    DOI = {10.1016/j.tibtech.2011.10.001},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84858070612&doi=10.1016%2fj.tibtech.2011.10.001&partnerID=40&md5=4020a9ad4bf938b0943c73c64c8b2b32},
    year = {2012},
    type = {Journal Article}
    }
  • [DOI] E. Fernandez-Fueyo, F. J. Ruiz-Dueñas, P. Ferreira, D. Floudas, D. S. Hibbett, P. Canessa, L. F. Larrondo, T. Y. James, D. Seelenfreund, S. Lobos, R. Polanco, M. Tello, Y. Honda, T. Watanabe, T. Watanabe, J. S. Ryu, C. P. Kubicek, M. Schmoll, J. Gaskell, K. E. Hammel, F. J. St John, A. Vanden Wymelenberg, G. Sabat, S. S. BonDurant, K. Syed, J. S. Yadav, H. Doddapaneni, V. Subramanian, J. L. Lavín, J. A. Oguiza, G. Perez, A. G. Pisabarro, L. Ramirez, F. Santoyo, E. Master, P. M. Coutinho, B. Henrissat, V. Lombard, J. K. Magnuson, U. Kües, C. Hori, K. Igarashi, M. Samejima, B. W. Held, K. W. Barry, K. M. LaButti, A. Lapidus, E. A. Lindquist, S. M. Lucas, R. Riley, A. A. Salamov, D. Hoffmeister, D. Schwenk, Y. Hadar, O. Yarden, R. P. De Vries, A. Wiebenga, J. Stenlid, D. Eastwood, I. V. Grigoriev, R. M. Berka, R. A. Blanchette, P. Kersten, A. T. Martinez, R. Vicuna, and D. Cullen, “Comparative genomics of ceriporiopsis subvermispora and phanerochaete chrysosporium provide insight into selective ligninolysis,” Proceedings of the national academy of sciences of the united states of america, vol. 109, iss. 21, p. 8352, 2012.
    [Bibtex]
    @article{RN351_2012,
    author = {Fernandez-Fueyo, E. and Ruiz-Dueñas, F. J. and Ferreira, P. and Floudas, D. and Hibbett, D. S. and Canessa, P. and Larrondo, L. F. and James, T. Y. and Seelenfreund, D. and Lobos, S. and Polanco, R. and Tello, M. and Honda, Y. and Watanabe, T. and Watanabe, T. and Ryu, J. S. and Kubicek, C. P. and Schmoll, M. and Gaskell, J. and Hammel, K. E. and St John, F. J. and Vanden Wymelenberg, A. and Sabat, G. and BonDurant, S. S. and Syed, K. and Yadav, J. S. and Doddapaneni, H. and Subramanian, V. and Lavín, J. L. and Oguiza, J. A. and Perez, G. and Pisabarro, A. G. and Ramirez, L. and Santoyo, F. and Master, E. and Coutinho, P. M. and Henrissat, B. and Lombard, V. and Magnuson, J. K. and Kües, U. and Hori, C. and Igarashi, K. and Samejima, M. and Held, B. W. and Barry, K. W. and LaButti, K. M. and Lapidus, A. and Lindquist, E. A. and Lucas, S. M. and Riley, R. and Salamov, A. A. and Hoffmeister, D. and Schwenk, D. and Hadar, Y. and Yarden, O. and De Vries, R. P. and Wiebenga, A. and Stenlid, J. and Eastwood, D. and Grigoriev, I. V. and Berka, R. M. and Blanchette, R. A. and Kersten, P. and Martinez, A. T. and Vicuna, R. and Cullen, D.},
    title = {Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    volume = {109},
    number = {21},
    pages = {8352},
    ISSN = {00278424 (ISSN)},
    DOI = {10.1073/pnas.1206295109},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84861419905&doi=10.1073%2fpnas.1206295109&partnerID=40&md5=5f77993e73b222157991e07efb8a8509},
    year = {2012},
    type = {Journal Article}
    }
  • [DOI] E. Fernandez-Fueyo, F. J. Ruiz-Dueñas, P. Ferreira, D. Floudas, D. S. Hibbett, P. Canessa, L. F. Larrondo, T. Y. James, D. Seelenfreund, S. Lobos, R. Polanco, M. Tello, Y. Honda, T. Watanabe, T. Watanabe, R. J. San, C. P. Kubicek, M. Schmoll, J. Gaskell, K. E. Hammel, F. J. St John, A. V. Wymelenberg, G. Sabat, S. S. BonDurant, K. Syed, J. S. Yadav, H. Doddapaneni, V. Subramanian, J. L. Laviń, J. A. Oguiza, G. Perez, A. G. Pisabarro, L. Ramirez, F. Santoyo, E. Master, P. M. Coutinho, B. Henrissat, V. Lombard, J. K. Magnuson, U. Kuës, C. Hori, K. Igarashi, M. Samejima, B. W. Held, K. W. Barry, K. M. LaButti, A. Lapidus, E. A. Lindquist, S. M. Lucas, R. Riley, A. A. Salamov, D. Hoffmeister, D. Schwenk, Y. Hadar, O. Yarden, R. P. De Vries, A. Wiebenga, J. Stenlid, D. Eastwood, I. V. Grigoriev, R. M. Berka, R. A. Blanchette, P. Kersten, A. T. Martinez, R. Vicuna, and D. Cullen, “Comparative genomics of ceriporiopsis subvermispora and phanerochaete chrysosporium provide insight into selective ligninolysis,” Proceedings of the national academy of sciences of the united states of america, vol. 109, iss. 14, pp. 5458-5463, 2012.
    [Bibtex]
    @article{RN353_2012,
    author = {Fernandez-Fueyo, E. and Ruiz-Dueñas, F. J. and Ferreira, P. and Floudas, D. and Hibbett, D. S. and Canessa, P. and Larrondo, L. F. and James, T. Y. and Seelenfreund, D. and Lobos, S. and Polanco, R. and Tello, M. and Honda, Y. and Watanabe, T. and Watanabe, T. and San, R. J. and Kubicek, C. P. and Schmoll, M. and Gaskell, J. and Hammel, K. E. and St John, F. J. and Wymelenberg, A. V. and Sabat, G. and BonDurant, S. S. and Syed, K. and Yadav, J. S. and Doddapaneni, H. and Subramanian, V. and Laviń, J. L. and Oguiza, J. A. and Perez, G. and Pisabarro, A. G. and Ramirez, L. and Santoyo, F. and Master, E. and Coutinho, P. M. and Henrissat, B. and Lombard, V. and Magnuson, J. K. and Kuës, U. and Hori, C. and Igarashi, K. and Samejima, M. and Held, B. W. and Barry, K. W. and LaButti, K. M. and Lapidus, A. and Lindquist, E. A. and Lucas, S. M. and Riley, R. and Salamov, A. A. and Hoffmeister, D. and Schwenk, D. and Hadar, Y. and Yarden, O. and De Vries, R. P. and Wiebenga, A. and Stenlid, J. and Eastwood, D. and Grigoriev, I. V. and Berka, R. M. and Blanchette, R. A. and Kersten, P. and Martinez, A. T. and Vicuna, R. and Cullen, D.},
    title = {Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis},
    journal = {Proceedings of the National Academy of Sciences of the United States of America},
    volume = {109},
    number = {14},
    pages = {5458-5463},
    ISSN = {00278424 (ISSN)},
    DOI = {10.1073/pnas.1119912109},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84859466995&doi=10.1073%2fpnas.1119912109&partnerID=40&md5=df2b2c468cff2e588de011977385ddcc},
    year = {2012},
    type = {Journal Article}
    }
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    [Bibtex]
    @article{RN533_2012,
    author = {García-Becerra, F. Y. and Acosta, E. J. and Allen, D. G.},
    title = {Wood adhesives based on alkaline extracts from wastewater biosolids and mustard protein},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    volume = {89},
    number = {7},
    pages = {1315-1323},
    ISSN = {0003021X (ISSN)},
    DOI = {10.1007/s11746-012-2024-z},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84863777763&doi=10.1007%2fs11746-012-2024-z&partnerID=40&md5=6d8c760fce4ba85dc99201ebcd192b90},
    year = {2012},
    type = {Journal Article}
    }
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    [Bibtex]
    @article{RN230_2012,
    author = {Goacher, R. E. and Edwards, E. A. and Yakunin, A. F. and Mims, C. A. and Master, E. R.},
    title = {Application of time-of-flight-secondary ion mass spectrometry for the detection of enzyme activity on solid wood substrates},
    journal = {Analytical Chemistry},
    volume = {84},
    number = {10},
    pages = {4443-4451},
    ISSN = {00032700 (ISSN)},
    DOI = {10.1021/ac3005346},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84861178860&doi=10.1021%2fac3005346&partnerID=40&md5=ff98894f8a44f641658b15ecf2d469a6},
    year = {2012},
    type = {Journal Article}
    }
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    [Bibtex]
    @article{RN805_2012,
    author = {Gonzalez, C. F. and Tchigvintsev, A. and Brown, G. and Flick, R. and Evdokimova, E. and Xu, X. and Osipiuk, J. and Cuff, M. E. and Lynch, S. and Joachimiak, A. and Savchenko, A. and Yakunin, A. F.},
    title = {Structure and activity of the Pseudomonas aeruginosa hotdog-fold thioesterases PA5202 and PA2801},
    journal = {Biochemical Journal},
    volume = {444},
    number = {3},
    pages = {445-455},
    ISSN = {02646021 (ISSN)},
    DOI = {10.1042/BJ20112032},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84862239276&doi=10.1042%2fBJ20112032&partnerID=40&md5=d8e555c37dd2c881eeba86b5bad0c7bd},
    year = {2012},
    type = {Journal Article}
    }
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    [Bibtex]
    @article{RN937_2012,
    author = {Goral, A. M. and Tkaczuk, K. L. and Chruszcz, M. and Kagan, O. and Savchenko, A. and Minor, W.},
    title = {Crystal structure of a putative isochorismatase hydrolase from Oleispira antarctica},
    journal = {Journal of Structural and Functional Genomics},
    volume = {13},
    number = {1},
    pages = {27-36},
    ISSN = {1345711X (ISSN)},
    DOI = {10.1007/s10969-012-9127-5},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84858709594&doi=10.1007%2fs10969-012-9127-5&partnerID=40&md5=a7415475e4dab5120380c4f30c77e026},
    year = {2012},
    type = {Journal Article}
    }
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    [Bibtex]
    @article{RN932_2012,
    author = {Halavaty, A. S. and Kim, Y. and Minasov, G. and Shuvalova, L. and Dubrovska, I. and Winsor, J. and Zhou, M. and Onopriyenko, O. and Skarina, T. and Papazisi, L. and Kwon, K. and Peterson, S. N. and Joachimiak, A. and Savchenko, A. and Anderson, W. F.},
    title = {Structural characterization and comparison of three acyl-carrier-protein synthases from pathogenic bacteria},
    journal = {Acta Crystallographica Section D: Biological Crystallography},
    volume = {68},
    number = {10},
    pages = {1359-1370},
    ISSN = {09074449 (ISSN)},
    DOI = {10.1107/S0907444912029101},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84866706479&doi=10.1107%2fS0907444912029101&partnerID=40&md5=1f51c45ea361b414f1508f7abf1c34ed},
    year = {2012},
    type = {Journal Article}
    }
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    [Bibtex]
    @article{RN936_2012,
    author = {Hou, J. and Wojciechowska, K. and Zheng, H. and Chruszcz, M. and Cooper, D. R. and Cymborowski, M. and Skarina, T. and Gordon, E. and Luo, H. and Savchenko, A. and Minor, W.},
    title = {Structure of a short-chain dehydrogenase/reductase from Bacillus anthracis},
    journal = {Acta Crystallographica Section F: Structural Biology and Crystallization Communications},
    volume = {68},
    number = {6},
    pages = {632-637},
    ISSN = {17443091 (ISSN)},
    DOI = {10.1107/S1744309112017939},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84862239275&doi=10.1107%2fS1744309112017939&partnerID=40&md5=1520480b604fc48e6363c6f7ac2dce4d},
    year = {2012},
    type = {Journal Article}
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    [Bibtex]
    @article{RN228_2012,
    author = {Hug, L. A. and Beiko, R. G. and Rowe, A. R. and Richardson, R. E. and Edwards, E. A.},
    title = {Comparative metagenomics of three Dehalococcoides-containing enrichment cultures: The role of the non-dechlorinating community},
    journal = {BMC Genomics},
    volume = {13},
    number = {1},
    ISSN = {14712164 (ISSN)},
    DOI = {10.1186/1471-2164-13-327},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84867609258&doi=10.1186%2f1471-2164-13-327&partnerID=40&md5=f2105844c80abd4fb1aadccd3843dd7f},
    year = {2012},
    type = {Journal Article}
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    [Bibtex]
    @article{RN629_2012,
    author = {Jones, J. M. and Ferguson, S. and Edwards, E. and Walton, T. and McCurdy, N. and Howell, D.},
    title = {Experiences of care delivery: Endometrial cancer survivors at end of treatment},
    journal = {Gynecologic Oncology},
    volume = {124},
    number = {3},
    pages = {458-464},
    ISSN = {00908258 (ISSN)},
    DOI = {10.1016/j.ygyno.2011.10.037},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84856734596&doi=10.1016%2fj.ygyno.2011.10.037&partnerID=40&md5=50e71379bfcdc6f248074b711586fca5},
    year = {2012},
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    [Bibtex]
    @article{RN689_2012,
    author = {Jung, Y. T. and Diosady, L. L.},
    title = {Application of a ternary phase diagram to the phase separation of oil-in-water emulsions using isopropyl alcohol},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    volume = {89},
    number = {12},
    pages = {2127-2134},
    ISSN = {0003021X (ISSN)},
    DOI = {10.1007/s11746-012-2127-6},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84870066635&doi=10.1007%2fs11746-012-2127-6&partnerID=40&md5=4ffc123d4487d68ecfc824eaa49ee59c},
    year = {2012},
    type = {Journal Article}
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    [Bibtex]
    @article{RN415_2012,
    author = {Khazaei, T. and McGuigan, A. and Mahadevan, R.},
    title = {Ensemble modeling of cancer metabolism},
    journal = {Frontiers in Physiology},
    volume = {3 MAY},
    ISSN = {1664042X (ISSN)},
    DOI = {10.3389/fphys.2012.00135
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84866354583&doi=10.3389%2ffphys.2012.00135&partnerID=40&md5=7a158f2ad44853faf9b6423bf5fd5165},
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  • [DOI] S. Lemak, A. Tchigvintsev, P. Petit, R. Flick, A. U. Singer, G. Brown, E. Evdokimova, O. Egorova, C. F. Gonzalez, T. N. Chernikova, M. M. Yakimov, M. Kube, R. Reinhardt, P. N. Golyshin, A. Savchenko, and A. F. Yakunin, “Structure and activity of the cold-active and anion-activated carboxyl esterase olei01171 from the oil-degrading marine bacterium oleispira antarctica,” Biochemical journal, vol. 445, iss. 2, pp. 193-203, 2012.
    [Bibtex]
    @article{RN804_2012,
    author = {Lemak, S. and Tchigvintsev, A. and Petit, P. and Flick, R. and Singer, A. U. and Brown, G. and Evdokimova, E. and Egorova, O. and Gonzalez, C. F. and Chernikova, T. N. and Yakimov, M. M. and Kube, M. and Reinhardt, R. and Golyshin, P. N. and Savchenko, A. and Yakunin, A. F.},
    title = {Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica},
    journal = {Biochemical Journal},
    volume = {445},
    number = {2},
    pages = {193-203},
    ISSN = {02646021 (ISSN)},
    DOI = {10.1042/BJ20112113},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84863214691&doi=10.1042%2fBJ20112113&partnerID=40&md5=e9054a6715dd9e11b73bcc2e9baf6f28},
    year = {2012},
    type = {Journal Article}
    }
  • Y. O. Li and L. L. Diosady, “Microencapsulation and its application in micronutrient fortification through “engineered” staple foods,” Agro food industry hi-tech, vol. 23, iss. 2, pp. 18-21, 2012.
    [Bibtex]
    @article{RN692_2012,
    author = {Li, Y. O. and Diosady, L. L.},
    title = {Microencapsulation and its application in micronutrient fortification through "engineered" staple foods},
    journal = {Agro Food Industry Hi-Tech},
    volume = {23},
    number = {2},
    pages = {18-21},
    ISSN = {17226996 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84865980971&partnerID=40&md5=a7f6d0ddcbf3d7917df9df8f7d97243e},
    year = {2012},
    type = {Journal Article}
    }
  • Y. O. Li, L. L. Diosady, L. Bohac, A. S. Wesley, and M. G. V. Mannar, “Double fortification of salt with iron and iodine as an effective tool in simultaneously alleviating two micronutrient deficiencies,” in Micronutrients: sources, properties and health effects, Nova Science Publishers, Inc., 2012, pp. 95-116.
    [Bibtex]
    @incollection{RN693,
    author = {Li, Y. O. and Diosady, L. L. and Bohac, L. and Wesley, A. S. and Mannar, M. G. V.},
    title = {Double fortification of salt with iron and iodine as an effective tool in simultaneously alleviating two micronutrient deficiencies},
    booktitle = {Micronutrients: Sources, Properties and Health Effects},
    publisher = {Nova Science Publishers, Inc.},
    pages = {95-116},
    ISBN = {9781621008347 (ISBN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84895412217&partnerID=40&md5=3f89379d56b20b86b84c43629c6b7cf4},
    year = {2012},
    type = {Book Section}
    }
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    number = {5},
    pages = {1596-1600},
    ISSN = {00992240 (ISSN)},
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84857078845&doi=10.1128%2fAEM.06511-11&partnerID=40&md5=9d520a8f37f9d1ea089dc8e0cac5a7d0},
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    @article{RN354_2012,
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    journal = {Applied Microbiology and Biotechnology},
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    journal = {Computational and Structural Biotechnology Journal},
    volume = {3},
    number = {4},
    ISSN = {20010370 (ISSN)},
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    [Bibtex]
    @article{RN350_2012,
    author = {Mahajan, S. and Jeremic, D. and Goacher, R. E. and Master, E. R.},
    title = {Mode of coniferous wood decay by the white rot fungus Phanerochaete carnosa as elucidated by FTIR and ToF-SIMS},
    journal = {Applied Microbiology and Biotechnology},
    volume = {94},
    number = {5},
    pages = {1303-1311},
    ISSN = {01757598 (ISSN)},
    DOI = {10.1007/s00253-011-3830-1},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84863851064&doi=10.1007%2fs00253-011-3830-1&partnerID=40&md5=eec2999b306fea74081a304e595f0091},
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    @article{RN227_2012,
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    journal = {Applied and Environmental Microbiology},
    volume = {78},
    number = {15},
    pages = {5280-5287},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.00384-12
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    @article{RN231_2012,
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    title = {Monitoring biodegradation of ethene and bioremediation of chlorinated ethenes at a contaminated site using compound-specific isotope analysis (CSIA)},
    journal = {Environmental Science and Technology},
    volume = {46},
    number = {3},
    pages = {1731-1738},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/es202792x},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84856715876&doi=10.1021%2fes202792x&partnerID=40&md5=621ca940a814bef24d85edce2ff14a08},
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    [Bibtex]
    @article{RN688_2012,
    author = {Oshinowo, T. and Diosady, L. L. and Yusufali, R. and Wesley, A. S.},
    title = {Production of iron premix for the fortification of table salt},
    journal = {International Journal of Food Engineering},
    volume = {8},
    number = {3},
    ISSN = {15563758 (ISSN)},
    DOI = {10.1515/1556-3758.1284},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84870549382&doi=10.1515%2f1556-3758.1284&partnerID=40&md5=74fb556c3dc988aebba06a25bc30e154},
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    [Bibtex]
    @article{RN499_2012,
    author = {Paz, A. C. and Javaherian, S. and McGuigan, A. P.},
    title = {Micropatterning co-cultures of epithelial cells on filter insert substrates},
    journal = {Journal of Epithelial Biology and Pharmacology},
    volume = {5},
    pages = {77-85},
    ISSN = {18750443 (ISSN)},
    DOI = {10.2174/1875044301205010077},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84856604819&doi=10.2174%2f1875044301205010077&partnerID=40&md5=2e925864db690bfa9307486a37975778},
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    [Bibtex]
    @article{RN938_2012,
    author = {Porebski, P. J. and Klimecka, M. and Chruszcz, M. and Nicholls, R. A. and Murzyn, K. and Cuff, M. E. and Xu, X. and Cymborowski, M. and Murshudov, G. N. and Savchenko, A. and Edwards, A. and Minor, W.},
    title = {Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members},
    journal = {FEBS Journal},
    volume = {279},
    number = {6},
    pages = {1093-1105},
    ISSN = {1742464X (ISSN)},
    DOI = {10.1111/j.1742-4658.2012.08506.x},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84862804236&doi=10.1111%2fj.1742-4658.2012.08506.x&partnerID=40&md5=bc32b7cf860c978a99f35315bd248a64},
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    [Bibtex]
    @article{RN646_2012,
    author = {Sanscartier, D. and MacLean, H. L. and Saville, B.},
    title = {Electricity production from anaerobic digestion of household organic waste in Ontario: Techno-economic and GHG emission analyses},
    journal = {Environmental Science and Technology},
    volume = {46},
    number = {2},
    pages = {1233-1242},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/es2016268},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84855952345&doi=10.1021%2fes2016268&partnerID=40&md5=cc8b62004c69ac80993f5ac3c170c3c6},
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    [Bibtex]
    @article{RN933_2012,
    author = {Shabalin, I. G. and Porebski, P. J. and Cooper, D. R. and Grabowski, M. and Onopriyenko, O. and Grimshaw, S. and Savchenko, A. and Chruszcz, M. and Minor, W.},
    title = {Structure of anabolic ornithine carbamoyltransferase from Campylobacter jejuni at 2.7 Å resolution},
    journal = {Acta Crystallographica Section F: Structural Biology and Crystallization Communications},
    volume = {68},
    number = {9},
    pages = {1018-1024},
    ISSN = {17443091 (ISSN)},
    DOI = {10.1107/S1744309112031259},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84865785700&doi=10.1107%2fS1744309112031259&partnerID=40&md5=ed8828c669cd42bfe978902a9d52667d},
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    [Bibtex]
    @article{RN941_2012,
    author = {Singer, A. U. and Wu, B. and Yee, A. and Houliston, S. and Xu, X. and Cui, H. and Skarina, T. and Garcia, M. and Semesi, A. and Arrowsmith, C. H. and Savchenko, A.},
    title = {Structural analysis of HopPmaL reveals the presence of a second adaptor domain common to the HopAB family of Pseudomonas syringae type III effectors},
    journal = {Biochemistry},
    volume = {51},
    number = {1},
    pages = {1-3},
    ISSN = {00062960 (ISSN)},
    DOI = {10.1021/bi2013883},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84863014802&doi=10.1021%2fbi2013883&partnerID=40&md5=d64c1a2d62a09110d4a29b1bea5c59c1},
    year = {2012},
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    [Bibtex]
    @article{RN498_2012,
    author = {Soleas, J. P. and Paz, A. and Marcus, P. and McGuigan, A. and Waddell, T. K.},
    title = {Engineering airway epithelium},
    journal = {Journal of Biomedicine and Biotechnology},
    volume = {2012},
    ISSN = {11107243 (ISSN)},
    DOI = {10.1155/2012/982971},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84858146350&doi=10.1155%2f2012%2f982971&partnerID=40&md5=fda11e7ba7be1d6d5d7c71b99b07b882},
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    [Bibtex]
    @article{RN349_2012,
    author = {Suzuki, H. and MacDonald, J. and Syed, K. and Salamov, A. and Hori, C. and Aerts, A. and Henrissat, B. and Wiebenga, A. and vanKuyk, P. A. and Barry, K. and Lindquist, E. and LaButti, K. and Lapidus, A. and Lucas, S. and Coutinho, P. and Gong, Y. and Samejima, M. and Mahadevan, R. and Abou-Zaid, M. and de Vries, R. P. and Igarashi, K. and Yadav, J. S. and Grigoriev, I. V. and Master, E. R.},
    title = {Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize},
    journal = {BMC Genomics},
    volume = {13},
    number = {1},
    ISSN = {14712164 (ISSN)},
    DOI = {10.1186/1471-2164-13-444},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84865540130&doi=10.1186%2f1471-2164-13-444&partnerID=40&md5=8f159999b39382a8e0a7f84a1a71483b},
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    @article{RN691_2012,
    author = {Tabtabaei, S. and Diosady, L. L.},
    title = {The isolation of yellow mustard oil using water and cyclic ethers},
    journal = {JAOCS, Journal of the American Oil Chemists' Society},
    volume = {89},
    number = {5},
    pages = {935-945},
    ISSN = {0003021X (ISSN)},
    DOI = {10.1007/s11746-011-1971-0},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84861692163&doi=10.1007%2fs11746-011-1971-0&partnerID=40&md5=b35e6b521a4285f09f176ad0a6c6332d},
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    @article{RN224_2012,
    author = {Tang, S. and Gong, Y. and Edwards, E. A.},
    title = {Semi-automatic in silico gap closure enabled de novo assembly of two Dehalobacter genomes from metagenomic data},
    journal = {PLoS ONE},
    volume = {7},
    number = {12},
    ISSN = {19326203 (ISSN)},
    DOI = {10.1371/journal.pone.0052038},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84871353227&doi=10.1371%2fjournal.pone.0052038&partnerID=40&md5=8e0d6f37c2f2299e49d8c3cdffccdf3a},
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    [Bibtex]
    @article{RN807_2012,
    author = {Tchigvintsev, A. and Singer, A. and Brown, G. and Flick, R. and Evdokimova, E. and Tan, K. and Gonzalez, C. F. and Savchenko, A. and Yakunin, A. F.},
    title = {Biochemical and structural studies of uncharacterized protein PA0743 from Pseudomonas aeruginosa revealed NAD +-dependent L-Serine dehydrogenase},
    journal = {Journal of Biological Chemistry},
    volume = {287},
    number = {3},
    pages = {1874-1883},
    ISSN = {00219258 (ISSN)},
    DOI = {10.1074/jbc.M111.294561},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84863398742&doi=10.1074%2fjbc.M111.294561&partnerID=40&md5=96551a3959f676a16b3e86c6f5727b90},
    year = {2012},
    type = {Journal Article}
    }
  • [DOI] A. Y. L. Tsai, T. Canam, A. Gorzsás, E. J. Mellerowicz, M. M. Campbell, and E. R. Master, “Constitutive expression of a fungal glucuronoyl esterase in arabidopsis reveals altered cell wall composition and structure,” Plant biotechnology journal, vol. 10, iss. 9, pp. 1077-1087, 2012.
    [Bibtex]
    @article{RN348_2012,
    author = {Tsai, A. Y. L. and Canam, T. and Gorzsás, A. and Mellerowicz, E. J. and Campbell, M. M. and Master, E. R.},
    title = {Constitutive expression of a fungal glucuronoyl esterase in Arabidopsis reveals altered cell wall composition and structure},
    journal = {Plant Biotechnology Journal},
    volume = {10},
    number = {9},
    pages = {1077-1087},
    ISSN = {14677644 (ISSN)},
    DOI = {10.1111/j.1467-7652.2012.00735.x},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84868541084&doi=10.1111%2fj.1467-7652.2012.00735.x&partnerID=40&md5=58cb98878819600a0b04ae4ce4d1d060},
    year = {2012},
    type = {Journal Article}
    }
  • [DOI] D. D. Wagner, L. A. Hug, J. K. Hatt, M. R. Spitzmiller, E. Padilla-Crespo, K. M. Ritalahti, E. A. Edwards, K. T. Konstantinidis, and F. E. Löffler, “Genomic determinants of organohalide-respiration in geobacter lovleyi, an unusual member of the geobacteraceae,” Bmc genomics, vol. 13, iss. 1, 2012.
    [Bibtex]
    @article{RN229_2012,
    author = {Wagner, D. D. and Hug, L. A. and Hatt, J. K. and Spitzmiller, M. R. and Padilla-Crespo, E. and Ritalahti, K. M. and Edwards, E. A. and Konstantinidis, K. T. and Löffler, F. E.},
    title = {Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae},
    journal = {BMC Genomics},
    volume = {13},
    number = {1},
    ISSN = {14712164 (ISSN)},
    DOI = {10.1186/1471-2164-13-200},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84861217829&doi=10.1186%2f1471-2164-13-200&partnerID=40&md5=b895061f6703a2e03ee94a80c9dc5278},
    year = {2012},
    type = {Journal Article}
    }
  • [DOI] A. S. Waller, L. A. Hug, K. Mo, D. R. Radford, K. L. Maxwell, and E. A. Edwards, “Transcriptional analysis of a dehalococcoides-containing microbial consortium reveals prophage activation,” Applied and environmental microbiology, vol. 78, iss. 4, pp. 1178-1186, 2012.
    [Bibtex]
    @article{RN232_2012,
    author = {Waller, A. S. and Hug, L. A. and Mo, K. and Radford, D. R. and Maxwell, K. L. and Edwards, E. A.},
    title = {Transcriptional analysis of a Dehalococcoides-containing microbial consortium reveals prophage activation},
    journal = {Applied and Environmental Microbiology},
    volume = {78},
    number = {4},
    pages = {1178-1186},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.06416-11},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84857080584&doi=10.1128%2fAEM.06416-11&partnerID=40&md5=51cd4232618f792752423047fad7cbcc},
    year = {2012},
    type = {Journal Article}
    }
  • [DOI] D. Yadava, Y. Olive Li, L. L. Diosady, and A. S. Wesley, “Optimisation of polymer coating process for microencapsulating ferrous fumarate for salt double fortification with iodine and iron,” Journal of microencapsulation, vol. 29, iss. 8, pp. 729-738, 2012.
    [Bibtex]
    @article{RN690_2012,
    author = {Yadava, D. and Olive Li, Y. and Diosady, L. L. and Wesley, A. S.},
    title = {Optimisation of polymer coating process for microencapsulating ferrous fumarate for salt double fortification with iodine and iron},
    journal = {Journal of Microencapsulation},
    volume = {29},
    number = {8},
    pages = {729-738},
    ISSN = {02652048 (ISSN)},
    DOI = {10.3109/02652048.2011.651493},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84869415746&doi=10.3109%2f02652048.2011.651493&partnerID=40&md5=0e164c1d3f2316816744b6d9494ac7c3},
    year = {2012},
    type = {Journal Article}
    }
  • [DOI] H. Zheng, E. V. Filippova, K. L. Tkaczuk, P. Dworzynski, M. Chruszcz, P. J. Porebski, Z. Wawrzak, O. Onopriyenko, M. Kudritska, S. Grimshaw, A. Savchenko, W. F. Anderson, and W. Minor, “Crystal structures of putative phosphoglycerate kinases from b. anthracis and c. jejuni,” Journal of structural and functional genomics, vol. 13, iss. 1, pp. 15-26, 2012.
    [Bibtex]
    @article{RN939_2012,
    author = {Zheng, H. and Filippova, E. V. and Tkaczuk, K. L. and Dworzynski, P. and Chruszcz, M. and Porebski, P. J. and Wawrzak, Z. and Onopriyenko, O. and Kudritska, M. and Grimshaw, S. and Savchenko, A. and Anderson, W. F. and Minor, W.},
    title = {Crystal structures of putative phosphoglycerate kinases from B. anthracis and C. jejuni},
    journal = {Journal of Structural and Functional Genomics},
    volume = {13},
    number = {1},
    pages = {15-26},
    ISSN = {1345711X (ISSN)},
    DOI = {10.1007/s10969-012-9131-9},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84858705206&doi=10.1007%2fs10969-012-9131-9&partnerID=40&md5=607244f1fe334b70060533c3bfdafc1f},
    year = {2012},
    type = {Journal Article}
    }
  • [DOI] K. Zhuang, E. Ma, D. R. Lovley, and R. Mahadevan, “The design of long-term effective uranium bioremediation strategy using a community metabolic model,” Biotechnology and bioengineering, vol. 109, iss. 10, pp. 2475-2483, 2012.
    [Bibtex]
    @article{RN414_2012,
    author = {Zhuang, K. and Ma, E. and Lovley, D. R. and Mahadevan, R.},
    title = {The design of long-term effective uranium bioremediation strategy using a community metabolic model},
    journal = {Biotechnology and Bioengineering},
    volume = {109},
    number = {10},
    pages = {2475-2483},
    ISSN = {00063592 (ISSN)},
    DOI = {10.1002/bit.24528},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84865358026&doi=10.1002%2fbit.24528&partnerID=40&md5=b2d318e40b59ed73ce4df7d941d172d2},
    year = {2012},
    type = {Journal Article}
    }

2011

  • [DOI] M. Babu, N. Beloglazova, R. Flick, C. Graham, T. Skarina, B. Nocek, A. Gagarinova, O. Pogoutse, G. Brown, A. Binkowski, S. Phanse, A. Joachimiak, E. V. Koonin, A. Savchenko, A. Emili, J. Greenblatt, A. M. Edwards, and A. F. Yakunin, “A dual function of the crispr-cas system in bacterial antivirus immunity and dna repair,” Molecular microbiology, vol. 79, iss. 2, pp. 484-502, 2011.
    [Bibtex]
    @article{RN816_2011,
    author = {Babu, M. and Beloglazova, N. and Flick, R. and Graham, C. and Skarina, T. and Nocek, B. and Gagarinova, A. and Pogoutse, O. and Brown, G. and Binkowski, A. and Phanse, S. and Joachimiak, A. and Koonin, E. V. and Savchenko, A. and Emili, A. and Greenblatt, J. and Edwards, A. M. and Yakunin, A. F.},
    title = {A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair},
    journal = {Molecular Microbiology},
    volume = {79},
    number = {2},
    pages = {484-502},
    ISSN = {0950382X (ISSN)},
    DOI = {10.1111/j.1365-2958.2010.07465.x},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78651083184&doi=10.1111%2fj.1365-2958.2010.07465.x&partnerID=40&md5=e2a30f02bba3e9427821cafb05b1fb13},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] N. Beloglazova, P. Petit, R. Flick, G. Brown, A. Savchenko, and A. F. Yakunin, “Structure and activity of the cas3 hd nuclease mj0384, an effector enzyme of the crispr interference,” Embo journal, vol. 30, iss. 22, pp. 4616-4627, 2011.
    [Bibtex]
    @article{RN808_2011,
    author = {Beloglazova, N. and Petit, P. and Flick, R. and Brown, G. and Savchenko, A. and Yakunin, A. F.},
    title = {Structure and activity of the Cas3 HD nuclease MJ0384, an effector enzyme of the CRISPR interference},
    journal = {EMBO Journal},
    volume = {30},
    number = {22},
    pages = {4616-4627},
    ISSN = {02614189 (ISSN)},
    DOI = {10.1038/emboj.2011.377},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-81255160844&doi=10.1038%2femboj.2011.377&partnerID=40&md5=52e12f6224891dce313ae59e867d67ae},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] E. Bester, O. Kroukamp, M. Hausner, E. A. Edwards, and G. M. Wolfaardt, “Biofilm form and function: carbon availability affects biofilm architecture, metabolic activity and planktonic cell yield,” Journal of applied microbiology, vol. 110, iss. 2, pp. 387-398, 2011.
    [Bibtex]
    @article{RN240_2011,
    author = {Bester, E. and Kroukamp, O. and Hausner, M. and Edwards, E. A. and Wolfaardt, G. M.},
    title = {Biofilm form and function: Carbon availability affects biofilm architecture, metabolic activity and planktonic cell yield},
    journal = {Journal of Applied Microbiology},
    volume = {110},
    number = {2},
    pages = {387-398},
    ISSN = {13645072 (ISSN)},
    DOI = {10.1111/j.1365-2672.2010.04894.x},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78650993911&doi=10.1111%2fj.1365-2672.2010.04894.x&partnerID=40&md5=dde7088965f7207482e541d3cd13aee5},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] P. W. Y. Chan, A. F. Yakunin, E. A. Edwards, and E. F. Pai, “Mapping the reaction coordinates of enzymatic defluorination,” Journal of the american chemical society, vol. 133, iss. 19, pp. 7461-7468, 2011.
    [Bibtex]
    @article{RN238_2011,
    author = {Chan, P. W. Y. and Yakunin, A. F. and Edwards, E. A. and Pai, E. F.},
    title = {Mapping the reaction coordinates of enzymatic defluorination},
    journal = {Journal of the American Chemical Society},
    volume = {133},
    number = {19},
    pages = {7461-7468},
    ISSN = {00027863 (ISSN)},
    DOI = {10.1021/ja200277d},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79955928285&doi=10.1021%2fja200277d&partnerID=40&md5=12446b318f5fc301ee6eca1ee8f1a10a},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] W. W. M. Chan, A. Grostern, F. E. Löffler, and E. A. Edwards, “Quantifying the effects of 1,1,1-trichloroethane and 1,1-dichloroethane on chlorinated ethene reductive dehalogenases,” Environmental science and technology, vol. 45, iss. 22, pp. 9693-9702, 2011.
    [Bibtex]
    @article{RN233_2011,
    author = {Chan, W. W. M. and Grostern, A. and Löffler, F. E. and Edwards, E. A.},
    title = {Quantifying the effects of 1,1,1-trichloroethane and 1,1-dichloroethane on chlorinated ethene reductive dehalogenases},
    journal = {Environmental Science and Technology},
    volume = {45},
    number = {22},
    pages = {9693-9702},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/es201260n},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-81055124288&doi=10.1021%2fes201260n&partnerID=40&md5=fc353553c704775a26c12adb4d8d33f5},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] M. F. Clasquin, E. Melamud, A. Singer, J. R. Gooding, X. Xu, A. Dong, H. Cui, S. R. Campagna, A. Savchenko, A. F. Yakunin, J. D. Rabinowitz, and A. A. Caudy, “Riboneogenesis in yeast,” Cell, vol. 145, iss. 6, pp. 969-980, 2011.
    [Bibtex]
    @article{RN812_2011,
    author = {Clasquin, M. F. and Melamud, E. and Singer, A. and Gooding, J. R. and Xu, X. and Dong, A. and Cui, H. and Campagna, S. R. and Savchenko, A. and Yakunin, A. F. and Rabinowitz, J. D. and Caudy, A. A.},
    title = {Riboneogenesis in yeast},
    journal = {Cell},
    volume = {145},
    number = {6},
    pages = {969-980},
    ISSN = {00928674 (ISSN)},
    DOI = {10.1016/j.cell.2011.05.022},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79958281553&doi=10.1016%2fj.cell.2011.05.022&partnerID=40&md5=6131f82cf730a49ff7ef3ed25f80a8d3},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] C. N. Deshpande, S. J. Harrop, Y. Boucher, K. A. Hassan, R. D. Leo, X. Xu, H. Cui, A. Savchenko, C. Chang, M. Labbate, I. T. Paulsen, H. W. Stokes, P. M. G. Curmi, and B. C. Mabbutt, “Crystal structure of an integron gene cassette-associated protein from vibrio cholerae identifies a cationic drug-binding module,” Plos one, vol. 6, iss. 3, 2011.
    [Bibtex]
    @article{RN950_2011,
    author = {Deshpande, C. N. and Harrop, S. J. and Boucher, Y. and Hassan, K. A. and Leo, R. D. and Xu, X. and Cui, H. and Savchenko, A. and Chang, C. and Labbate, M. and Paulsen, I. T. and Stokes, H. W. and Curmi, P. M. G. and Mabbutt, B. C.},
    title = {Crystal structure of an integron gene cassette-associated protein from Vibrio cholerae identifies a cationic drug-binding module},
    journal = {PLoS ONE},
    volume = {6},
    number = {3},
    ISSN = {19326203 (ISSN)},
    DOI = {10.1371/journal.pone.0016934},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79952301995&doi=10.1371%2fjournal.pone.0016934&partnerID=40&md5=190c36a446ce2fff1b4d0e6808016cf2},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] S. Di Risio, C. S. Hu, B. A. Saville, D. Liao, and J. Lortie, “Large-scale, high-solids enzymatic hydrolysis of steam-exploded poplar,” Biofuels, bioproducts and biorefining, vol. 5, iss. 6, pp. 609-620, 2011.
    [Bibtex]
    @article{RN647_2011,
    author = {Di Risio, S. and Hu, C. S. and Saville, B. A. and Liao, D. and Lortie, J.},
    title = {Large-scale, high-solids enzymatic hydrolysis of steam-exploded poplar},
    journal = {Biofuels, Bioproducts and Biorefining},
    volume = {5},
    number = {6},
    pages = {609-620},
    ISSN = {1932104X (ISSN)},
    DOI = {10.1002/bbb.323},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-81255171228&doi=10.1002%2fbbb.323&partnerID=40&md5=8cd569ab81558e69e7f211cc2f7343cb},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] T. Eckert, B. Brunner, E. A. Edwards, and U. G. Wortmann, “Microbially mediated re-oxidation of sulfide during dissimilatory sulfate reduction by desulfobacter latus,” Geochimica et cosmochimica acta, vol. 75, iss. 12, pp. 3469-3485, 2011.
    [Bibtex]
    @article{RN236_2011,
    author = {Eckert, T. and Brunner, B. and Edwards, E. A. and Wortmann, U. G.},
    title = {Microbially mediated re-oxidation of sulfide during dissimilatory sulfate reduction by Desulfobacter latus},
    journal = {Geochimica et Cosmochimica Acta},
    volume = {75},
    number = {12},
    pages = {3469-3485},
    ISSN = {00167037 (ISSN)},
    DOI = {10.1016/j.gca.2011.03.034},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79955385307&doi=10.1016%2fj.gca.2011.03.034&partnerID=40&md5=63bcb0ef927e996717fa68cf4df2d526},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] L. A. Edwards, M. Lucas, E. A. Edwards, F. Torrente, R. B. Heuschkel, N. J. Klein, S. H. Murch, M. Bajaj-Elliott, and A. D. Phillips, “Aberrant response to commensal bacteroides thetaiotaomicron in crohn’s disease: an ex vivo human organ culture study,” Inflammatory bowel diseases, vol. 17, iss. 5, pp. 1201-1208, 2011.
    [Bibtex]
    @article{RN239_2011,
    author = {Edwards, L. A. and Lucas, M. and Edwards, E. A. and Torrente, F. and Heuschkel, R. B. and Klein, N. J. and Murch, S. H. and Bajaj-Elliott, M. and Phillips, A. D.},
    title = {Aberrant response to commensal Bacteroides thetaiotaomicron in Crohn's disease: An ex vivo human organ culture study},
    journal = {Inflammatory Bowel Diseases},
    volume = {17},
    number = {5},
    pages = {1201-1208},
    ISSN = {10780998 (ISSN)},
    DOI = {10.1002/ibd.21501},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79953874298&doi=10.1002%2fibd.21501&partnerID=40&md5=67b33c2c4bd619136749efb0c5d88e75},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] A. Eshaghi, S. N. Patel, A. Sarabia, R. R. Higgins, A. Savchenko, P. J. Stojios, Y. Li, N. Bastien, D. C. Alexander, D. E. Low, and J. B. Gubbay, “Multidrug-resistant pandemic (h1n1) 2009 infection in immunocompetent child,” Emerging infectious diseases, vol. 17, iss. 8, pp. 1472-1474, 2011.
    [Bibtex]
    @article{RN1031_2011,
    author = {Eshaghi, A. and Patel, S. N. and Sarabia, A. and Higgins, R. R. and Savchenko, A. and Stojios, P. J. and Li, Y. and Bastien, N. and Alexander, D. C. and Low, D. E. and Gubbay, J. B.},
    title = {Multidrug-resistant pandemic (H1N1) 2009 infection in immunocompetent child},
    journal = {Emerging Infectious Diseases},
    volume = {17},
    number = {8},
    pages = {1472-1474},
    ISSN = {10806040 (ISSN)},
    DOI = {10.3201/eid1708.102004
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    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79960886630&doi=10.3201%2feid1708.102004&partnerID=40&md5=87ade5f0fe489510b2954624bc543ef9},
    year = {2011},
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  • [DOI] Y. Fang, T. D. Scheibe, R. Mahadevan, S. Garg, P. E. Long, and D. R. Lovley, “Direct coupling of a genome-scale microbial in silico model and a groundwater reactive transport model,” Journal of contaminant hydrology, vol. 122, iss. 1-4, pp. 96-103, 2011.
    [Bibtex]
    @article{RN429_2011,
    author = {Fang, Y. and Scheibe, T. D. and Mahadevan, R. and Garg, S. and Long, P. E. and Lovley, D. R.},
    title = {Direct coupling of a genome-scale microbial in silico model and a groundwater reactive transport model},
    journal = {Journal of Contaminant Hydrology},
    volume = {122},
    number = {1-4},
    pages = {96-103},
    ISSN = {01697722 (ISSN)},
    DOI = {10.1016/j.jconhyd.2010.11.007},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79951949741&doi=10.1016%2fj.jconhyd.2010.11.007&partnerID=40&md5=06bc33764db3db81ed566b4d6c007d26},
    year = {2011},
    type = {Journal Article}
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  • [DOI] E. V. Filippova, M. Chruszcz, M. Cymborowski, J. Gu, A. Savchenko, A. Edwards, and W. Minor, “Crystal structure of a putative transcriptional regulator sco0520 from streptomyces coelicolor a3(2) reveals an unusual dimer among tetr family proteins,” Journal of structural and functional genomics, vol. 12, iss. 3, pp. 149-157, 2011.
    [Bibtex]
    @article{RN945_2011,
    author = {Filippova, E. V. and Chruszcz, M. and Cymborowski, M. and Gu, J. and Savchenko, A. and Edwards, A. and Minor, W.},
    title = {Crystal structure of a putative transcriptional regulator SCO0520 from Streptomyces coelicolor A3(2) reveals an unusual dimer among TetR family proteins},
    journal = {Journal of Structural and Functional Genomics},
    volume = {12},
    number = {3},
    pages = {149-157},
    ISSN = {1345711X (ISSN)},
    DOI = {10.1007/s10969-011-9112-4},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80054873723&doi=10.1007%2fs10969-011-9112-4&partnerID=40&md5=035437e9140c97ed9a4611886189b95a},
    year = {2011},
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  • [DOI] M. Foumani, T. V. Vuong, and E. R. Master, “Altered substrate specificity of the gluco-oligosaccharide oxidase from acremonium strictum,” Biotechnology and bioengineering, vol. 108, iss. 10, pp. 2261-2269, 2011.
    [Bibtex]
    @article{RN356_2011,
    author = {Foumani, M. and Vuong, T. V. and Master, E. R.},
    title = {Altered substrate specificity of the gluco-oligosaccharide oxidase from Acremonium strictum},
    journal = {Biotechnology and Bioengineering},
    volume = {108},
    number = {10},
    pages = {2261-2269},
    ISSN = {00063592 (ISSN)},
    DOI = {10.1002/bit.23149},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80051784157&doi=10.1002%2fbit.23149&partnerID=40&md5=c4df453ba39d7698064049d1a26e77be},
    year = {2011},
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  • [DOI] R. E. Goacher, G. Drajeremic, and E. R. Master, “Expanding the library of secondary ions that distinguish lignin and polysaccharides in time-of-flight secondary ion mass spectrometry analysis of wood,” Analytical chemistry, vol. 83, iss. 3, pp. 804-812, 2011.
    [Bibtex]
    @article{RN358_2011,
    author = {Goacher, R. E. and Drajeremic, G. and Master, E. R.},
    title = {Expanding the library of secondary ions that distinguish lignin and polysaccharides in time-of-flight secondary ion mass spectrometry analysis of wood},
    journal = {Analytical Chemistry},
    volume = {83},
    number = {3},
    pages = {804-812},
    ISSN = {00032700 (ISSN)},
    DOI = {10.1021/ac1023028},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79952164229&doi=10.1021%2fac1023028&partnerID=40&md5=ad7e68dd3fb59ec7875383c7d88aa00a},
    year = {2011},
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    }
  • [DOI] C. Goode and D. G. Allen, “Effect of calcium on moving-bed biofilm reactor biofilms,” Water environment research, vol. 83, iss. 3, pp. 220-232, 2011.
    [Bibtex]
    @article{RN535_2011,
    author = {Goode, C. and Allen, D. G.},
    title = {Effect of calcium on moving-bed biofilm reactor biofilms},
    journal = {Water Environment Research},
    volume = {83},
    number = {3},
    pages = {220-232},
    ISSN = {10614303 (ISSN)},
    DOI = {10.2175/106143010X12780288628255},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79954520772&doi=10.2175%2f106143010X12780288628255&partnerID=40&md5=a59b2fea686877fa42d8d5d232e41892},
    year = {2011},
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  • [DOI] L. A. Hug, M. Salehi, P. Nuin, E. R. Tillier, and E. A. Edwards, “Design and verification of a pangenome microarray oligonucleotide probe set for dehalococcoides spp,” Applied and environmental microbiology, vol. 77, iss. 15, pp. 5361-5369, 2011.
    [Bibtex]
    @article{RN235_2011,
    author = {Hug, L. A. and Salehi, M. and Nuin, P. and Tillier, E. R. and Edwards, E. A.},
    title = {Design and verification of a pangenome microarray oligonucleotide probe set for Dehalococcoides spp},
    journal = {Applied and Environmental Microbiology},
    volume = {77},
    number = {15},
    pages = {5361-5369},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.00063-11},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79961082938&doi=10.1128%2fAEM.00063-11&partnerID=40&md5=6442d409e9e163ada695e1439de2c522},
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    [Bibtex]
    @article{RN534_2011,
    author = {Irving, T. E. and Allen, D. G.},
    title = {Species and material considerations in the formation and development of microalgal biofilms},
    journal = {Applied Microbiology and Biotechnology},
    volume = {92},
    number = {2},
    pages = {283-294},
    ISSN = {01757598 (ISSN)},
    DOI = {10.1007/s00253-011-3341-0},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-82455209006&doi=10.1007%2fs00253-011-3341-0&partnerID=40&md5=6d34cbf118a5f2e5fe07347605c04fdf},
    year = {2011},
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  • [DOI] S. Javaherian, K. A. O’Donnell, and A. P. McGuigan, “A fast and accessible methodology for micro-patterning cells on standard culture substrates using parafilm inserts,” Plos one, vol. 6, iss. 6, p. e20909, 2011.
    [Bibtex]
    @article{RN1080_2011,
    author = {Javaherian, S. and O'Donnell, K. A. and McGuigan, A. P.},
    title = {A fast and accessible methodology for micro-patterning cells on standard culture substrates using Parafilm inserts},
    journal = {PLoS One},
    volume = {6},
    number = {6},
    pages = {e20909},
    ISSN = {1932-6203 (Electronic) 1932-6203 (Linking)},
    DOI = {10.1371/journal.pone.0020909},
    url = {http://www.ncbi.nlm.nih.gov/pubmed/21687691},
    year = {2011},
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    [Bibtex]
    @article{RN501_2011,
    author = {Javaherian, S. and O'Donnell, K. A. and McGuigan, A. P.},
    title = {A fast and accessible methodology for micro-patterning cells on standard culture substrates using Parafilm™ inserts},
    journal = {PLoS ONE},
    volume = {6},
    number = {6},
    ISSN = {19326203 (ISSN)},
    DOI = {10.1371/journal.pone.0020909},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79958166690&doi=10.1371%2fjournal.pone.0020909&partnerID=40&md5=3496f7a2192812de07f4d613a5b9b225},
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  • [DOI] M. M. Klimecka, M. Chruszcz, J. Font, T. Skarina, I. Shumilin, O. Onopryienko, P. J. Porebski, M. Cymborowski, M. D. Zimmerman, J. Hasseman, I. J. Glomski, L. Lebioda, A. Savchenko, A. Edwards, and W. Minor, “Structural analysis of a putative aminoglycoside n-acetyltransferase from bacillus anthracis,” Journal of molecular biology, vol. 410, iss. 3, pp. 411-423, 2011.
    [Bibtex]
    @article{RN948_2011,
    author = {Klimecka, M. M. and Chruszcz, M. and Font, J. and Skarina, T. and Shumilin, I. and Onopryienko, O. and Porebski, P. J. and Cymborowski, M. and Zimmerman, M. D. and Hasseman, J. and Glomski, I. J. and Lebioda, L. and Savchenko, A. and Edwards, A. and Minor, W.},
    title = {Structural analysis of a putative aminoglycoside N-acetyltransferase from Bacillus anthracis},
    journal = {Journal of Molecular Biology},
    volume = {410},
    number = {3},
    pages = {411-423},
    ISSN = {00222836 (ISSN)},
    DOI = {10.1016/j.jmb.2011.04.076},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79959526866&doi=10.1016%2fj.jmb.2011.04.076&partnerID=40&md5=2058b87b5820ed8f4faba051d8dbd132},
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    [Bibtex]
    @article{RN809_2011,
    author = {Lai, K. K. and Stogios, P. J. and Vu, C. and Xu, X. and Cui, H. and Molloy, S. and Savchenko, A. and Yakunin, A. and Gonzalez, C. F.},
    title = {An inserted α/β subdomain shapes the catalytic pocket of Lactobacillus johnsonii cinnamoyl esterase},
    journal = {PLoS ONE},
    volume = {6},
    number = {8},
    ISSN = {19326203 (ISSN)},
    DOI = {10.1371/journal.pone.0023269},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80051856617&doi=10.1371%2fjournal.pone.0023269&partnerID=40&md5=b9b82da283bc01da0329b970a1a8a66a},
    year = {2011},
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  • [DOI] Y. O. Li, L. L. Diosady, and S. Jankowski, “Folic acid stability in the presence of various formulation components including iron compounds in fortified extruded ultra rice® over prolonged storage at 40 °c and 60% relative humidity (rh),” International journal of food science and technology, vol. 46, iss. 2, pp. 379-385, 2011.
    [Bibtex]
    @article{RN698_2011,
    author = {Li, Y. O. and Diosady, L. L. and Jankowski, S.},
    title = {Folic acid stability in the presence of various formulation components including iron compounds in fortified extruded Ultra Rice® over prolonged storage at 40 °C and 60% relative humidity (RH)},
    journal = {International Journal of Food Science and Technology},
    volume = {46},
    number = {2},
    pages = {379-385},
    ISSN = {09505423 (ISSN)},
    DOI = {10.1111/j.1365-2621.2010.02494.x},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78651355629&doi=10.1111%2fj.1365-2621.2010.02494.x&partnerID=40&md5=31568d576615368f41ed696b114fdb89},
    year = {2011},
    type = {Journal Article}
    }
  • Y. O. Li, L. L. Diosady, and A. S. Wesley, “Folic acid fortification through existing fortified foods: iodized salt and vitamin a-fortified sugar,” Food and nutrition bulletin, vol. 32, iss. 1, pp. 35-41, 2011.
    [Bibtex]
    @article{RN697_2011,
    author = {Li, Y. O. and Diosady, L. L. and Wesley, A. S.},
    title = {Folic acid fortification through existing fortified foods: Iodized salt and vitamin A-fortified sugar},
    journal = {Food and Nutrition Bulletin},
    volume = {32},
    number = {1},
    pages = {35-41},
    ISSN = {03795721 (ISSN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79957844414&partnerID=40&md5=541d9fad222067abf1185bd6a3a772c8},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] Y. O. Li, D. Yadava, K. L. Lo, L. L. Diosady, and A. S. Wesley, “Feasibility and optimization study of using cold-forming extrusion process for agglomerating and microencapsulating ferrous fumarate for salt double fortification with iodine and iron,” Journal of microencapsulation, vol. 28, iss. 7, pp. 639-649, 2011.
    [Bibtex]
    @article{RN694_2011,
    author = {Li, Y. O. and Yadava, D. and Lo, K. L. and Diosady, L. L. and Wesley, A. S.},
    title = {Feasibility and optimization study of using cold-forming extrusion process for agglomerating and microencapsulating ferrous fumarate for salt double fortification with iodine and iron},
    journal = {Journal of Microencapsulation},
    volume = {28},
    number = {7},
    pages = {639-649},
    ISSN = {02652048 (ISSN)},
    DOI = {10.3109/02652048.2011.604434},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80053426980&doi=10.3109%2f02652048.2011.604434&partnerID=40&md5=2fa1ed4740fa6248fc5cf14f470432cb},
    year = {2011},
    type = {Journal Article}
    }
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    [Bibtex]
    @article{RN234_2011,
    author = {Liang, X. and Howlett, M. R. and Nelson, J. L. and Grant, G. and Dworatzek, S. and Lacrampe-Couloume, G. and Zinder, S. H. and Edwards, E. A. and Sherwood Lollar, B.},
    title = {Pathway-dependent isotope fractionation during aerobic and anaerobic degradation of monochlorobenzene and 1,2,4-trichlorobenzene},
    journal = {Environmental Science and Technology},
    volume = {45},
    number = {19},
    pages = {8321-8327},
    ISSN = {0013936X (ISSN)},
    DOI = {10.1021/es201224x},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80053432042&doi=10.1021%2fes201224x&partnerID=40&md5=9b127558c4cb67e2e8483fce21e39da8},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] J. MacDonald, M. Doering, T. Canam, Y. Gong, D. S. Guttman, M. M. Campbell, and E. R. Master, “Transcriptomic responses of the softwood-degrading white-rot fungus phanerochaete carnosa during growth on coniferous and deciduous wood,” Applied and environmental microbiology, vol. 77, iss. 10, pp. 3211-3218, 2011.
    [Bibtex]
    @article{RN357_2011,
    author = {MacDonald, J. and Doering, M. and Canam, T. and Gong, Y. and Guttman, D. S. and Campbell, M. M. and Master, E. R.},
    title = {Transcriptomic responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood},
    journal = {Applied and Environmental Microbiology},
    volume = {77},
    number = {10},
    pages = {3211-3218},
    ISSN = {00992240 (ISSN)},
    DOI = {10.1128/AEM.02490-10},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79958235330&doi=10.1128%2fAEM.02490-10&partnerID=40&md5=e1d1deb694279597fa251ed2acd0669f},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] R. Mahadevan, B. Ø. Palsson, and D. R. Lovley, “Erratum: in situ to in silico and back: elucidating the physiology and ecology of geobacter spp. using genome-scale modelling,” Nature reviews microbiology, vol. 9, iss. 3, p. 222, 2011.
    [Bibtex]
    @article{RN430_2011,
    author = {Mahadevan, R. and Palsson, B. Ø and Lovley, D. R.},
    title = {Erratum: In situ to in silico and back: Elucidating the physiology and ecology of Geobacter spp. using genome-scale modelling},
    journal = {Nature Reviews Microbiology},
    volume = {9},
    number = {3},
    pages = {222},
    ISSN = {17401526 (ISSN)},
    DOI = {10.1038/nrmicro2525},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79951819363&doi=10.1038%2fnrmicro2525&partnerID=40&md5=d6b032ff3233ff9e62bdd61193ac92cb},
    year = {2011},
    type = {Journal Article}
    }
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    [Bibtex]
    @article{RN432_2011,
    author = {Mahadevan, R. and Palsson, B. Ø and Lovley, D. R.},
    title = {In situ to in silico and back: Elucidating the physiology and ecology of Geobacter spp. using genome-scale modelling},
    journal = {Nature Reviews Microbiology},
    volume = {9},
    number = {1},
    pages = {39-50},
    ISSN = {17401526 (ISSN)},
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    [Bibtex]
    @article{RN813_2011,
    author = {Makarova, K. S. and Haft, D. H. and Barrangou, R. and Brouns, S. J. J. and Charpentier, E. and Horvath, P. and Moineau, S. and Mojica, F. J. M. and Wolf, Y. I. and Yakunin, A. F. and Van Der Oost, J. and Koonin, E. V.},
    title = {Evolution and classification of the CRISPR-Cas systems},
    journal = {Nature Reviews Microbiology},
    volume = {9},
    number = {6},
    pages = {467-477},
    ISSN = {17401526 (ISSN)},
    DOI = {10.1038/nrmicro2577},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79956157571&doi=10.1038%2fnrmicro2577&partnerID=40&md5=a668e54fcb4847a9d72b5c990a008138},
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    [Bibtex]
    @article{RN648_2011,
    author = {McKechnie, J. and Zhang, Y. and Ogino, A. and Saville, B. and Sleep, S. and Turner, M. and Pontius, R. and Maclean, H. L.},
    title = {Impacts of co-location, co-production, and process energy source on life cycle energy use and greenhouse gas emissions of lignocellulosic ethanol},
    journal = {Biofuels, Bioproducts and Biorefining},
    volume = {5},
    number = {3},
    pages = {279-292},
    ISSN = {1932104X (ISSN)},
    DOI = {10.1002/bbb.286},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79955910361&doi=10.1002%2fbbb.286&partnerID=40&md5=d1b671a333a397cb788e5a5e7d66dbde},
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    @article{RN237_2011,
    author = {McMurdie, P. J. and Hug, L. A. and Edwards, E. A. and Holmes, S. and Spormann, A. M.},
    title = {Site-specific mobilization of vinyl chloride respiration islands by a mechanism common in Dehalococcoides},
    journal = {BMC Genomics},
    volume = {12},
    ISSN = {14712164 (ISSN)},
    DOI = {10.1186/1471-2164-12-287},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79957817494&doi=10.1186%2f1471-2164-12-287&partnerID=40&md5=2c9233d9a4ac0061833a29018c084ed6},
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    [Bibtex]
    @article{RN951_2011,
    author = {Osipiuk, J. and Xu, X. and Cui, H. and Savchenko, A. and Edwards, A. and Joachimiak, A.},
    title = {Crystal structure of secretory protein Hcp3 from Pseudomonas aeruginosa},
    journal = {Journal of Structural and Functional Genomics},
    volume = {12},
    number = {1},
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    ISSN = {1345711X (ISSN)},
    DOI = {10.1007/s10969-011-9107-1},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79955808709&doi=10.1007%2fs10969-011-9107-1&partnerID=40&md5=b07900fb40fbb77614c1bf350779b5e5},
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    [Bibtex]
    @article{RN423_2011,
    author = {Pandit, A. V. and Mahadevan, R.},
    title = {In silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals},
    journal = {Microbial Cell Factories},
    volume = {10},
    ISSN = {14752859 (ISSN)},
    DOI = {10.1186/1475-2859-10-76},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80053445630&doi=10.1186%2f1475-2859-10-76&partnerID=40&md5=740583e7512b83b74445cbb88b860747},
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    [Bibtex]
    @article{RN500_2011,
    author = {Paz, A. C. and Javaherian, S. and McGuigan, A. P.},
    title = {Tools for micropatterning epithelial cells into microcolonies on transwell filter substrates},
    journal = {Lab on a Chip - Miniaturisation for Chemistry and Biology},
    volume = {11},
    number = {20},
    pages = {3440-3448},
    ISSN = {14730197 (ISSN)},
    DOI = {10.1039/c1lc20506d},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84855997103&doi=10.1039%2fc1lc20506d&partnerID=40&md5=53b8c88d0f3d61b606c8cd0124769834},
    year = {2011},
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    [Bibtex]
    @article{RN422_2011,
    author = {Pinel, D. and Gawand, P. and Mahadevan, R. and Martin, V. J. J.},
    title = {'Omics' technologies and systems biology for engineering Saccharomyces cerevisiae strains for lignocellulosic bioethanol production},
    journal = {Biofuels},
    volume = {2},
    number = {6},
    pages = {659-675},
    ISSN = {17597269 (ISSN)},
    DOI = {10.4155/bfs.11.120},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80455125978&doi=10.4155%2fbfs.11.120&partnerID=40&md5=de890be219a85e962c98a93cc5bbbd2e},
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    [Bibtex]
    @article{RN695_2011,
    author = {Radočaj, O. and Dimić, E. and Diosady, L. L. and Vujasinović, V.},
    title = {Optimizing the texture attributes of a fat-based spread using instrumental measurements},
    journal = {Journal of Texture Studies},
    volume = {42},
    number = {5},
    pages = {394-403},
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    DOI = {10.1111/j.1745-4603.2011.00300.x},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-80053129148&doi=10.1111%2fj.1745-4603.2011.00300.x&partnerID=40&md5=475fd86c6daa499c477a58c21cc6d809},
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    @article{RN811_2011,
    author = {Rangarajan, E. S. and Ruane, K. M. and Proteau, A. and Schrag, J. D. and Valladares, R. and Gonzalez, C. F. and Gilbert, M. and Yakunin, A. F. and Cygler, M.},
    title = {Structural and enzymatic characterization of NanS (YjhS), a 9-O-acetyl N-acetylneuraminic acid esterase from Escherichia coli O157:H7},
    journal = {Protein Science},
    volume = {20},
    number = {7},
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    DOI = {10.1002/pro.649},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79959372165&doi=10.1002%2fpro.649&partnerID=40&md5=5be1cb0a0cd68d42d7d7c532348934ae},
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    [Bibtex]
    @article{RN696_2011,
    author = {Romita, D. and Cheng, Y. L. and Diosady, L. L.},
    title = {Microencapsulation of ferrous fumarate for the production of salt double fortified with iron and iodine},
    journal = {International Journal of Food Engineering},
    volume = {7},
    number = {3},
    ISSN = {15563758 (ISSN)},
    DOI = {10.2202/1556-3758.2122},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79955693471&doi=10.2202%2f1556-3758.2122&partnerID=40&md5=16b86dd91ad198f5cba858feba8553c4},
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    [Bibtex]
    @incollection{RN649,
    author = {Saville, B. A.},
    title = {Pretreatment Options},
    booktitle = {Plant Biomass Conversion},
    publisher = {John Wiley and Sons},
    pages = {199-226},
    ISBN = {9780813816944 (ISBN)},
    DOI = {10.1002/9780470959138.ch9},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-83055174195&doi=10.1002%2f9780470959138.ch9&partnerID=40&md5=bd77e157e1752c013fd7380a210ba3f0},
    year = {2011},
    type = {Book Section}
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    [Bibtex]
    @article{RN942_2011,
    author = {Shakya, T. and Stogios, P. J. and Waglechner, N. and Evdokimova, E. and Ejim, L. and Blanchard, J. E. and McArthur, A. G. and Savchenko, A. and Wright, G. D.},
    title = {A small molecule discrimination map of the antibiotic resistance kinome},
    journal = {Chemistry and Biology},
    volume = {18},
    number = {12},
    pages = {1591-1601},
    ISSN = {10745521 (ISSN)},
    DOI = {10.1016/j.chembiol.2011.10.018},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84555196910&doi=10.1016%2fj.chembiol.2011.10.018&partnerID=40&md5=29e3acdfffa9242199cf263ff797046d},
    year = {2011},
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    [Bibtex]
    @article{RN943_2011,
    author = {Stogios, P. J. and Shakya, T. and Evdokimova, E. and Savchenko, A. and Wright, G. D.},
    title = {Structure and function of APH(4)-Ia, a hygromycin B resistance enzyme},
    journal = {Journal of Biological Chemistry},
    volume = {286},
    number = {49},
    pages = {42786},
    ISSN = {00219258 (ISSN)},
    DOI = {10.1074/jbc.A110.194266},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-82755176622&doi=10.1074%2fjbc.A110.194266&partnerID=40&md5=f85a18e8ad19b11d5b9bc44e6e189867},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] P. J. Stogios, T. Shakya, E. Evdokimova, A. Savchenko, and G. D. Wright, “Structure and function of aph(4)-ia, a hygromycin b resistance enzyme,” Journal of biological chemistry, vol. 286, iss. 3, pp. 1966-1975, 2011.
    [Bibtex]
    @article{RN952_2011,
    author = {Stogios, P. J. and Shakya, T. and Evdokimova, E. and Savchenko, A. and Wright, G. D.},
    title = {Structure and function of APH(4)-Ia, a hygromycin B resistance enzyme},
    journal = {Journal of Biological Chemistry},
    volume = {286},
    number = {3},
    pages = {1966-1975},
    ISSN = {00219258 (ISSN)},
    DOI = {10.1074/jbc.M110.194266},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78751475029&doi=10.1074%2fjbc.M110.194266&partnerID=40&md5=f5c56c0f712283c4ca53c265c4e9bd05},
    year = {2011},
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  • [DOI] M. A. Syed, S. Koyanagi, E. Sharma, M. C. Jobin, A. F. Yakunin, and C. M. Lévesque, “The chromosomal mazef locus of streptococcus mutans encodes a functional type ii toxin-antitoxin addiction system,” Journal of bacteriology, vol. 193, iss. 5, pp. 1122-1130, 2011.
    [Bibtex]
    @article{RN815_2011,
    author = {Syed, M. A. and Koyanagi, S. and Sharma, E. and Jobin, M. C. and Yakunin, A. F. and Lévesque, C. M.},
    title = {The chromosomal mazEF locus of Streptococcus mutans encodes a functional type II toxin-antitoxin addiction system},
    journal = {Journal of Bacteriology},
    volume = {193},
    number = {5},
    pages = {1122-1130},
    ISSN = {00219193 (ISSN)},
    DOI = {10.1128/JB.01114-10},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79951616353&doi=10.1128%2fJB.01114-10&partnerID=40&md5=69f125a4803320230e95e71e5abf5eef},
    year = {2011},
    type = {Journal Article}
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    [Bibtex]
    @article{RN810_2011,
    author = {Tchigvintsev, A. and Singer, A. U. and Flick, R. and Petit, P. and Brown, G. and Evdokimova, E. and Savchenko, A. and Yakunin, A. F.},
    title = {Structure and activity of the Saccharomyces cerevisiae dUTP pyrophosphatase DUT1, an essential housekeeping enzyme},
    journal = {Biochemical Journal},
    volume = {437},
    number = {2},
    pages = {243-253},
    ISSN = {02646021 (ISSN)},
    DOI = {10.1042/BJ20110304},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79959754068&doi=10.1042%2fBJ20110304&partnerID=40&md5=15b4f0a190974237b9bbff1576b3b7fb},
    year = {2011},
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    @article{RN424_2011,
    author = {Usher, J. and Balderas-Hernandez, V. and Quon, P. and Gold, N. D. and Martin, V. J. J. and Mahadevan, R. and Baetz, K.},
    title = {Chemical and synthetic genetic array analysis identifies genes that suppress xylose utilization and fermentation in Saccharomyces cerevisiae},
    journal = {G3: Genes, Genomes, Genetics},
    volume = {1},
    number = {4},
    pages = {247-258},
    ISSN = {21601836 (ISSN)},
    DOI = {10.1534/g3.111.000695},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84873736810&doi=10.1534%2fg3.111.000695&partnerID=40&md5=b862357031e933712324524c851ddf05},
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  • T. V. Vuong, D. B. Wilson, and E. Master, “Engineering thermobifida fusca cellulases: catalytic mechanisms and improved activity,” in Protein engineering: design, selection and applications, Nova Science Publishers, Inc., 2011, pp. 29-51.
    [Bibtex]
    @incollection{RN359,
    author = {Vuong, T. V. and Wilson, D. B. and Master, E.},
    title = {Engineering Thermobifida fusca cellulases: Catalytic mechanisms and improved activity},
    booktitle = {Protein Engineering: Design, Selection and Applications},
    publisher = {Nova Science Publishers, Inc.},
    pages = {29-51},
    ISBN = {9781616682866 (ISBN)},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-84895232866&partnerID=40&md5=89f45f472518d97e34c4e18c70d4fd6d},
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    type = {Book Section}
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    @article{RN428_2011,
    author = {Yang, L. and Cluett, W. R. and Mahadevan, R.},
    title = {EMILiO: A fast algorithm for genome-scale strain design},
    journal = {Metabolic Engineering},
    volume = {13},
    number = {3},
    pages = {272-281},
    ISSN = {10967176 (ISSN)},
    DOI = {10.1016/j.ymben.2011.03.002},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79955145774&doi=10.1016%2fj.ymben.2011.03.002&partnerID=40&md5=edf55b533c6474fd3f1d44fb5617d5da},
    year = {2011},
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    @article{RN425_2011,
    author = {Zhao, J. and Scheibe, T. D. and Mahadevan, R.},
    title = {Model-based analysis of the role of biological, hydrological and geochemical factors affecting uranium bioremediation},
    journal = {Biotechnology and Bioengineering},
    volume = {108},
    number = {7},
    pages = {1537-1548},
    ISSN = {00063592 (ISSN)},
    DOI = {10.1002/bit.23096},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79956121413&doi=10.1002%2fbit.23096&partnerID=40&md5=080692afa185213e3deb81cdf8e8ee89},
    year = {2011},
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    @article{RN431_2011,
    author = {Zhuang, K. and Izallalen, M. and Mouser, P. and Richter, H. and Risso, C. and Mahadevan, R. and Lovley, D. R.},
    title = {Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments},
    journal = {ISME Journal},
    volume = {5},
    number = {2},
    pages = {305-316},
    ISSN = {17517362 (ISSN)},
    DOI = {10.1038/ismej.2010.117},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-78751584992&doi=10.1038%2fismej.2010.117&partnerID=40&md5=31388c07abfbf07848ab0880f2f1b95c},
    year = {2011},
    type = {Journal Article}
    }
  • [DOI] K. Zhuang, G. N. Vemuri, and R. Mahadevan, “Economics of membrane occupancy and respiro-fermentation,” Molecular systems biology, vol. 7, 2011.
    [Bibtex]
    @article{RN426_2011,
    author = {Zhuang, K. and Vemuri, G. N. and Mahadevan, R.},
    title = {Economics of membrane occupancy and respiro-fermentation},
    journal = {Molecular Systems Biology},
    volume = {7},
    ISSN = {17444292 (ISSN)},
    DOI = {10.1038/msb.2011.34},
    url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-79959610766&doi=10.1038%2fmsb.2011.34&partnerID=40&md5=57649a877772d3656c099fc98e87dbac},
    year = {2011},
    type = {Journal Article}
    }